| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 3999963 | 514 (1.340) | 20 (0.060) | 6/98 | NT | 5.0% | coding (740/1830 nt) | recQ | ATP‑dependent DNA helicase |
| ? | CP009273 | = 4000007 | 304 (0.900) | coding (784/1830 nt) | recQ | ATP‑dependent DNA helicase | |||||
Only 100 of 706 total aligned reads displayed.
ATCAGTTGATGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCGCGGCGGCCTATCATGCCGG > CP009273/3999897‑4000029 | tCAGTTGATGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCcgcgcg < 1:16557444/67‑1 (MQ=255) tGATGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGaaa < 1:30969756/65‑1 (MQ=255) tGATGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGaaa < 1:24199576/65‑1 (MQ=255) tGATGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGaaa < 1:12327594/65‑1 (MQ=255) tGATGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGaaa < 1:20013569/65‑1 (MQ=255) tGATGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGaaa < 1:8481454/65‑1 (MQ=255) tGATGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGaaa < 1:6420051/65‑1 (MQ=255) tGATGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGt < 1:2462283/67‑1 (MQ=255) tGATGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGt < 1:13177356/67‑1 (MQ=255) tGATGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGt < 1:13556561/67‑1 (MQ=255) gATGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTag > 1:3382787/1‑68 (MQ=255) tGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTagaa > 1:26512698/1‑68 (MQ=255) gcgcTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTagaag < 1:20882072/68‑1 (MQ=255) gcgcTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTagaag < 1:5313686/68‑1 (MQ=255) cgcTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTagaag > 1:30373434/1‑67 (MQ=255) cgcTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTagaag > 1:2127689/1‑67 (MQ=255) cgcTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTagaag > 1:9255840/1‑67 (MQ=255) cgcTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGACGCGCGAAAGTagaag > 1:14358351/1‑67 (MQ=255) cgcTACGTGCAGGAACAGAGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTagaag > 1:10464667/1‑67 (MQ=255) gcTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGac < 1:22723307/68‑1 (MQ=255) tACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGaca > 1:26019901/1‑67 (MQ=255) cGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACAcc > 1:3654673/1‑67 (MQ=255) cAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTgc > 1:505745/1‑68 (MQ=255) ggAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTgcgc > 1:11098833/1‑68 (MQ=255) atcAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTgcgcg < 1:25857862/65‑1 (MQ=255) aaCAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTgcgcg > 1:15414592/1‑67 (MQ=255) aaCAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTgcgcg > 1:3140164/1‑67 (MQ=255) aaCAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTgcgcg > 1:15529880/1‑67 (MQ=255) aaCAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTgcgcg < 1:17890019/67‑1 (MQ=255) aaCAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTgcgcg > 1:28331950/1‑67 (MQ=255) aaCAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTgcgcg > 1:3181094/1‑67 (MQ=255) aaCAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTgcgcg > 1:28833108/1‑67 (MQ=255) aaCAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTgcgcg > 1:12742486/1‑67 (MQ=255) aaCAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTgcgcg > 1:29118658/1‑67 (MQ=255) aaCAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTgcgcg > 1:26905530/1‑67 (MQ=255) aaCAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTgcgcg > 1:26740074/1‑67 (MQ=255) aaCAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTgcgcg > 1:21078084/1‑67 (MQ=255) aaCAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTgcgcg > 1:24035057/1‑67 (MQ=255) aaCAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTgcgcg > 1:21591642/1‑67 (MQ=255) aCAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTgcgcg > 1:5735390/1‑66 (MQ=255) aCAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTgcgcg > 1:23814123/1‑66 (MQ=255) aCAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTgcgcg > 1:3926922/1‑66 (MQ=255) aCAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTgcgcg > 1:18718789/1‑66 (MQ=255) aCAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGcc < 1:25552054/68‑1 (MQ=255) aCAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGcc < 1:9066660/68‑1 (MQ=255) ggTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCaaa < 1:724472/67‑1 (MQ=255) ggTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCaaa < 1:13765167/67‑1 (MQ=255) tAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGc < 1:24831149/67‑1 (MQ=255) aaGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCaa > 1:31314779/1‑68 (MQ=255) aGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGaa > 1:30697701/1‑68 (MQ=255) gCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAAtt > 1:8782347/1‑68 (MQ=255) cATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTa > 1:23233192/1‑68 (MQ=255) cATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTa > 1:16112659/1‑68 (MQ=255) aTTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTa > 1:22378958/1‑67 (MQ=255) aTTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTa > 1:12075713/1‑67 (MQ=255) aTTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTa > 1:4408245/1‑67 (MQ=255) tCTACTGCAACAGCCGCGCtaattcccttgctttgcaggcgcgcagcggtgtcttctactttcgcgcg > 1:17039144‑M1/1‑19 (MQ=255) tCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAgcgcg < 1:14520350‑M2/68‑6 (MQ=255) tCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAgcgcg < 1:22928075‑M2/68‑6 (MQ=255) tCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAgcgcg < 1:14823680‑M2/68‑6 (MQ=255) cTACTGCAACAGCCGCGCtaattcccttgctttgcaggcgcgcagcggtgtcttctactttcgcgcg > 1:12201370‑M1/1‑18 (MQ=255) cTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAgcgcgg > 1:10760475‑M2/1‑62 (MQ=255) cTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAgcgcg < 1:20579748‑M2/67‑6 (MQ=255) cTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAgcgcg < 1:4801014‑M2/67‑6 (MQ=255) aCTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCgcggcg > 1:27082337/1‑68 (MQ=255) aCTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCgcggcg > 1:4582249/1‑68 (MQ=255) cTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCGcggcgg < 1:15997442/68‑1 (MQ=255) cTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCGcggcgg < 1:15781756/68‑1 (MQ=255) tGCAACAGCCGCGCGAAAGTCGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCGCggcggc < 1:9687603/68‑1 (MQ=255) tGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGTGCggcggc < 1:13999786/68‑1 (MQ=255) tGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCGcggcggt < 1:1748200/68‑2 (MQ=255) gCAACAGCCGCGCtaattcccttgctttgcaggcgcgcagcggtgtcttgtactttcgcgcggctgtt > 1:19469654‑M1/1‑13 (MQ=255) gCAACAGCCGCGCtaattcccttgctttgcaggcgcgcagcggtgtcttctactttcgcgcggctgtt > 1:10027139‑M1/1‑13 (MQ=255) gCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAg > 1:23705279/1‑46 (MQ=255) gCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTTGCGcggcgg > 1:4115467/1‑66 (MQ=255) gCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCGcggcgg > 1:27614090/1‑66 (MQ=255) gCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCGcggcgg > 1:14998686/1‑66 (MQ=255) gCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCGcggcgg > 1:18053725/1‑66 (MQ=255) aaCAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCGCGTCGGCCTa > 1:6872828/1‑68 (MQ=255) aaCAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCGCGGCGGCCt < 1:7941952/67‑1 (MQ=255) aaCAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCGCGGCGGCCt < 1:32004163/67‑1 (MQ=255) aaCAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCGCGGCGGCCt < 1:2353667/67‑1 (MQ=255) aaCAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCGCGGCGGCCTa > 1:25237157/1‑68 (MQ=255) aaCAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCGCGGCGGCCTa > 1:6286334/1‑68 (MQ=255) aCAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAgcgcggctgttgca > 1:30100679‑M2/1‑54 (MQ=255) cAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCGCGGCGGCCTATc > 1:11639523/1‑68 (MQ=255) aGCCGCGCGAAAGTAGAAGACCCCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCGCGGCGGCCTATCa > 1:18406014/1‑68 (MQ=255) aGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCGCGGCGGCCTATCa > 1:25389061/1‑68 (MQ=255) aGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCGCGGCGGCCTATCa > 1:9577854/1‑68 (MQ=255) gCCGCGCtaattcccttgctttgcaggcgcgcagcggtgtcttctactttcgcgcggctgttgcagta > 1:20396502‑M1/1‑7 (MQ=255) gCCGCGCtaattcccttgctttgcaggcgcgcagcggtgtcttctactttcgcgcggctgttgcagta > 1:12902243‑M1/1‑7 (MQ=255) ccGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCGCGGCGGCCTATCAt > 1:24368053/1‑67 (MQ=255) cgcgcgAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAgcgcggctgttgcagtaga > 1:4826525‑M2/1‑49 (MQ=255) cgcgcgAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCGCGGCGGCCTATCATg > 1:13339638/1‑67 (MQ=255) cgcgCtaattcccttgctttgcaggcgcgcagcggtgtcttctactttcgcgcggctgttgcagtaga < 1:1468928‑M1/68‑64 (MQ=255) cgcgCtaattcccttgctttgcaggcgcgcagcggtgtcttctactttcgcgcggctgttgcagtaga < 1:28125409‑M1/68‑64 (MQ=255) cgcgCtaattcccttgctttgcaggcgcgcagcggtgtcttctactttcgcgcggctgttgcagtaga < 1:10206571‑M1/68‑64 (MQ=255) cgcgCtaattcccttgctttgcaggcgcgcagcggtgtcttctactttcgcgcggctgttgcagtag < 1:21994201‑M1/67‑63 (MQ=255) cgcgCtaattcccttgctttgcaggcgcgcagcggtgtcttctactttcgcgcggctgttgcagtag < 1:29397342‑M1/67‑63 (MQ=255) gcgAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCGCGGCGGCCTATCATGCCgg < 1:29706341/68‑1 (MQ=255) | ATCAGTTGATGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCGCGGCGGCCTATCATGCCGG > CP009273/3999897‑4000029 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |