New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP009273 108768 =280 (0.730)22 (0.060) 7/100 NT 8.4% coding (319/744 nt) zapD FtsZ stabilizer
?CP009273 108799 = 228 (0.660)coding (288/744 nt) zapD FtsZ stabilizer

Only 100 of 381 total aligned reads displayed.

AATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACGCCAATCCAGGTCTGGA  >  CP009273/108733‑108866
                                                                  |                                                                   
aaTCAAACGATGTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCt                                                                     <  1:22190071/67‑1 (MQ=255)
aaTCAAACGATCTTCACGCAGCAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCtt                                                                    >  1:11437771/1‑68 (MQ=255)
aaTCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCtt                                                                    >  1:28254227/1‑68 (MQ=255)
aaTCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCtt                                                                    >  1:108044/1‑68 (MQ=255)
   cAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTa                                                                 <  1:27717470/68‑1 (MQ=255)
   cAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTa                                                                 >  1:25829885/1‑68 (MQ=255)
   cAAACGATCTTCAAGAAGAAATTGCCAGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTa                                                                 >  1:14673629/1‑68 (MQ=255)
   cAAAAGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGCAAATTAATACGCTCCCCGCCGCTTTTa                                                                 >  1:29590581/1‑68 (MQ=255)
      aCGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAAct                                                              <  1:3725069/68‑1 (MQ=255)
      aCGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAAct                                                              <  1:12196825/68‑1 (MQ=255)
      aCGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAAct                                                              <  1:13597334/68‑1 (MQ=255)
        gATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAAct                                                              >  1:15931341/1‑66 (MQ=255)
        gATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAAct                                                              >  1:25218741/1‑66 (MQ=255)
        gATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAAct                                                              >  1:14433653/1‑66 (MQ=255)
        gATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAAct                                                              >  1:22831786/1‑66 (MQ=255)
        gATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAAct                                                              >  1:8156941/1‑66 (MQ=255)
        attgaagcattaattcagcagttaaacgcggcggggagcgtattaatttccgcgccgcTTTTAActgc                                                            <  1:4335353‑M2/10‑1 (MQ=255)
          tgaagcattaattcagcagttaaaaGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAActgctg                                                          <  1:6664592‑M1/43‑1 (MQ=255)
           cTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGa                                                         <  1:18751477/68‑1 (MQ=255)
            ttCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGaa                                                        <  1:31304052/68‑1 (MQ=255)
            ttCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGaa                                                        <  1:23725073/68‑1 (MQ=255)
            ttCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGaa                                                        <  1:6425605/68‑1 (MQ=255)
            ttCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGaa                                                        >  1:24323271/1‑68 (MQ=255)
            ttCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGACGCTTTTAACTGCTGaa                                                        <  1:21798561/68‑1 (MQ=255)
             agcattaattcagcagttaaaaGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTTACTGCTGAAt                                                       <  1:2395667‑M1/46‑1 (MQ=255)
             agcattaattcagcagttaaaaGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAAt                                                       <  1:19489321‑M1/46‑1 (MQ=255)
                cGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTaa                                                    >  1:7141903/1‑68 (MQ=255)
                    attcagcagttaaacgcggcggggagcgtattaatttccgcgccgcTTTTAACTGCTGAATTAATGCt                                                <  1:24575243‑M2/22‑1 (MQ=255)
                    attcagcagttaaaagcggcggggagcgtattaatttccgcgccgcTTTTAACTGCTGAATTAATGCt                                                <  1:24862201‑M2/22‑1 (MQ=255)
                     ttcagcagttaaaaGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCt                                                <  1:4609626‑M1/53‑1 (MQ=255)
                      aaTTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCt                                                <  1:26739516/66‑1 (MQ=255)
                      aaTTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCt                                                <  1:2754593/66‑1 (MQ=255)
                      aaTTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCt                                                <  1:17163213/66‑1 (MQ=255)
                      aaTTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCt                                                <  1:18156307/66‑1 (MQ=255)
                      aaTTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCt                                                <  1:17686502/66‑1 (MQ=255)
                      aaTTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCt                                                <  1:17463301/66‑1 (MQ=255)
                      aaTTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCt                                                <  1:17361100/66‑1 (MQ=255)
                      aaTTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCt                                                <  1:17054711/66‑1 (MQ=255)
                      aaTTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCt                                                <  1:30254291/66‑1 (MQ=255)
                      aaTTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCt                                                <  1:6205721/66‑1 (MQ=255)
                      aaTTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCt                                                <  1:7722176/66‑1 (MQ=255)
                      aaTTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCt                                                <  1:8972885/66‑1 (MQ=255)
                      aaTTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCt                                                <  1:957297/66‑1 (MQ=255)
                       aTTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCa                                             <  1:28571172/68‑1 (MQ=255)
                       aTTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCa                                             <  1:1871074/68‑1 (MQ=255)
                         tGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAAt                                           <  1:4210309/68‑1 (MQ=255)
                         tGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAAt                                           >  1:9331336/1‑68 (MQ=255)
                         gcagttaaaaGCGGCGCGGATATTAATACGCTCCCCGCCGCGTTTAACTGCGGAATTAATGCTTCAAt                                           <  1:24084329‑M1/58‑1 (MQ=255)
                           cccGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGGTTTTAACTGCTGAATTAATGCTTCAATAc                                         >  1:5343895/1‑68 (MQ=255)
                           cccGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATAc                                         >  1:18957918/1‑68 (MQ=255)
                           cccGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATAc                                         >  1:408227/1‑68 (MQ=255)
                           cccGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATAc                                         >  1:26291045/1‑68 (MQ=255)
                           cccGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACGGCTGAATTACTGCTTCAATAc                                         >  1:5978483/1‑68 (MQ=255)
                           agttaaaagcggcggggagcgtattaatttccgcgccgcTTTTAACTGCTGAATTAATGCTTCAAt                                           <  1:7779050‑M2/27‑1 (MQ=255)
                              gATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGc                                      <  1:7510363/68‑1 (MQ=255)
                              gATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGc                                      <  1:31014826/68‑1 (MQ=255)
                              gATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGc                                      <  1:20348270/68‑1 (MQ=255)
                              gATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGc                                      <  1:20726869/68‑1 (MQ=255)
                              gATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGc                                      <  1:11163969/68‑1 (MQ=255)
                                 aCGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGc                                      >  1:195593/1‑65 (MQ=255)
                                 aCGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGc                                      >  1:28797496/1‑65 (MQ=255)
                                   GCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTgg                                 <  1:20658184‑M1/68‑1 (MQ=255)
                                   GCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTgg                                 >  1:507783‑M1/1‑68 (MQ=255)
                                   GCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTgg                                 <  1:30838582‑M1/68‑1 (MQ=255)
                                     GGCGCGGGAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTGTGGt                                <  1:21968711‑M1/67‑1 (MQ=255)
                                      GCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTcc                              <  1:1623000‑M1/68‑1 (MQ=255)
                                      GCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTcc                              <  1:2358526‑M1/68‑1 (MQ=255)
                                        GCGGAAATTAATACGCTCCTCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCAc                            >  1:3263865‑M1/1‑68 (MQ=255)
                                        GCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCAc                            >  1:5840240‑M1/1‑68 (MQ=255)
                                          ggAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGTATTAATGCTTCAATACGGCTCTGGTCCACg                           <  1:30513145/67‑1 (MQ=255)
                                          ggAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACg                           <  1:21080255/67‑1 (MQ=255)
                                          ggAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACg                           <  1:26915591/67‑1 (MQ=255)
                                          ggAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACg                           <  1:15302180/67‑1 (MQ=255)
                                             aaTTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAg                       <  1:11700024/68‑1 (MQ=255)
                                             aaTTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAg                       >  1:15685170/1‑68 (MQ=255)
                                                  ttACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACg                  <  1:10887340/67‑1 (MQ=255)
                                                  aTACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCAc                   >  1:5259971/1‑67 (MQ=255)
                                                  aTACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACg                  <  1:16515304/68‑1 (MQ=255)
                                                  aTACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACg                  <  1:23287703/68‑1 (MQ=255)
                                                  aTACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACg                  <  1:19911359/68‑1 (MQ=255)
                                                   tACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACg                  >  1:31630529/1‑67 (MQ=255)
                                                   tACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACg                  >  1:8669069/1‑67 (MQ=255)
                                                    aCGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACGcc                >  1:31902099/1‑68 (MQ=255)
                                                    aCGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACGcc                >  1:25587708/1‑68 (MQ=255)
                                                    aCGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACGcc                >  1:18474877/1‑68 (MQ=255)
                                                    aCGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACGcc                >  1:12789848/1‑68 (MQ=255)
                                                    aCGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACGcc                >  1:12619862/1‑68 (MQ=255)
                                                      gCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACGCCaa              >  1:19323282/1‑68 (MQ=255)
                                                      gCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACGCCaa              >  1:10081875/1‑68 (MQ=255)
                                                        tCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACGCCAAt             <  1:15847585/67‑1 (MQ=255)
                                                            cgccgcTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACGCCAATCCAgg        <  1:14778417‑M2/62‑1 (MQ=255)
                                                            cgccgcTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACGCCAATCCAgg        <  1:29216583‑M2/62‑1 (MQ=255)
                                                             gccgcTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACGCCAATCCAgg        >  1:3903534‑M2/6‑67 (MQ=255)
                                                             gccgcTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACGCCAATCCAGGt       <  1:23459946‑M2/63‑1 (MQ=255)
                                                               cgcTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACGCCAATCCAGGTCt     <  1:3387051‑M2/65‑1 (MQ=255)
                                                                gcTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACGCCAATCCAGGTCTg    <  1:13303893‑M2/66‑1 (MQ=255)
                                                                  ttttAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACGCCAATCCAGGTCTgg   <  1:10510581/67‑1 (MQ=255)
                                                                  ttttAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACGCCAATCCAGGTCTGGa  <  1:13156764/68‑1 (MQ=255)
                                                                  ttttAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACGCCAATCCAGGTCTGGa  <  1:3565559/68‑1 (MQ=255)
                                                                  ttttAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACGCCAATCCAGGTCTGGa  <  1:10282716/68‑1 (MQ=255)
                                                                  |                                                                   
AATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACGCCAATCCAGGTCTGGA  >  CP009273/108733‑108866

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.