| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 678193 | 121 (0.310) | 12 (0.040) | 7/94 | NT | 10.3% | coding (657/1671 nt) | hscC | Hsp70 family chaperone Hsc62, binds to RpoD and inhibits transcription |
| ? | CP009273 | = 678254 | 108 (0.330) | coding (596/1671 nt) | hscC | Hsp70 family chaperone Hsc62, binds to RpoD and inhibits transcription | |||||
Only 100 of 164 total aligned reads displayed.
ATTTTGCCGCTT‑CCACACAGGCGTACAAGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGCATATGGGTAAAATCTTCGCCACCAAGAAAGTTGTCG > CP009273/678126‑678259 | tttGCCGCTTCCCACACAGGCGTACAAGGCTGCCAGTTCACTCTCGTTAAGCGGGGTCCTGGCGACAt < 1:13739203/68‑1 (MQ=255) gCTT‑CCACACAGGCGTACAAGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCcgcgcg < 1:15521809/68‑1 (MQ=255) tt‑CCGCACAGGCGTACAAGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGtt < 1:22026299/68‑1 (MQ=255) tt‑CCACACAGGCGTACAAGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGtt < 1:2829107/68‑1 (MQ=255) tt‑CCACACAGGCGTACAAGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGtt < 1:24559472/68‑1 (MQ=255) tt‑CCACACAGGCGTACAAGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGtt < 1:26217588/68‑1 (MQ=255) tt‑CCACACAGGCGTACAAGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGtt < 1:2067242/68‑1 (MQ=255) tt‑CCACACAGGCGTACAAGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGtt < 1:1223893/68‑1 (MQ=255) tt‑CCACACAGGCGTACAAGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGtt < 1:8620161/68‑1 (MQ=255) t‑CCACACAGGCGTACAAGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGttt < 1:2137815/68‑1 (MQ=255) t‑CCACACAGGCGTACAAGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGttt < 1:19705844/68‑1 (MQ=255) acaGGCGTACAAGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTaaa > 1:6136397/1‑67 (MQ=255) acaGGCGTACAAGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTaaa > 1:7962052/1‑67 (MQ=255) acaGGCGTACAAGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTaaa > 1:23568673/1‑67 (MQ=255) tgCGTACATGGCTGCCAGTTCACTCTCGTTAAGCGTGTTCCTGGCGACATCCGCGCGTTTTATTACCt < 1:31732256/67‑1 (MQ=255) cGTACAAGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAAcc < 1:23981432/65‑1 (MQ=255) cGTACAAGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCt < 1:3402529/66‑1 (MQ=255) cGTACAAGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTc < 1:21737475/67‑1 (MQ=255) cGTACAAGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCa > 1:22881879/1‑68 (MQ=255) cAAGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGa < 1:10189140/68‑1 (MQ=255) cAAGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGa < 1:4658009/68‑1 (MQ=255) cAAGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGa < 1:14889264/68‑1 (MQ=255) cAAGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGa < 1:14802643/68‑1 (MQ=255) cAAGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGa < 1:23728921/68‑1 (MQ=255) cAAGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGa < 1:6760302/68‑1 (MQ=255) aaGGCTGCCTGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGa > 1:18687558/1‑67 (MQ=255) aaGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGGGGCAacgttggtgggggcgaagattttac > 1:2507818‑M1/1‑42 (MQ=255) aaGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGa > 1:23951439/1‑67 (MQ=255) aaGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGa > 1:23348784/1‑67 (MQ=255) aaGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGAc < 1:19813351/68‑1 (MQ=255) aaGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGAc < 1:14247733/68‑1 (MQ=255) aaGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGAc < 1:12792593/68‑1 (MQ=255) aGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGAcc < 1:6100528/68‑1 (MQ=255) ggCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGa < 1:16254971/65‑1 (MQ=255) gCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCa > 1:11696843/1‑67 (MQ=255) gCTGCCAGTTCACTCTCGTTAAGCGTGGTCCGGGCGGCGactttcttggtggcgaagaattttccgcg > 1:7936802‑M1/1‑39 (MQ=255) cTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCa < 1:11111294/66‑1 (MQ=255) tGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGc < 1:30340234/67‑1 (MQ=255) tGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGc < 1:24886335/67‑1 (MQ=255) tGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGc < 1:25107608/67‑1 (MQ=255) tGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGc < 1:27298853/67‑1 (MQ=255) tGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGc < 1:29381210/67‑1 (MQ=255) tGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGc < 1:30057694/67‑1 (MQ=255) tGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGc < 1:24478147/67‑1 (MQ=255) tGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGc < 1:5279488/67‑1 (MQ=255) tGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGc < 1:7637220/67‑1 (MQ=255) tGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGc < 1:9863328/67‑1 (MQ=255) tGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGc < 1:1911056/67‑1 (MQ=255) tGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGc < 1:17144436/67‑1 (MQ=255) tGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGc < 1:1757156/67‑1 (MQ=255) tGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGc < 1:17885673/67‑1 (MQ=255) tGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGc < 1:12904425/67‑1 (MQ=255) tGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGc < 1:19604671/67‑1 (MQ=255) tGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGc < 1:11874184/67‑1 (MQ=255) tGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGc < 1:22859555/67‑1 (MQ=255) tGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGCa < 1:12879518/68‑1 (MQ=255) tGCCAGTTCACTCTCGTTAAGCGGGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGc < 1:26869087/67‑1 (MQ=255) tCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGCATATggg < 1:21467335/67‑1 (MQ=255) tCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGCATATggg < 1:477667/67‑1 (MQ=255) tCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGCATATggg < 1:28695710/67‑1 (MQ=255) tCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGCATATggg < 1:10203899/67‑1 (MQ=255) tCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGCATATggg < 1:11946351/67‑1 (MQ=255) tCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGCATATggg < 1:31944444/67‑1 (MQ=255) tCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGCATATggg < 1:14761097/67‑1 (MQ=255) tCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGCATATggg < 1:31816254/67‑1 (MQ=255) tCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGCATATggg < 1:3464137/67‑1 (MQ=255) tCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGCATATgg < 1:1403094/66‑1 (MQ=255) tCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGCATATg < 1:1090041/65‑1 (MQ=255) tCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGCATATg < 1:25693126/65‑1 (MQ=255) tCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGCATATGGGt < 1:416141/68‑1 (MQ=255) ctcGTTAAGCGTGGTCCTGGCGCCAactttcttggtggcgaagattttacccatatgctggtcgatga > 1:29032970‑M1/1‑25 (MQ=255) ctcGTTAAGCGTGGTCCTGGCGACAactttgttggtggcgaagattttacgcatatgctggtcgatga > 1:25884937‑M1/1‑25 (MQ=255) tAAGCGTGGTCCTGGCGACAactttcttggtggcgaagattttacccatatgctggtcgatgaggttt > 1:18131936‑M1/1‑20 (MQ=255) tAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGCATATGGGTAAAATCTTc > 1:220908/1‑67 (MQ=255) cGTGGTCCTGGCGACAactttcttggtggcgaagattttacccatatgctggtcgatgaggttttaaa > 1:23296696‑M1/1‑16 (MQ=255) cGTGGTCCTGGCGACAactttcttggtggcgaagattttacccatatgctggtcgatgaggttttaaa > 1:5272519‑M1/1‑16 (MQ=255) cGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGCATATGGGTAAAATCTTCGcca > 1:23190876/1‑67 (MQ=255) gTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGCATATGGGTAAAATCTTCGccacc < 1:8299658/68‑1 (MQ=255) ggTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGCATATGGGTAAAATCTTCGccacca < 1:14513306/67‑1 (MQ=255) ggTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGCATATGGGTAAAATCTTCGccacca < 1:28034204/67‑1 (MQ=255) ccTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGCATATGGGAAAAATCTTCGCCACCAAgca > 1:23805054/1‑66 (MQ=255) tGGCGACAactttcttggtggcgaagattttacccatatgctggtcgatgaggttttaaaacgcgcgg > 1:16832704‑M1/1‑8 (MQ=255) tGGCGACAactttcttggtggcgaagattttacccatatgctggtcgatgaggttttaaaacgcgcgg > 1:28590010‑M1/1‑8 (MQ=255) ggCGACATCCGCGCGTTTTAAAACCTCATCGACCAGCATATGGGTAAAATCTTCGCCACCAAGAAAGt < 1:18326083/68‑1 (MQ=255) ggCGACATCCGCGCGTTTTAAAACCTCATCGACCAGCATATGGGTAAAATCTTCGCCACCAAGAAAGt < 1:24752518/68‑1 (MQ=255) gCGACAactttcttggtggcgaagattttacccatatgctggtcgatgaggttttaaaacgcgcggat > 1:24428221‑M1/1‑6 (MQ=255) cGACAactttcttggtggcgaagattttacccatatgctggtcgattaggttttaaaacgcgcggatg > 1:308318‑M1/1‑5 (MQ=255) cGACAactttcttggtggcgaagattttacccatatgctggtcgatgaggttttaaaacgcgcggatg > 1:30495023‑M1/1‑5 (MQ=255) cGACAactttcttggtggcgaagattttacccatatgctggtcgatgaggttttaaaacgcgcggatg > 1:30390567‑M1/1‑5 (MQ=255) cGACAactttcttggtggcgaagattttacccatatgctggtcgatgaggttttaaaacgcgcggatg > 1:27023060‑M1/1‑5 (MQ=255) cGACAactttcttggtggcgaagattttacccatatgctggtcgatgaggttttaaaacgcgcggatg > 1:9397003‑M1/1‑5 (MQ=255) cGACAactttcttggtggcgaagattttacccatatgctggtcgatgaggttttaaaacgcgcggatg > 1:24027859‑M1/1‑5 (MQ=255) cGACATCCGCGCGTTTTAAAACCTCATCGACCAGCATATgg > 1:28077478/1‑41 (MQ=255) cGACATCCGCGCGTTTTAAAACCTCATCGACCAGCATATGGGTAAAATCTTCGCCACCAAGAAAGTtg < 1:29346516‑M2/68‑3 (MQ=255) gACATCCGCGCGTTTTAAAACCTCATCGACCAGCATATGGGTAAAATCTTCGCCACCAAGAAAGTtgt > 1:24920716‑M2/1‑65 (MQ=255) aCAactttcttggtggcgaagattttacccatatgctggtcgatgaggttttaaaacgcgcggatgtc > 1:18355042‑M1/1‑3 (MQ=255) cATCCGCGCGTTTTAAAACCTCATCGACCAGCATATGGGTAAAATCTTCGCCACCAAGAAAGTtgtcg > 1:30495023‑M2/1‑63 (MQ=255) cATCCGCGCGTTTTAAAACCTCATCGACCAGCATATGGGTAAAATCTTCGCCACCAAGAAAGTtgtcg > 1:27023060‑M2/1‑63 (MQ=255) cATCCGCGCGTTTTAAAACCTCATCGACCAGCATATGGGTAAAATCTTCGCCACCAAGAAAGTtgtcg > 1:26604084‑M2/1‑63 (MQ=255) cATCCGCGCGTTTTAAAACCTCATCGACCAGCATATGGGTAAAATCTTCGCCACCAAGAAAGTggtcg > 1:26590990‑M2/1‑63 (MQ=255) | ATTTTGCCGCTT‑CCACACAGGCGTACAAGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGCATATGGGTAAAATCTTCGCCACCAAGAAAGTTGTCG > CP009273/678126‑678259 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |