| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 4306574 = | 158 (0.410) | 13 (0.040) | 10/98 | NT | 8.6% | coding (462/1137 nt) | phnM | ribophosphonate triphosphate hydrolase |
| ? | CP009273 | 4306632 = | 138 (0.410) | coding (404/1137 nt) | phnM | ribophosphonate triphosphate hydrolase | |||||
Only 100 of 253 total aligned reads displayed.
CACCGGCTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGATCATCT > CP009273/4306565‑4306698 | tctgcatctGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCGGCAGTTcgcagcgca < 1:6745232‑M1/59‑1 (MQ=255)cACCGGCTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCGGCAGTTcgcagcgca > 1:17767402/1‑68 (MQ=255)cACCGGCTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCGGCAGTTcgcagcgca > 1:19479579/1‑68 (MQ=255)cACCGGCTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCGGCAGTTcgcagcgca < 1:24462422/68‑1 (MQ=255) ctgcatctgcgctgcgaactgccgcatcacaccacgctgccgctgtttgaaaaactggtgcagcgca < 1:28965762‑M2/1‑1 (MQ=255) tgcatctgcgctgcgaactgccgcatcacaccacgctgccgctgtttgaaaaactggtgcagcgcAGa < 1:7042161‑M2/3‑1 (MQ=255) tgcatctgcgctgcgaactgccgcatcacaccacgctgccgctgtttgaaaaactggtgcagcgcAGa < 1:21413886‑M2/3‑1 (MQ=255) tgcatctgcgctgcgaactgccgcatcacaccacgctgccgctgtttgaaaaactggtgcagcgcAGa < 1:1185711‑M2/3‑1 (MQ=255) ggCTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCGGCAGTTCGCAGCGCAGAt > 1:11840411/1‑67 (MQ=255) gCTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCGGCAGTTCGCAGCGCAGATGc > 1:20763446/1‑68 (MQ=255) gCTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCGGCAGTTCGCAGCGCAGATGc > 1:10725761/1‑68 (MQ=255) gCTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCGGCAGTTCGCAGCGCAGATGc > 1:17996358/1‑68 (MQ=255) tctGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCGGCAGTTCGCAGCGCAGATGCa < 1:23510770‑M1/65‑1 (MQ=255) tctGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCGGCAGTTCGCAGCGCAGATGCa < 1:9092496‑M1/65‑1 (MQ=255) cTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCGGCAGTTCGCAGCGCAGATGCa > 1:10457075/1‑68 (MQ=255) cTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCGGCAGTTCGCAGCGCAGATGCa > 1:25490809/1‑68 (MQ=255) cTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCGGCAGTTCGCAGCGCAGATGCa > 1:29709877/1‑68 (MQ=255) tgcgctgcgaactgccgcatcacaccacgctgccgctgtttgaaaaactggtgcagcgcAGATGCAg > 1:4407345‑M2/60‑67 (MQ=255) CGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCGGCAGTTCGCAGCGCAGATGCAGACg < 1:8610768‑M1/68‑1 (MQ=255) gctgcgaactgccgcatcacaccacgctgccgctgtttgaaaaactggtgcagcgcAGATGCAGACgg > 1:11587046‑M2/57‑68 (MQ=255) TGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCGGCAGTTCGCAGCGCAGATGCAGACGGt > 1:22163814‑M1/1‑67 (MQ=255) gaactgccgcatcacaccacgctgccgctgtttgaaaaactggtgcagcgcAGATGCAGACGGTGCTc > 1:14902129‑M2/52‑68 (MQ=255) tttttCAAACAGCGGCAGCGTGGTGTGATGCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGgcgc > 1:4525637/1‑68 (MQ=255) tttttCAAACAGCGGCAGCGTGGTGTGATGCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGgcgc > 1:12862389/1‑68 (MQ=255) tttttCAAACAGCGGCAGCGTGGTGTGATGCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCCgcgc > 1:22441387/1‑68 (MQ=255) gccgcatcacaccacgctgccgctgtttgaaaaactggtgcagcgcAGATGCAGACGGTGCTCGgcgc > 1:5646164‑M2/47‑68 (MQ=255) tttCAAACAGCGGCAGCGTGGTGTGATGCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCgg < 1:14623059/68‑1 (MQ=255) tttCAAACAGCGGCAGCGTGGTGTGATGCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCgg < 1:26827175/68‑1 (MQ=255) tttCAAACAGCGGCAGCGTGGTGTGATGCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCgg < 1:27600006/68‑1 (MQ=255) atcacaccacgctgccgctgtttgaaaaactggtgcagcgcAGATGCAGACGGTGCTCGGCGCGGTTg > 1:12010618‑M2/42‑68 (MQ=255) aaaCAGCGGCAGCGTGGTGTGATGCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTg > 1:24300130/1‑67 (MQ=255) aaaCAGCGGCAGCGTGGTGTGATGCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTg > 1:29585395/1‑67 (MQ=255) aaaCAGCGGCAGCGTGGTGTGATGCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTg > 1:31309625/1‑67 (MQ=255) aaCAGCGGCAGCGTGGTGTGATGCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGAc > 1:20437827/1‑68 (MQ=255) aCAGCGGCAGCGTGGTGTGATGCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGAc > 1:29395836/1‑67 (MQ=255) aCAGCGGCAGCGTGGTGTGATGCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGAc > 1:31953834/1‑67 (MQ=255) accacgctgccgctgtttgaaaaactggtgcagcgcAGATGCAGACGGTGCTCGGCGCGGTTGAcgcc > 1:16430607‑M2/37‑68 (MQ=255) aGCGGCAGCGTGGTGTGATGCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGAcgcc > 1:4225551/1‑68 (MQ=255) acgctgccgctgtttgaaaaactggtgcagcgcAGATGCAGACGGTGCTCGGCGCGGTTGACGCcgcg > 1:11757990‑M2/34‑68 (MQ=255) gCAGCGTGGTGTGATGCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGt > 1:31434389/1‑68 (MQ=255) gCAGCGTGGTGTGATGCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGt > 1:16728167/1‑68 (MQ=255) aGCGTGGTGTGATGCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGtt > 1:19864277/1‑67 (MQ=255) aGCGTGGTGTGATGCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGtt > 1:22583161/1‑67 (MQ=255) aGCGTGGTGTGATGCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGtt > 1:10006909/1‑67 (MQ=255) gccgctgtttgaaaaactggtgcagcgcAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGtt > 1:27860709‑M2/29‑65 (MQ=255) cGTGGTGTGATGCGGCAGTTCTCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCAGCGtt > 1:15304409/1‑65 (MQ=255) cGTGGTGTGATGCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGtt > 1:26463129/1‑65 (MQ=255) gtggtgTGATGCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCt > 1:11004389/1‑67 (MQ=255) gtggtgTGATGCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCt > 1:6866487/1‑67 (MQ=255) gtggtgTGATGCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCt > 1:25035183/1‑67 (MQ=255) tggtgTGATGCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGc > 1:30494812/1‑68 (MQ=255) tggtgTGATGCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGc > 1:9369080/1‑68 (MQ=255) tgtgATGCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCg > 1:16916760/1‑66 (MQ=255) tgtgATGCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCg > 1:26074034/1‑66 (MQ=255) gtgATGCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGtc > 1:8556779/1‑67 (MQ=255) gtgATGCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGtc > 1:8266659/1‑67 (MQ=255) gATGCGTCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTctct < 1:10643481/68‑1 (MQ=255) gATGCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTctct > 1:23302315/1‑68 (MQ=255) gATGCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTctct > 1:15039283/1‑68 (MQ=255) gATGCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTctct > 1:29781432/1‑68 (MQ=255) gATGCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTctct > 1:29178032/1‑68 (MQ=255) aTGCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTctct > 1:24801666/1‑67 (MQ=255) aTGCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTctct > 1:28938582/1‑67 (MQ=255) tGCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTc < 1:15683598/68‑1 (MQ=255) tGCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTc > 1:13983330/1‑68 (MQ=255) tGCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTc < 1:3181494/68‑1 (MQ=255) gCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCg > 1:8891970/1‑68 (MQ=255) gCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCg > 1:17102599/1‑68 (MQ=255) gCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCg > 1:9867072/1‑68 (MQ=255) gCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCg > 1:16615611/1‑68 (MQ=255) gCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCg > 1:4821826/1‑68 (MQ=255) gCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCg > 1:5022978/1‑68 (MQ=255) gCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCg > 1:15813350/1‑68 (MQ=255) gCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCg > 1:23589064/1‑68 (MQ=255) gCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCg > 1:21808010/1‑68 (MQ=255) gCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCg > 1:18902025/1‑68 (MQ=255) gCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCg > 1:25273509/1‑68 (MQ=255) gCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCg > 1:27089366/1‑68 (MQ=255) gCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCg > 1:21310214/1‑68 (MQ=255) ggCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGAt > 1:1818952/1‑68 (MQ=255) ggCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGAt > 1:3851688/1‑68 (MQ=255) ggCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGAt > 1:7844928/1‑68 (MQ=255) gCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATg > 1:9210886/1‑68 (MQ=255) aGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATgg < 1:23366860/67‑1 (MQ=255) aGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGc > 1:13577195/1‑68 (MQ=255) aGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGc > 1:8208647/1‑68 (MQ=255) aGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGc > 1:7708405/1‑68 (MQ=255) aGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGc > 1:17587736/1‑68 (MQ=255) aGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCATCTCTTCGATGGc > 1:12970326/1‑68 (MQ=255) cgcagcgcagATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGttt < 1:5322358/46‑1 (MQ=255) agcgcAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGat < 1:28044856‑M2/62‑1 (MQ=255) agcgcAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGat < 1:1311698‑M2/62‑1 (MQ=255) gcgcAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGatca > 1:30235622‑M2/5‑68 (MQ=255) gcgcAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGatca > 1:28207086‑M2/5‑68 (MQ=255) gcAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGatca > 1:24536132‑M2/3‑66 (MQ=255) gcAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGatca > 1:11748117‑M2/3‑66 (MQ=255) gcAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGatca > 1:12268902‑M2/3‑66 (MQ=255) gcAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGagcat < 1:26103054‑M2/65‑1 (MQ=255) agATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGATCAtct < 1:21390588/67‑1 (MQ=255) agATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGATCAtct < 1:24000819/67‑1 (MQ=255) | CACCGGCTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGATCATCT > CP009273/4306565‑4306698 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |