BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	2416916 =	486 (1.020)	18 (0.040)	11/96	NT	5.0%	coding (103/891 nt)	yfcI	transposase_31 family protein
*	?	CP009273	2416950 =	267 (0.660)	18 (0.040)	11/96	NT	5.0%	coding (69/891 nt)	yfcI	transposase_31 family protein

Only 100 of 155 total aligned reads displayed.

ATGATGCGGTATTTAAATCTTTTTTACGCCATCCAGACACCGCGCGGGATTTTATTGATATTCATCTTCCCGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP009273/2416990‑2416916

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcccgcgcGGTGTCTGGATGGCGTAAAAAAGATTTAAATACCGCATCATGCGGCGTGGAAGTTGTCGATATTGT  >  CP009273/2416950‑2417015

ATGATGCGGTATTTAAATCTTTTTTACGCCATCCAGACACCGCGCGGGATTTTATTGATATTCATCTT                                                                           <  1:9491902/68‑1

ATGATGCGGTATTTAAATCTTTTTTACGCCATCCAGACACCGCGCGGGATTTTATTGATATTCATCTT                                                                           <  1:11917041/68‑1

ATGATGCGGTATTTAAATCTTTTTTACGCCATCCAGACACCGCGCGGGATTTTATTGATATTCATCTT                                                                           <  1:33284557/68‑1

ATGATGCGGTATTTAAATCTTTTTTACGCCATCCAGACACCGCGCGGGATTTTATTGATATTCATCTT                                                                           <  1:39018027/68‑1

ATGATGCGGTATTTAAATCTTTTTTACGCCATCCAGACACCGCGCGGGATTTTATTGATATTCATCTT                                                                           <  1:23834246/68‑1

 TGATGCGGTATTTAAATCTTTTTTACGCCATCCAGACCCCGCGCGGGATTTTATTGATATTCATCTT                                                                           >  1:679631/1‑67

 TGATGCGGTATTTAAATCTTTTTTACGCCATCCAGACACCGCGCGGGATTTTATTGATATTCATCTTC                                                                          <  1:2141899/68‑1

   ATGCGGTATTTAAATCTTTTTTACGCCATCCAGACACCGCGCGGGATTTTATTGATATTCATCTTCCC                                                                        >  1:5782068/1‑68

   ATGCGGTATTTAAATCTTTTTTACGCCATCCAGACACCGCGCGGGATTTTATTGATATTCATCTTCCC                                                                        >  1:15304262/1‑68

   ATGCGGTATTTAAATCTTTTTTACGCCATCCAGACACCGCGCGGGATTTTATTGATATTCATCTTCCC                                                                        >  1:36274617/1‑68

   ATGCGGTATTTAAATCTTTTTTACGCCATCCAGACACCGCGCGGGATTTTATTGATATTCATCTTC                                                                          >  1:3973035/1‑66

   ATGCGGTATTTAAATCTTTTTTAAGACATCCAGACACAGCGCGGGATTTTATTGATAGTAATCTGCCC                                                                        >  1:10264064/1‑68

    TGCGGTATTTAAATCTTTTTTACGCCATCCAGACACCGCGCGGGATTTTATTGATATTCATCTTCCCG                                                                       <  1:18524214/68‑1

     GCGGTATTTAAATCTTTTTTACGCCATCCAGACACCGCGCGGGATTTTATTGATATTCATCTTCCCGC                                                                      >  1:22576442/1‑68

     GCGGTATTTAAATCTTTTTTACGCCATCCAGACACCGCGCGGGATTTTATTGATATTCATCTTCCCGC                                                                      >  1:24587054/1‑68

     GCGGTATTTAAATCTTTTTTACGCCATCCAGACACCGCGCGGGATTTTATTGATATTCATCTTCCCGC                                                                      >  1:20129497/1‑68

     GCGGTATTTAAATCTTTTTTACGCCATCCAGACACCGCGCGGGATTTTATTGATATTCATCTTCCCGC                                                                      >  1:38113223/1‑68

     GCGGTATTTAAATCTTTTTTACGCCATCCAGACACCGCGCAGGATTTTATTGATATTCATCTTCCCGC                                                                      >  1:25456940/1‑68

       GGTATTTAAATCTTTTTTACGCCATCCAGACACCGCGCGGGATTTTATTGATATTCATCTTCCCGCG                                                                     <  1:5054339/67‑1

          ATTTAAATCTTTTTTCCGCCATCCAGACACCGCGCGGGATTTTATTGATATTCATCTTCCCGCGCGGT                                                                 <  1:14358783/68‑1

          ATTTAAATCTTTTTTACGCCATCCAGACACCGCGCGGGATTTTATTGATATTCATCTTCCCGCGCGGT                                                                 <  1:24012188/68‑1

          ATTTAAATCTTTTTTACGCCATCCAGACACCGCGCGGGATTTTATTGATATTCATCTTCCCGCGCGGT                                                                 <  1:34765094/68‑1

          ATTTAAATCTTTTTTACGCCATCCAGACACCGCGCGGGATTTTATTGATATTCATCTTCCCGCGCGGT                                                                 <  1:21001925/68‑1

          ATTTAAATCTTTTTTACGCCATCCAGACACCGCGCGGGATTTTATTGATATTCATCTTCCCGCGCGGT                                                                 <  1:3021143/68‑1

          ATTTAAATCTTTTTTACGCCATCCAGACACCGCGCGGGATTTTATTGATATTCATCTTCCCGCGCGGT                                                                 <  1:30262890/68‑1

          ATTTAAATCTTTTTTACGCCATCCAGACACCGCGCGGGATTTTATTGATATTCATCTTCCCGCGCGGT                                                                 <  1:31584053/68‑1

          ATTTAAATCTTTTTTACGCCATCCAGACACCGCGCGGGATTTTATTGATATTCATCTTCCCGCGCGGT                                                                 <  1:33896681/68‑1

          ATTTAAATCTTTTTTACGCCATCCAGACACCGCGCGGGATTTTATTGATATTCATCTTCCCGCGCGGT                                                                 <  1:34339234/68‑1

          ATTTAAATCTTTTTTACGCCATCCAGACACCGCGCGGGATTTTATTGATATTCATCTTCCCGCGCGGT                                                                 <  1:10072044/68‑1

          ATTTAAATCTTTTTTACGCCATCCAGACACCGCGCGGGATTTTATTGATATTCATCTTCCCGCGCGGT                                                                 <  1:38118225/68‑1

          ATTTAAATCTTTTTTACGCCATCCAGACACCGCGCGGGATTTTATTGATATTCATCTTCCCGCGCGGT                                                                 <  1:3886966/68‑1

          ATTTAAATCTTTTTTACGCCATCCAGACACCGCGCGGGATTTTATTGATATTCATCTTCCCGCGCGGT                                                                 <  1:7408913/68‑1

          ATTTAAATCTTTTTTACGCCATCCAGACACCGCGCGGGATTTTATTGATATTCATCTTCCCGCGCGGT                                                                 <  1:9575956/68‑1

          ATTTAAATCTTTTTTACGCCATCCAGACACCGCGCGGGATTTTATTGATATTCATCTTCCCGCGCGGT                                                                 <  1:12100150/68‑1

          ATTTAAATCTTTTTTACGCCATCCAGACACCGCGCGGGATTTTATTGATATTCATCTTCCCGCGCGGT                                                                 <  1:12382351/68‑1

          ATTTAAATCTTTTTTACGCCATCCAGACACCGCGCGGGATTTTATTGATATTCATCTTCCCGCGCGGT                                                                 <  1:12735079/68‑1

          ATTTAAATCTTTTTTACGCCATCCAGACACCGCGCGGGATTTTATTGATATTCATCTTCCCGCGCGGT                                                                 <  1:12336825/68‑1

          ATTTAAATCTTTTTTACGCCATCCAGACACCGCGCGGGATTTTATTGATATTCATCTTCCCGCGCGGT                                                                 <  1:13190584/68‑1

          ATTTAAATCTTTTTTACGCCATCCAGACACCGCGCGGGATTTTATTGATATTCATCTTCCCGCGCGGT                                                                 <  1:19598911/68‑1

          ATTTAAATCTTTTTTACGCCATCCAGACACCGCGCGGGATTTTATTGATATTCATCTTCCCGCGCGGT                                                                 <  1:20227490/68‑1

          ATTTAAATCTTTTTTACGCCATCCAGACACCGCGCGGGATTTTATTGATATTCATCTTCCCGCGCGGT                                                                 <  1:18007518/68‑1

          ATTTAAATCTTTTTTACGCCATCCAGACACCGCGCGGGATTTTATTGATATTCATCTTCCCGCGCGGT                                                                 <  1:14645489/68‑1

          ATTTAAATCTTTTTTACGCCATCCAGACACCGCGCGGGATTTTATTGATATTCATCTTCCCGCGCGGT                                                                 <  1:14793268/68‑1

          ATTTAAATCTTTTTTACGCCATCCAGACACCGCGCGGGATTTTATTGATATTCATCTTCCCGCGCGGT                                                                 <  1:20938364/68‑1

           TTTAAATCTTTTTTACGCCATCCAGACACCGCGCGGGATTTTATTGATATTCATCTTCCCGCGCGGTG                                                                <  1:1603097/68‑1

           TTTAAATCTTTTTTACGCCATCCAGACACCGCGCGGGATTTTATTGATATTCATCTTCCCGCGCGGTG                                                                <  1:14240860/68‑1

           TTTAAATCTTTTTTACGCCATCCAGACACCGCGCGGGATTTTATTGATATTCATCTTCCCGCGCGGTG                                                                <  1:35420310/68‑1

           TTTAAATCTTTTTTACGCCATCCAGACACCGCGCGGGATTTTATTGATATTCATCTTCCCGCGCGGTG                                                                <  1:29831364/68‑1

           TTTAAATCTTTTTTACGCCATCCAGACACCGCGCGGGATTTTATTGATATTCATCTTCCCGCGCGGTG                                                                <  1:35324222/68‑1

           TTTAAATCTTTTTTACGCCATCCAGACACCGCGCGGGATTTTATTGATATTCATCTTCCCGCGCGGTG                                                                <  1:35208582/68‑1

           TTTAAATCTTTTTTACGCCATCCAGACACCGCGCGGGATTTTATTGATATTCATCTTCCCGCGCGGTG                                                                <  1:18678645/68‑1

           TTTAAATCTTTTTTACGCCATCCAGACACCGCGCGGGATTTTATTGATATTCATCTTCCCGCGCGGTG                                                                <  1:5158725/68‑1

           TTTAAATCTTTTTTACGCCATCCAGACACCGCGCGGGATTTTATTGATATTCATCTTCCCGCGCGGTG                                                                <  1:5440418/68‑1

           TTTAAATCTTTTTTACGCCATCCAGACACCGCGCGGGATTTTATTGATATTCATCTTCCCGCGCGGTG                                                                <  1:10789955/68‑1

           TTTAAATCTTTTTTACGCCATCCAGACACCGCGCGGGATTTTATTGATATTCATCTTCCCGCGCGGTG                                                                <  1:7688219/68‑1

           TTTAAATCTTTTTTACGCCATCCAGACACCGCGCGGGATTTTATTGATATTCATCTTCCCGCGCGGTG                                                                <  1:2250814/68‑1

           TTTAAATCTTTTTTACGCCATCCAGACACCGCGCGGGATTTTATTGATATTCATCTTCCCGCGCGGTG                                                                <  1:22081130/68‑1

           TTTAAATCTTTTTTACGCCATCCAGACACCGCGCGGGATTTTATTGATATTCATCTTCCCGCGCGGTG                                                                <  1:22032175/68‑1

            TTAAATCTTTTTTACGCCATCCAGACACCGCGCGGGATTTTATTGATATTCATCTTCCCGCGCGGTGT                                                               <  1:4431170/68‑1

            TTAAATCTTTTTTACGCCATCCAGACACCGCGCGGGATTTTATTGATATTCATCTTCCCGCGCGGTGT                                                               <  1:29704859/68‑1

            TTAAATCTTTTTTACGCCATCCAGACACCGCGCGGGATTTTATTGATATTCATCTTCCCGCGCGGTGT                                                               <  1:8270267/68‑1

             TAAATCTTTTTTACGCCATCCAGACACCGCGCGGGATTTTATTGATATTCATCTTCCCGCGCGGTGTC                                                              <  1:38618284/68‑1

                     TTTTACGCCATCCAGACACCGCGCGGGATTTTATTGATATTCATCTTCCCGCGCGGTGTCTGGATGGC                                                      <  1:10051970/68‑1

                      TTTACGCCATCCAGACACCGCGCGGGATTTTATTGATATTCATCTTCCCGCGCGGTGTCTGGATGGCG                                                     <  1:36700346/68‑1

                               TCCAGACACCGCGCGGGATTTTATTGATATTCATCTTCCCGCGCGGTGTCTGGATGGCGTAAAAAAGA                                            <  1:22728291/68‑1

                                      ACCGCGCGGGATTTTATTGATATTCATCTTCCCGCGCGGTGTCTGGATGGCGTAAAAACGATTTAAAT                                     <  1:27285968/68‑1

                                           GCGGGATTTTATTGATATTCATCTTCCCGCGCGGTGTCTGGATGGCGTAAAAAAGATTTAAATACCGC                                <  1:17341071/68‑1

                                           GCGGGATTTGATTGATCTGCACCTCCCCGCGCGGTGTCTGGAAGGCGTAAAAAAGATTTAAATACCGC                                <  1:27995522/68‑1

                                           GCGGGATTAAACTGACATTCCCCTTCCCGCGCGGTGTCTGGATGGCGTAAAAAAGATTTAAATACCGC                                <  1:7680340/68‑1

                                             GGGATTTTATTGATATTCATCTTCCCGCGCGGTGTCTGGATGGCGTAAAAAAGATTTAAATACCGCAT                              <  1:32873276/68‑1

                                             GGGATTTTATTGATATTCATCATCCCGCGCGGTGTCTGGATGGCGTAAAAAAGATTTAAATACCGCAT                              <  1:39377015/68‑1

                                                     ATTCATATTCCTCTTCCCGCGCGGTGGCTGGATGGCGTAAAAAAGATTTAAATACCGCATCATGCGGC                      <  1:6639140/68‑1

                                                          TATTCATCTTCCCGCGCGGTGTCTGGATGGCGTAAAAAAGATTTAAATACCGCATCATGCGGCGTGGA                 <  1:10358245/68‑1

                                                                    CCCGCGCGGTGTCTGGGTGGCGTAAAAAAGATTTAAATACCGCATCATGCGGCGTGGAAGTTGTCGAT       >  1:3575895/1‑68

                                                                    CCCGCGCGGTGTCTGGATGGCGTAATACAGATTTAAATACCGCATGATGCGGCGTGGAAGTTGTCGAT       >  1:26603555/1‑68

                                                                    CCCGCGCGGTGTCTGGATGGCGTAAAGAAGATTTAAATACCGCATCATGCGGCGTGGAAGTTGTCGAT       <  1:17013613/68‑1

                                                                    CCCGCGCGGTGTCTGGATGGCGTAAAAAAGATTTAAATACCGCATCATGCGGCGTGGAAGTTGTCGAT       <  1:19335686/68‑1

                                                                    CCCGCGCGGTGTCTGGATGGCGTAAAAAAGATTTAAATACCGCATCATGCGGCGTGGAAGTTGTCGAT       >  1:25877840/1‑68

                                                                    CCCGCGCGGTGTCTGGATGGCGTAAAAAAGATTTAAATACCGCATCATGCGGCGTGGAAGTTGTCGAT       >  1:23438485/1‑68

                                                                    CCCGCGCGGTGTCTGGATGGCGTAAAAAAGATTTAAATACCGCATCATGCGGCGTGGAAGTTGTCGAT       >  1:7331364/1‑68

                                                                    CCCGCGCGGTGTCTGGATGGCGTAAAAAAGATTTAAATACCGCATCATGCGGCGTGGAAGTTGTCGAT       >  1:26929876/1‑68

                                                                    CCCGCGCGGTGTCTGGATGGCGTAAAAAAGATTTAAATACCGCATCATGCGGCGTGGAAGTTGTCGAT       <  1:2256890/68‑1

                                                                    CCCGCGCGGTGTCTGGATGGCGTAAAAAAGATTTAAATACCGCATCATGCGGCGTGGAAGTTGTCGAT       >  1:16436122/1‑68

                                                                    CCCGCGCGGTGTCTGGATGGCGTAAAAAAGATTTAAATACCGCATCATGCGGCGTGGAAGTTGTCGAT       >  1:39514158/1‑68

                                                                    CCCGCGCGGTGTCTGGATGGCGTAAAAAAGATTTAAATACCGCATCATGCGGCGTGGAAGTTGTCGAT       >  1:13349041/1‑68

                                                                    CCCGCGCGGTGTCTGGATGGCGTAAAAAAGATTTAAATACCGCATCATG                          >  1:34540475/1‑49

                                                                    CCCGCGCGGTGTCTGGATGGCGTAAAAAAGATTAAAATACCGCATCATGCGGCGTGGAAGTTGTCGAT       >  1:32215593/1‑68

                                                                       GCGCGGTGTCTGGATGGCGTAAAAAAGATTTAAATACCGCATCATGCGGCGTGGAAGTTGTCGATATT    <  1:20557983/68‑1

                                                                       GCGCGGTGTCTGGATGGCGTAAAAAAGATTTAAATACCGCATCATGCGGCGTGGAAGTTGTCGATATT    <  1:6555643/68‑1

                                                                       GCGCGGTGTCTGGATGGCGTAAAAAAGATTTAAATACCGCATCATGCGGCGTGGAAGTTGTCGATATT    <  1:22800982/68‑1

                                                                       GCGCGGTGTCTGGATGGCGTAAAAAAGATTTAAATACCGCATCATGCGGCGTGGAAGTTGTCGATATT    <  1:27643853/68‑1

                                                                         GCGGTGTCTGGATGGCGTAAAAAAGATTTAAATACCGCATCATGCGGCGTGGAAGTTGTCGATATTGT  <  1:32193222/68‑1

                                                                         GCGGTGTCTGGATGGCGTAAAAAAGATTTAAATACCGCATCATGCGGCGTGGAAGTTGTCGATATTGT  <  1:31568786/68‑1

                                                                         GCGGTGTCTGGATGGCGTAAAAAAGATTTAAATACCGCATCATGCGGCGTGGAAGTTGTCGATATTGT  <  1:11058482/68‑1

                                                                         GCGGTGTCTGGATGGCGTAAAAAAGATTTAAATACCGCATCATGCGGCGTGGAAGTTGTCGATATTGT  <  1:32629353/68‑1

                                                                         GCGGTGTCTGGATGGCGTAAAAAAGATTTAAATACCGCATCATGCGGCGTGGAAGTTGTCGATATTGT  <  1:15390707/68‑1

                                                                         GCGGTGTCTGGATGGCGTAAAAAAGATTTAAATACCGCATCATGCGGCGTGGAAGTTGTCGATATTGT  <  1:20519113/68‑1

                                                                         GCGGTGTCTGGATGGCGTAAAAAAGATTTAAATACCGCATCATGCGGCGTGGAAGTTGTCGATATTGT  <  1:3350118/68‑1

                                                                         GCGGTGTCTGGATGGCGTAAAAAAGATTTAAATACCGCATCATGCGGCGTGGAAGTTGTCGATATTGT  <  1:32895941/68‑1

                                                                         GCGGTGTCTGGATGGCGTAAAAAAGATTTAAATACCGCATCATGCGGCGTGGAAGTTGTCGATATTG   >  1:36643991/1‑67

ATGATGCGGTATTTAAATCTTTTTTACGCCATCCAGACACCGCGCGGGATTTTATTGATATTCATCTTCCCGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP009273/2416990‑2416916

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcccgcgcGGTGTCTGGATGGCGTAAAAAAGATTTAAATACCGCATCATGCGGCGTGGAAGTTGTCGATATTGT  >  CP009273/2416950‑2417015

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 21 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.