| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 1723413 = | 244 (0.630) | 10 (0.030) | 5/94 | NT | 5.3% | coding (70/4617 nt) | lhr | putative ATP‑dependent helicase |
| ? | CP009273 | 1723475 = | 154 (0.480) | coding (132/4617 nt) | lhr | putative ATP‑dependent helicase | |||||
Only 100 of 301 total aligned reads displayed.
GCAGATAATCCAGACCCTTCATCGCTCCTGCCGGACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGCCTTTAAACAGCCGACCGCTGTCCAGCCGCAAACCTGGCATGTGGCGGCGCGAAGCGAAC > CP009273/1723347‑1723479 | gCAGATAATCCAGACCCTTCATCGCTCCTGCCGGACGTGTTTTCACCGGCGACCCGCGACTGGTttct > 1:18127662/1‑68 (MQ=255)gCAGATAATCCAGACCCTTCATCGCTCCTGCCGGACGTGTTTTCACCGGCGACCCGCGACTGGTttct > 1:22970643/1‑68 (MQ=255)gCAGATAATCCAGACCCTTCATCGCTCCTGCCGGACGTGTTTTCACCGGCGACCCGCGACTGGTttct > 1:21864176/1‑68 (MQ=255) cAGATCATCCAGCCCCTTCATCGCTCCTGCCGGACGTGTTTTCACCGGCGACCCGCGACTGGTttct < 1:2875925/67‑1 (MQ=255) ggcgtagagaaatgctgccagcgttttcccggagccggtcggtgcaatcaccagcgcatgttcgcttc < 1:2446690‑M1/4‑1 (MQ=255) ggcgtagagaaatgctgccagcgttttcccggagccggtcggtgcaatcaccagcgcatgttcgcttc < 1:26708667‑M1/4‑1 (MQ=255) ggcgtagagaaatgctgccagcgttttcccggagccggtcggtgcaatcaccagcgcatgttcgcttc < 1:19893888‑M1/4‑1 (MQ=255) ggcgtagagaaatgctgccagcgttttcccggagccggtcggtgcaatcaccagcgcatgttcgcttc < 1:21178140‑M1/4‑1 (MQ=255) ggcgtagagaaatgctgccagcgttttcccggagccggtcggtgcaatcaccagcgcatgttcgcttc < 1:7034979‑M1/4‑1 (MQ=255) gATAATCCAGACCCTTCATCGCTCCTGCCGGACGTGTTTTCACCGGCGACCCGCGACTGGTttcttc > 1:13045022/1‑67 (MQ=255) aTCCAGACCCTTCATCGCTCCTGCCGGACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTcgcg > 1:13346152/1‑66 (MQ=255) aTCCAGACCCTTCATCGCTCCTGCCGGACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGcc < 1:30814243/68‑1 (MQ=255) aTCCAGACCCTTCATCGCTCCTGCCGGACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGcc < 1:31229172/68‑1 (MQ=255) aTCCAGACCCTTCATCGCTCCTGCCGGACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGcc < 1:22692388/68‑1 (MQ=255) aTCCAGACCCTTCATCGCTCCTGCCGGACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGcc < 1:30450248/68‑1 (MQ=255) aTCCAGACCCTTCATCGCTCCTGCCGGACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGcc < 1:26456482/68‑1 (MQ=255) aTCCAGACCCTTCATCGCTCCTGCCGGACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGcc < 1:23622164/68‑1 (MQ=255) aTCCAGACCCTTCATCGCTCCTGCCGGACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGcc < 1:9764976/68‑1 (MQ=255) aTCCAGACCCTTCATCGCTCCTGCCGGACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGcc < 1:16153535/68‑1 (MQ=255) aTCCAGACCCTTCATCGCTCCTGCCGGACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGcc < 1:15570306/68‑1 (MQ=255) aTCCAGACCCTTCATCGCTCCTGCCGGACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGcc < 1:29291616/68‑1 (MQ=255) aTCCAGACCCTTCATCGCTCCTGCCGGACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGcc < 1:6225501/68‑1 (MQ=255) aTCCAGACCCTTCATCGCTCCTGCCGGACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGcc < 1:3983707/68‑1 (MQ=255) tCCAGACCCTTCATCGCTCCTGCCGGACGTGTTTTCACCGGCGACCCGCGCCTGGTTTCTTCGCGCCt > 1:4880627/1‑68 (MQ=255) tCCAGACCCTTCATCGCTCCTGCCGGACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGCCt > 1:29891582/1‑68 (MQ=255) ccAGACCCTTCATCGCTCCTGCCGGACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGCCtt > 1:3966949/1‑68 (MQ=255) ccAGACCCTTCATCGCTCCTGCCGGACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGCCtt > 1:27840148/1‑68 (MQ=255) cAGACCCTTCATCGCTCCTGCCGGACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGCCttt < 1:1565447/68‑1 (MQ=255) aCCCTTCATCGCTCCTGCCGGACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGCCTTTaa > 1:10590409/1‑67 (MQ=255) aCCCTTCATCGCTCCTGCCGGACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGCCTTTaa > 1:7682847/1‑67 (MQ=255) cccTTCATCGCTCCTGCCGGACTTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGCCTTTAAAc > 1:25648359/1‑68 (MQ=255) cccTTCATCGCTCCTGCCGGACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGCCTTTAAAc > 1:25539283/1‑68 (MQ=255) cccTTCATCGCTCCTGCCGGACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGCCTTTAAAc > 1:24189719/1‑68 (MQ=255) cccTTCATCGCTCCTGCCGGACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGCCTTTAAAc > 1:2141106/1‑68 (MQ=255) cccTTCATCGCTCCTGCCGGACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGCCTTTAAAc > 1:5980989/1‑68 (MQ=255) cccTTCATCGCTCCTGCCGGACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGCCTTTAAAc > 1:2080444/1‑68 (MQ=255) cccTTCATCGCTCCTGCCGGACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGCCTTTAAAc > 1:537917/1‑68 (MQ=255) cccTTCATCGCTCCTGCCGGACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGCCTTTAAAc > 1:14604208/1‑68 (MQ=255) cccTTCATCGCTCCTGCCGGACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGCCTTTAAAc > 1:3695433/1‑68 (MQ=255) cccTTCATCGCTCCTGCCGGACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGCCTTTAAAc > 1:16988909/1‑68 (MQ=255) ccTTCATCGCTCCTGCCGGACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGCCTTTAAACa > 1:1623380/1‑68 (MQ=255) ttCATCGCTCCTGCCGGACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGCCTTTAAACAGc < 1:26985761/68‑1 (MQ=255) ttCATCGCTCCTGCCGGACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGCCTTTAAACAGc < 1:29476629/68‑1 (MQ=255) tCGCTCCTGCCGGACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGCCTTTAAACAGCCGa > 1:22429288/1‑67 (MQ=255) tCGCTCCTGCCGGACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGCCTTTAAACAGCCGa > 1:11337639/1‑67 (MQ=255) tCGCTCCTGCCGGACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGCCTTTAAACAGCCGa > 1:7916137/1‑67 (MQ=255) tCGCTCCTGCCGGACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGCCTTTAAACAGCCGa > 1:16783320/1‑67 (MQ=255) cGCTCCTGCCGGACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGCCTTTAAACAGCCGAcc < 1:5044618/68‑1 (MQ=255) cGCTCCTGCCGGACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGCCTTTAAACAGCCGAcc < 1:6601679/68‑1 (MQ=255) gCTCCTGCCGGACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGCCTTTAAACAGCCGAcc > 1:3607751/1‑67 (MQ=255) gCTCCTGCCGGACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGCCTTTAAACAGCCGAcc > 1:20999645/1‑67 (MQ=255) gCTCCTGCCGGACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGCCTTTAAACAGCCGAcc > 1:1936848/1‑67 (MQ=255) gCTCCTGCCGGACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGCCTTTAAACAGCCGAcc > 1:18420795/1‑67 (MQ=255) gCTCCTGCCGGACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGCCTTTAAACAGCCGAcc > 1:7768430/1‑67 (MQ=255) tCCTGCCGGACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGCCTTTAAACAGCCGAcc > 1:28484870/1‑65 (MQ=255) tCCTGCCGGACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGCCTTTAAACAGCCGAcc > 1:28926257/1‑65 (MQ=255) tCCTGCCGGACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGCCTTTAAACAGCCGACCGCt < 1:31994957/68‑1 (MQ=255) tCCTGCCGGACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGCCTTTAAACAGCCGACCGCt < 1:4171490/68‑1 (MQ=255) ccTGCCGGACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGCCTTTAAACAGCCGAcc > 1:29752762/1‑64 (MQ=255) cTGCCGGACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGCCTTTAAACAGCCGACCGCTGt < 1:10430163/68‑1 (MQ=255) cTGCCGGACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGCCTTTAAACAGCCGACCGCTGt < 1:6990516/68‑1 (MQ=255) gCCGGACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGCCTTTAAACCGCCGACCGCTGTcc > 1:27459515/1‑68 (MQ=255) gCCGGACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGCCTTTAAACAGCCGACCGCTGTcc > 1:23960224/1‑68 (MQ=255) cGGACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGCCTTTAAACAGCCGACCGCTGTCCa > 1:15950524/1‑67 (MQ=255) cGGACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGCCTTTAAACAGCCGACCGCTGTCCa > 1:30523517/1‑67 (MQ=255) cGGACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGCCTTTAAACAGCCGACCGCTGTCCa > 1:31864383/1‑67 (MQ=255) cGGACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGCCTTTAAACAGCCGACCGCTGTCCa > 1:12816193/1‑67 (MQ=255) cGGACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGCCTTTAAACAGCCGACCGCTGTCCa > 1:13618344/1‑67 (MQ=255) gACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGCCTTTAAACAGCCGACCGCTGTCCAGcc > 1:10884857/1‑68 (MQ=255) cGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGCCTTTAAACAGCCGACCGCTGTCCAGCCGc > 1:31795494/1‑68 (MQ=255) gtgtTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGCCTTTAAACAGCCGACCGCTGTCCAGCCGCa > 1:31508682/1‑68 (MQ=255) gtTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGCCTTTAAACAGCCGACCGCTGTCCAGCCGCaaa < 1:12484641/68‑1 (MQ=255) gtTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGCCTTTAAACAGCCGACCGCTGTCCAGCCGCaaa < 1:15470730/68‑1 (MQ=255) tttCACCGGCGACCCGCGACTGGTTTCTTCGCGCCTTTAAACAGCCGACCGCTGTCCAGCCGCaaa > 1:11952659/1‑66 (MQ=255) tttCACCGGCGACCCGCGACTGGTTTCTTCGCGCCTTTAAACAGCCGACCGCTGTCCAGCCGCAAAcc < 1:8157083/68‑1 (MQ=255) tttCACCGGCGACCCGCGACTGGTTTCTTCGCGCCTTTAAACAGCCGACCGCTGTCCAGCCGCAAAcc < 1:8642127/68‑1 (MQ=255) tttCACCGGCGACCCGCGACTGGTTTCTTCGCGCCTTTAAACAGCCGACCGCTGTCCAGCCGCAAAcc < 1:14203940/68‑1 (MQ=255) cACCGGCGACCCGCGACTGGTTTCTTCGCGCCTTTAAACAGCCGACCGCTGTCCAGCCGCAAACCTgg < 1:31005149/68‑1 (MQ=255) aCCGGCGACCCGCGACTGGTTTCTTCGCGCCTTTAAACAGCCGACCGCTGTCCAGCCGCAAACCTGGc > 1:8837604/1‑68 (MQ=255) ccGGCGACCCGCGACTGGTTTCTTCGCGCCTTTAAACAGCCGACCGCTGTCCAGCCGCAAACCTGGCa > 1:8438861/1‑68 (MQ=255) ccGGCGACCCGCGACTGGTTTCTTCGCGCCTTTAAACAGCCGACCGCTGTCCAGCCGCAAACCTGGCa > 1:15136765/1‑68 (MQ=255) cGGCGACCCGCGACTGGTTTCTTCGCGCCTTTAAACAGCCGACCGCTGTCCAGCCGCAAACCTGGCAt < 1:2473741/68‑1 (MQ=255) cGACCCGCGACTGGTTTCTTCGCGCCTTTAAACAGCCGACCGCTGTCCAGCCGCAAACCTGGCAtgt < 1:22842837/67‑1 (MQ=255) gACCCGCGACTGGTTTCTTCGCGCCTTTAAACAGCCGACCGCTGTCCAGCCGCAAACCTGGCAtgtg < 1:23781548/67‑1 (MQ=255) gACCCGCGACTGGTTTCTTCGCGCCTTTAAACAGCCGACCGCTGTCCAGCCGCAAACCTGGCAtgtg < 1:11075401/67‑1 (MQ=255) caccagcgcatgttcgCTTCGCGCCTTTAATCAGCCGACCGCTGTCCAGCCGCAAACCTGGCAtgtg < 1:30869307‑M1/51‑1 (MQ=255) ccagcgcatgttcgCTTCGCGCCTTTAAACAGCCGACCGCTGTCCAGCCGCAAACCTGGCATGTggcg < 1:4735110‑M1/54‑1 (MQ=255) gcgACTGGTTTCTTCGCGCCTTTAAACAGCCGACCGCTGTCCAGCCGCAAACCTGGCATGTGgcggcg < 1:20022051/68‑1 (MQ=255) aCTGGTTTCTTCGCGCCTTTAAACAGCCGACCGCTGTCCAGCCGCAAACCTGGCATGTGGCGGCgcga > 1:5118260/1‑68 (MQ=255) aCTGGTTTCTTCGCGCCTTTAAACAGCCGACCGCTGTCCAGCCGCAAACCTGGCATGTGGCGGCgcga > 1:22387149/1‑68 (MQ=255) aCTGGTTTCTTCGCGCCTTTAAACAGCCGACCCCTGTCCAGCCGCAAACCTGGCATGTGGCGGCgcga > 1:12890243/1‑68 (MQ=255) cTGGTTTCTTCGCGCCTTTAAACAGCCGACCGCTGTCCAGCCGCAAACCTGGCATGTGGCGGCgcgaa > 1:9425082/1‑68 (MQ=255) cTGGTTTCTTCGCGCCTTTAAACAGCCGACCGCTGTCCAGCCGCAAACCTGGCATGTGGCGGCgcga < 1:4349187/67‑1 (MQ=255) ttcgCTTCGCGCCTTTAAACAGCCGACCGCTGTCCAGCCGCAAACCTGGCATGTGGCGGCgcgaagcg < 1:11814427‑M1/64‑1 (MQ=255) ttcgCTTCGCGCCTTTAAACAGCCGACCGCTGTCCAGCCGCAAACCTGGCATGTGGCGGCgcgaagcg < 1:10267477‑M1/64‑1 (MQ=255) tttCTTCGCGCCTTTAAACAGCCGACCGCTGTCCAGCCGCAAACCTGGCATGTGGCGGCgcgaagcga > 1:17350999/1‑68 (MQ=255) ttcttcGCGCCTTTAAACAGCCGACCGCTGTCCAGCCGCAAACCTGGCATGTGGCGGCgcgaagcgaa < 1:14046117/68‑1 (MQ=255) ttcttcGCGCCTTTAAACAGCCGACCGCTGTCCAGCCGCAAACCTGGCATGTGGCGGCgcgaagcgaa < 1:18546871/68‑1 (MQ=255) ttcttcGCGCCTTTAAACAGCCGACCGCTGTCCAGCCGCAAACCTGGCATGTGGCGGCgcgaagcgaa < 1:22201474/68‑1 (MQ=255) tcttcGCGCCTTTAAACAGCCGCCCGCTGTCAAGCCGCAAACCTGGCATGTGGCGGCGCGAAGCGAAc > 1:12704319/1‑68 (MQ=255) | GCAGATAATCCAGACCCTTCATCGCTCCTGCCGGACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGCCTTTAAACAGCCGACCGCTGTCCAGCCGCAAACCTGGCATGTGGCGGCGCGAAGCGAAC > CP009273/1723347‑1723479 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |