| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 3015939 | 514 (1.340) | 26 (0.080) | 13/96 | NT | 5.9% | coding (1265/2871 nt) | xdhD | putative hypoxanthine oxidase, molybdopterin‑binding/Fe‑S binding |
| ? | CP009273 | = 3015996 | 392 (1.190) | coding (1322/2871 nt) | xdhD | putative hypoxanthine oxidase, molybdopterin‑binding/Fe‑S binding | |||||
Only 100 of 495 total aligned reads displayed.
ACGCCGCCAGGTCGCGCGCCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTG > CP009273/3015931‑3016063 | aCGCCGCCAGGTCGCGCGCCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTtg < 1:10273717‑M2/68‑3 (MQ=255) cgccgcCAGGTCGCGCGCCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTtg < 1:15799911‑M2/67‑3 (MQ=255) cgccgcCAGGTCGCGCGCCTAGTGGGAATGAAACAGCATAAAGTTAATGTCATTAAACAGCTAGTtg < 1:29675729‑M2/67‑3 (MQ=255) gccgccAGGTCGCGCGCCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTtggc < 1:31992231‑M2/68‑5 (MQ=255) ccgccAGGTCGCGCGCCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTtggcg < 1:16022660‑M2/68‑6 (MQ=255) ccAGGTCGCGCGCCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTtggcggcg < 1:5179184‑M2/68‑9 (MQ=255) gTCGCGCGCCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGCGCGAGTTGGCGGCGGttt > 1:30358381/1‑68 (MQ=255) gTCGCGCGCCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGttt > 1:30041522/1‑68 (MQ=255) gTCGCGCGCCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGttt > 1:20706894/1‑68 (MQ=255) gTCGCGCGCCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGttt > 1:18855731/1‑68 (MQ=255) gTCGCGCGCCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGttt > 1:14936140/1‑68 (MQ=255) cgcgcgCCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTg > 1:4404499/1‑68 (MQ=255) cgcgcgCCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTg > 1:23357403/1‑68 (MQ=255) gcgcCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGt < 1:14055116/67‑1 (MQ=255) gcCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTtggcggcgtaagtgccat > 1:30683293‑M2/1‑49 (MQ=255) ccTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCa > 1:9551543/1‑68 (MQ=255) cTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCaa < 1:21602546/68‑1 (MQ=255) cTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCaa < 1:17919116/68‑1 (MQ=255) cTCGGGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGCGCGAGTgggcggcgtaagtgccatggt > 1:25202547‑M2/1‑47 (MQ=255) cTCGGGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTtggcggcgtaagtgccatggt > 1:10866901‑M2/1‑47 (MQ=255) cGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTtggcggcgtaagtgccatggtac > 1:23940527‑M2/1‑45 (MQ=255) gggCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTtggcggcgtaagtgccatggtacctg > 1:13377567‑M2/1‑42 (MQ=255) gggCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAgg < 1:28138227/68‑1 (MQ=255) gggCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAgg < 1:19876799/68‑1 (MQ=255) gggCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAg < 1:15121996/67‑1 (MQ=255) ggCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAgg > 1:10154548/1‑67 (MQ=255) ggCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAgg > 1:22489445/1‑67 (MQ=255) cATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACa > 1:5073659/1‑68 (MQ=255) aTGAAACAGTATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTCGTTCCAAACAGGACa > 1:26608845/1‑67 (MQ=255) aTGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACa > 1:29960796/1‑67 (MQ=255) aTGAAACAGCATAAACTTCATGTCATAAAAGACCGAGTtggcggcgtaagtgccatggtacctgggt > 1:7300111‑M2/1‑38 (MQ=255) gAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATcc < 1:26245697/68‑1 (MQ=255) aaaCAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACAt > 1:16441271/1‑65 (MQ=255) aaCAGCATAAAGTACATGTCATTAACGCGCGCGTtggcggcttaagtgccatggtacctgggtggagg > 1:13609835‑M2/1‑34 (MQ=255) aCAGCATGAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCct > 1:21284331/1‑66 (MQ=255) aCAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCctgc < 1:11191282/68‑1 (MQ=255) aCAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCctgc < 1:22740726/68‑1 (MQ=255) aCAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCctgc < 1:19076508/68‑1 (MQ=255) aCAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCctgc < 1:12350525/68‑1 (MQ=255) aCAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCctgc < 1:8208986/68‑1 (MQ=255) aCAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCctgc < 1:3844536/68‑1 (MQ=255) aCAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCct > 1:29070687/1‑66 (MQ=255) aCAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCct > 1:28525624/1‑66 (MQ=255) aCAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCct > 1:1194415/1‑66 (MQ=255) aCAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCct > 1:6957390/1‑66 (MQ=255) aCAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCct > 1:25445312/1‑66 (MQ=255) aCAGCATAAAGTTCATGTCATTAAAGAGCGAGGTGGCGGCGGTTTTGGTTCCAAACAGGACATCctgc < 1:12562254/68‑1 (MQ=255) aTACAGTTCCTGTCATTAAACAGCGAGTtggcggcgtaagtgccatggtacctgggtggaggcgt > 1:31609169‑M2/1‑28 (MQ=255) aTAAAGTTCATGTCATTAAAGAGCGAGTgggcggcgtaagtgccatggtacctgggtggaggcgt > 1:8845973‑M2/1‑28 (MQ=255) aTAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCctgctg < 1:26938352/65‑1 (MQ=255) aTAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCctgctg < 1:13522912/65‑1 (MQ=255) aTAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCctgctg < 1:18266726/65‑1 (MQ=255) aTAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGgaa > 1:1530517/1‑68 (MQ=255) aTAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGgaa > 1:4543504/1‑68 (MQ=255) aTAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGgaa > 1:19688919/1‑68 (MQ=255) aTAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGga < 1:241797/67‑1 (MQ=255) aTAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGga < 1:16851238/67‑1 (MQ=255) aTAAACTTCATGTCATTAAAGAGCGAGTtggcggcgtaagtgccatggtacctgggtggaggcgtgga > 1:6178550‑M2/1‑28 (MQ=255) aaGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGgaagaa < 1:17455609/68‑1 (MQ=255) aaGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGgaagaa > 1:29347255/1‑68 (MQ=255) aGTGCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGaagaag < 1:3092747/68‑1 (MQ=255) gTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAgt > 1:26350804/1‑68 (MQ=255) gTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAgt > 1:21156698/1‑68 (MQ=255) gTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAgt > 1:17069719/1‑68 (MQ=255) gTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAgt > 1:230581/1‑68 (MQ=255) gTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAgt > 1:31790326/1‑68 (MQ=255) gTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAgt > 1:25974456/1‑68 (MQ=255) ttCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAgtg > 1:27219440/1‑68 (MQ=255) ttCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAgtg > 1:5393500/1‑68 (MQ=255) tGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTgcg < 1:27695023/68‑1 (MQ=255) tGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTgcg < 1:4945998/68‑1 (MQ=255) tGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTgcg < 1:20939700/68‑1 (MQ=255) tGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTgc > 1:7601914/1‑67 (MQ=255) tCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTgcg > 1:11698321/1‑66 (MQ=255) tCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTgcg > 1:18483655/1‑66 (MQ=255) tCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTgcg > 1:14495195/1‑66 (MQ=255) cATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGcc < 1:25816675/67‑1 (MQ=255) cATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCt < 1:12858303/68‑1 (MQ=255) aTTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTg < 1:16560956/68‑1 (MQ=255) aTTAAAGAGCGAGATGGCGGCGGTTTTGGTGCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTg < 1:27865880/68‑1 (MQ=255) agagCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCa > 1:3640637/1‑67 (MQ=255) agagCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCa > 1:14755773/1‑67 (MQ=255) agagCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCa > 1:8988057/1‑67 (MQ=255) agagCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCa > 1:2038347/1‑67 (MQ=255) agagCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCa > 1:5765810/1‑67 (MQ=255) agagCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCa > 1:22122998/1‑67 (MQ=255) agagCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCa > 1:10603375/1‑67 (MQ=255) agagCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCa > 1:24977833/1‑67 (MQ=255) agagCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCa > 1:4028962/1‑67 (MQ=255) gagCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCaa > 1:185667/1‑67 (MQ=255) gagCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCaa > 1:6542647/1‑67 (MQ=255) gagCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCaa > 1:14346217/1‑67 (MQ=255) gagCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCaa > 1:9260489/1‑67 (MQ=255) agCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCaa > 1:6352899/1‑66 (MQ=255) agCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCaa > 1:28784907/1‑66 (MQ=255) agCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCaa > 1:852584/1‑66 (MQ=255) gAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCt < 1:5873124/66‑1 (MQ=255) gAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCt < 1:16282930/66‑1 (MQ=255) gAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCt < 1:32103047/66‑1 (MQ=255) gAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGc < 1:13138025/68‑1 (MQ=255) | ACGCCGCCAGGTCGCGCGCCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTG > CP009273/3015931‑3016063 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |