| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 1240767 = | 351 (0.740) | 30 (0.070) | 16/96 | NT | 8.2% | coding (152/441 nt) | ycgY | uncharacterized protein |
| ? | CP009273 | = 1302830 | 374 (0.920) | coding (73/1461 nt) | clsA | cardiolipin synthase 1 | |||||
Only 100 of 170 total aligned reads displayed.
TAATCACATAATCCAGACACTCCAGAGAATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGCGTAACT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/1240841‑1240767‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgtaactTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATTTACATT < CP009273/1302830‑1302765 AATCACATAATCCAGCCACTCCAGAGAATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGC > 1:24017560/1‑68 AATCACATAATCCAGACACTCCAGAGAATTTAGCAACCAAAAAATGAATTCAGACCATTCCTCTTCGC > 1:30577513/1‑68 AATCACATAATCCAGACACTCCAGAGAATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGC > 1:28951543/1‑68 AATCACATAATCCAGACACTCCAGAGAATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGC > 1:33655869/1‑68 ATCACATAATCCAGACACTCCAGAGAATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGCG > 1:21244762/1‑68 TCACATAATCCAGACACTCCAGAGAATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGCGT > 1:16340323/1‑68 TCACATAATCCAGACACTCCAGAGAATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGCGT > 1:4581836/1‑68 CACATAATCCAGACACTCCAGAGAATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGCGTA < 1:6619644/68‑1 CACATAATCCAGACACTCCAGAGAATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGCGTA < 1:18357784/68‑1 CACATAATCCAGACACTCCAGAGAATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGCGTA < 1:34418465/68‑1 CACATAATCCAGACACTCCAGAGAATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGCGTA < 1:33605164/68‑1 CATAATCCAGACACTCCAGAGAATTTAGCAACCAAATAAAGAATTCAGACCATTCCTCTTCGCGTA > 1:22959792/1‑66 CATAATCCAGACACTCCAGAGAATTTAGCAACCAAATAAAGAATTAAGACCATTCCTCTGAGCGTA > 1:4640634/1‑66 CATAATCCAGACACTCCAGAGAATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGCGTAAC < 1:36162870/68‑1 CATAATCCAGACACTCCAGAGAATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGCGTAAC < 1:23234509/68‑1 CATAATCCAGACACTCCAGAGAATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGCGTAAC < 1:24298795/68‑1 CATAATCCAGACACTCCAGAGAATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGCGTAAC < 1:27594598/68‑1 CATAATCCAGACACTCCAGAGAATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGCGTAAC < 1:36395736/68‑1 CATAATCCAGACACTCCAGAGAATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGCGTAAC < 1:25751986/68‑1 CATAATCCAGACACTCCAGAGAATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGCGTAAC < 1:39601884/68‑1 CATAATCCAGACACTCCAGAGAATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGCGTAAC < 1:84928/68‑1 CATAATCCAGACACTCCAGAGAATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGCGTAAC < 1:1314740/68‑1 ATAATCCAGACACTCCAGAGAATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTGGCGTc > 1:23617484/1‑64 ATAATCCAGACACTCCAGAGAATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGCGTAACT < 1:21413861/68‑1 ATAATCCAGACACTCCAGAGAATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGCGTAACT < 1:29729913/68‑1 ATAATCCAGACACTCCAGAGAATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGCGTA > 1:455003/1‑65 ATAATCCAGACACTCCAGAGAATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGCGTA > 1:505965/1‑65 ATAATCCAGACACTCCAGAGAATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGCGTA > 1:32456353/1‑65 CCAGACACTCCAGAGAATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGCGTAACTTTAC > 1:156760/1‑67 CCAGACACTCCAGAGAATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGCGTAACTTTAC > 1:22188596/1‑67 ACACTCCAGAGAATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGCGTAACTTTACGCAT > 1:31059479/1‑67 ACACTCCAGAGAATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGCGTAACTTTACGCAT > 1:6533651/1‑67 CACTCCAGAGAATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGCGTAACTTTACGCA < 1:9130276/65‑1 ACTCCAGAGAATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGCGTAACTTTACGCATTCT < 1:12407516/68‑1 GAATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGCGTAACTTTACGCATTCTAATGAAAC > 1:12021378/1‑68 GAATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGCGTAACTTTACGCATTCTAATGAAAC > 1:2627586/1‑68 GCAACCAAAAAAAGAATTCATACCATTCCTCTACGCGTAAATTTACGAATTCTAATGAAACGACGCGC > 1:8823483/1‑68 AAAAAGAATTCAGACCATTCCTCTTCGCGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCT < 1:13321930/68‑1 AAAAAGAATTCAGACCATTCCTCTTCGCGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCT < 1:33832055/68‑1 AAAAAGAATTCAGACCATTCCTCTTCGCGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCT < 1:1292506/68‑1 AGAATTCAGACCATTCCTCTTCGCGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGC > 1:34256397/1‑68 TCAGACCATTCCTCTTCGCGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATG > 1:37591240/1‑67 CCTCTTCGCGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTT > 1:11037566/1‑68 CTTCGCGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGAT < 1:480144/68‑1 CTTCGCGTAACTTTAAGCATTCTAATGAAAAGACGCGCAGTTCCCTCCGCGATGGCCTGGCGGTTGAT < 1:8453326/68‑1 TCGCGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTA < 1:13864461/68‑1 CGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATTT > 1:29920021/1‑68 CGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATTT > 1:36878457/1‑68 CGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATTT > 1:36913305/1‑68 CGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATTT > 1:37487751/1‑68 CGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATTT > 1:21733526/1‑68 CGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATTT > 1:22398070/1‑68 CGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATTT > 1:3935831/1‑68 CGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATTT > 1:17740783/1‑68 CGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATTT > 1:31828078/1‑68 CGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATTT > 1:14590563/1‑68 CGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATTT > 1:22899716/1‑68 CGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATTT > 1:28905539/1‑68 CGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATTT > 1:13636762/1‑68 CGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATTT > 1:781551/1‑68 CGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATTT > 1:27243442/1‑68 CGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATTT > 1:783522/1‑68 CGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATTT > 1:26549931/1‑68 CGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATT < 1:22957654/67‑1 CGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATT < 1:31667242/67‑1 CGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATT < 1:21198190/67‑1 CGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATT < 1:11368470/67‑1 CGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTA < 1:25909714/65‑1 CGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTA < 1:4890248/65‑1 CGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTA < 1:15941150/65‑1 CGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTA < 1:13355453/65‑1 CGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTA < 1:19708883/65‑1 CGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTA < 1:35459105/65‑1 CGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTA < 1:24888511/65‑1 CGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTA < 1:22684505/65‑1 CGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCGGGCTGTTGATTATTT > 1:26647041/1‑68 AACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATT < 1:34238930/64‑1 ACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATTTACAT < 1:21033414/68‑1 ACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATTTACAT > 1:28093285/1‑68 ACTTTACGCATTCTAATGAAACGACCCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATTTACAT > 1:23630019/1‑68 CTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATTTACAT > 1:29904442/1‑67 CTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATTTACAT > 1:10255671/1‑67 CTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATTTACAT > 1:11771393/1‑67 CTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATTTACAT > 1:25244739/1‑67 CTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATTTACAT > 1:27944461/1‑67 CTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATTTACAT > 1:28006828/1‑67 CTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATTTACAT > 1:6008859/1‑67 CTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATTTACAT > 1:22727584/1‑67 CTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATTTACAT > 1:449565/1‑67 CTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATTTACAT > 1:33221973/1‑67 CTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATTTACAT > 1:33266664/1‑67 CTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATTTACAT > 1:38758751/1‑67 CTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATTTACAT > 1:38000185/1‑67 CTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATTTACAT > 1:21830144/1‑67 CTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATTTACAT > 1:20199634/1‑67 CTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTCGATTATTTACAT > 1:20303449/1‑67 TTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATTTACAT > 1:17326519/1‑66 TTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATTTACAT > 1:7042904/1‑66 TTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATTTACAT > 1:8291685/1‑66 TTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATTTACAT > 1:25425420/1‑66 TAATCACATAATCCAGACACTCCAGAGAATTTAGCAACCAAAAAAAGAATTCAGACCATTCCTCTTCGCGTAACT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/1240841‑1240767‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgtaactTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATTTACATT < CP009273/1302830‑1302765 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |