| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 2416916 = | 486 (1.020) | 18 (0.040) | 11/96 | NT | 5.0% | coding (103/891 nt) | yfcI | transposase_31 family protein |
| ? | CP009273 | 2416950 = | 267 (0.660) | coding (69/891 nt) | yfcI | transposase_31 family protein | |||||
Only 100 of 735 total aligned reads displayed.
GGTCTTCATCAATAAAACTGTTTGGTTCCAGTTTAAGCGTCGTTAAAT‑‑CACACAGTTTGCGCAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGGTGTCTGGATGGCGTAAAAAAGATTTAAATACC > CP009273/2416850‑2416983 | gctctTGATCAATAAAACTGTTTGGTTCCTGTTTAAGCGTCGTTAAAT‑‑CACACAGTTTGCGCAGCGGC < 1:34867211‑M1/66‑1 (MQ=255) tCTTCATCAATAAAACTGTTTGGTTCCAGTTTAAGCGTCGTTAAAT‑‑CACACAGTTTGCGCAGCGGCGC > 1:13885345‑M1/1‑68 (MQ=255) acaatatcgacaacttccacgccgcatgatgcggtatttaaatcttttttacgccatccagacaccgc < 1:32895941‑M1/2‑1 (MQ=255) caatatcgacaacttccacgccgcatgatgcggtatttaaatcttttttacgccatccagacaccgc > 1:35027083‑M1/66‑67 (MQ=255) ttCATCAATAAAACTGTTTGGTTCCAGTTTAAGCGTCGTTAAAT‑‑CACACAGTTTGCGCAGCGGCGCGG < 1:22701079‑M1/68‑1 (MQ=255) atcgacaacttccacgccgcatgatgctgtatttaaatcttttttacgccatccagacaccGCGCggg > 1:2096521‑M1/62‑68 (MQ=255) atcgacaacttccacgccgcatgatgcggtatttaaatcttttttacgccatccagacaccGCGCggg < 1:22106834‑M1/7‑1 (MQ=255) atcgacaacttccacgccgcatgatgcggtatttaaatcttttttacgccatccagacaccGCGCggg > 1:36449211‑M1/62‑68 (MQ=255) atcgacaacttccacgccgcatgatgcggtatttaaatcttttttacgccatccagacaccGCGCggg < 1:19335686‑M1/7‑1 (MQ=255) atcgacaacttccacgccgcatgatgcggtatttaaatcttttttacgccatccagacaccGCGCggg > 1:32215560‑M1/62‑68 (MQ=255) tcaATAAAACTGTTTGGTTCCAGTTTAAGCGTCGTTAAAT‑‑CACACAGTTTGCGCAGCGGCGCGGGAAg > 1:14077273/1‑68 (MQ=255) caATAAAACTGTTTGGTTCCAGTTTAAGCGTCGTTAAAT‑‑CACACAGTTTGCGCAGCGGCGCGGGAAGa < 1:18857705/68‑1 (MQ=255) caATAAAACTGTTTGGTTCCAGTTTAAGCGTCGTTAAAT‑‑CACACAGTTTGCGCAGCGGCGCGGGAAGa > 1:24142943/1‑68 (MQ=255) caATAAAACTGTTTGGTTCCAGTTTAAGCGTCGTTAAAT‑‑CACACAGTTTGCGCAGCGGCGCGGGAAGa < 1:17628768/68‑1 (MQ=255) aCTGTTTGGTTCCAGTTTAAGCGTCGTTAAAT‑‑CACACAGTTTGCGCAGCGGCGCGGGAAGATGAata > 1:33432632/1‑67 (MQ=255) aCTGTTTGGTTCCAGTTTAAGCGTCGTTAAAT‑‑CACACAGTTTGCGCAGCGGCGCGGGAAGATGAata > 1:17996327/1‑67 (MQ=255) tGTTTGGTTCCAGTTTAAGCGTCGTTAAAT‑‑CACACAGTTTGCGCAGCGGCGCGGGAAGATGAATATCa < 1:4891634/68‑1 (MQ=255) tGTTTGGTTCCAGTTTAAGCGTCGTTAAAT‑‑CACACAGTTTGCGCAGCGGCGCGGGAAGATGAATATCa < 1:39340472/68‑1 (MQ=255) ttGGTTCCAGTTTAAGCGTCGTTAAAT‑‑CACACAGTTTGCGCAGCGGCGCGGGAAGATGAATATCAAt < 1:20405098/67‑1 (MQ=255) ttGGTTCCAGTTTAAGCGTCGTTAAAT‑‑CACACAGTTTGCGCAGCGGCGCGGGAAGATGAATATCAAt < 1:8677243/67‑1 (MQ=255) ttGGTTCCAGTTTAAGCGTCGTTAAAT‑‑CACACAGTTTGCGCAGCGGCGCGGGAAGATGAATATCAAt < 1:15502412/67‑1 (MQ=255) ttGGTTCCAGTTTAAGCGTCGTTAAAT‑‑CACACAGTTTGCGCAGCGGCGCGGGAAGATGAATATCAAt < 1:28538782/67‑1 (MQ=255) gTTCCAGTTTAAGCGTCGTTAAAT‑‑CACACAGTTTGCGCAGCGGCGCGGGAAGATGAATATCAATaaaa > 1:13013776/1‑68 (MQ=255) catgatgcggtatttaaatcttttttacgccatccagacaccGCGCggg > 1:34540475‑M1/43‑49 (MQ=255) ttAAGCGTCGTTAAAT‑‑CACACAGTTTGCGCAGCGGCGCGGGAAGATGAATATCAATAAAcccgc > 1:28226010‑M2/1‑60 (MQ=255) aGCGTCGTTAAAT‑‑CACACAGTTTGCGCAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGgt < 1:23482709/68‑1 (MQ=255) aGCGTCGTTAAAT‑‑CACACAGTTTGCGCAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGgt < 1:24956033/68‑1 (MQ=255) aGCGTCGTTAAAT‑‑CACACAGTTTGCGCAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGgt < 1:23265076/68‑1 (MQ=255) aGCGTCGTTAAAT‑‑CACACAGTTTGCGCAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGgt < 1:26265077/68‑1 (MQ=255) aGCGTCGTTAAAT‑‑CACACAGTTTGCGCAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGgt < 1:26859656/68‑1 (MQ=255) aGCGTCGTTAAAT‑‑CACACAGTTTGCGCAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGgt < 1:2982968/68‑1 (MQ=255) aGCGTCGTTAAAT‑‑CACACAGTTTGCGCAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGgt < 1:3050382/68‑1 (MQ=255) aGCGTCGTTAAAT‑‑CACACAGTTTGCGCAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGgt < 1:3158733/68‑1 (MQ=255) aGCGTCGTTAAAT‑‑CACACAGTTTGCGCAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGgt < 1:21409359/68‑1 (MQ=255) aGCGTCGTTAAAT‑‑CACACAGTTTGCGCAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGgt < 1:10267224/68‑1 (MQ=255) aGCGTCGTTAAAT‑‑CACACAGTTTGCGCAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGgt < 1:1197282/68‑1 (MQ=255) aGCGTCGTTAAAT‑‑CACACAGTTTGCGCAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGgt < 1:7681906/68‑1 (MQ=255) aGCGTCGTTAAAT‑‑CACACAGTTTGCGCAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGgt < 1:13362924/68‑1 (MQ=255) aGCGTCGTTAAAT‑‑CACACAGTTTGCGCAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGgt < 1:19753885/68‑1 (MQ=255) aGCGTCGTTAAAT‑‑CACACAGTTTGCGCAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGgt < 1:14614164/68‑1 (MQ=255) aGCGTCGTTAAAT‑‑CACACAGTTTGCGCAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGgt < 1:7559744/68‑1 (MQ=255) aGCGGCGTTAAAT‑‑CACACAGTTTGCGCAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGgt < 1:21865925/68‑1 (MQ=255) aGCGGCGTTAAAT‑‑CACACAGTTTGCGCAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGgt < 1:19882270/68‑1 (MQ=255) cgtcgtTAAAT‑‑CACACAGTTTGCGCAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGgtg > 1:30120856/1‑67 (MQ=255) cgtcgtTAAAT‑‑CACACAGTTTGCGCAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGgtg > 1:11248525/1‑67 (MQ=255) cgtcgtTAAAT‑‑CACACAGTTTGCGCAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGgtg > 1:2731454/1‑67 (MQ=255) gtcgtTAAATCACACACAGTTTGCGCAGCGGCGCGGGAAGATGAATATAAATAAAATCCCGCGCGgt < 1:24544307/67‑1 (MQ=255) gtcgtTAAAT‑‑CACACAGTTTGCGCAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGgtgt < 1:15037851/67‑1 (MQ=255) gtcgtTAAAT‑‑CACACAGTTTGCGCAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGgtgt < 1:36092437/67‑1 (MQ=255) gtcgtTAAAT‑‑CACACAGTTTGCGCAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGgtgt < 1:10041394/67‑1 (MQ=255) gtcgtTAAAT‑‑CACACAGTTTGCGCAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGgtg < 1:9708833/66‑1 (MQ=255) gtcgtTAAAT‑‑CACACAGTTTGCGCAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGgtg < 1:31921813/66‑1 (MQ=255) gtcgtTAAAT‑‑CACACAGTTTGCGCAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGgtg < 1:35341487/66‑1 (MQ=255) gtcgtTAAAT‑‑CACACAGTTTGCGCAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGgtg < 1:7966313/66‑1 (MQ=255) gtcgtTAAAT‑‑CACACAGTTTGCGCAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGgtg < 1:37494251/66‑1 (MQ=255) gtcgtTAAAT‑‑CACACAGTTTGCGCAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGgtg < 1:33290071/66‑1 (MQ=255) gtcgtTAAAT‑‑CACACAGTTTGCGCAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGgtg < 1:37827112/66‑1 (MQ=255) gtcgtTAAAT‑‑CACACAGTTTGCGCAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGgtg < 1:5963091/66‑1 (MQ=255) gtcgtTAAAT‑‑CACACAGTTTGCGCAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGgtg < 1:34010612/66‑1 (MQ=255) gtcgtTAAAT‑‑CACACAGTTTGCGCAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGgtg < 1:7076396/66‑1 (MQ=255) gtcgtTAAAT‑‑CACACAGTTTGCGCAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGgtg < 1:6633166/66‑1 (MQ=255) gtcgtTAAAT‑‑CACACAGTTTGCGCAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGgtg < 1:30911418/66‑1 (MQ=255) gtcgtTAAAT‑‑CACACAGTTTGCGCAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGgtg < 1:10981795/66‑1 (MQ=255) gtcgtTAAAT‑‑CACACAGTTTGCGCAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGgtg < 1:12249896/66‑1 (MQ=255) gtcgtTAAAT‑‑CACACAGTTTGCGCAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGgtg < 1:15915695/66‑1 (MQ=255) gtcgtTAAAT‑‑CACACAGTTTGCGCAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGgtg < 1:18478487/66‑1 (MQ=255) gtcgtTAAAT‑‑CACACAGTTTGCGCAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGgtg < 1:22915889/66‑1 (MQ=255) gtcgtTAAAT‑‑CACACAGTTTGCGCAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGgtg < 1:2657629/66‑1 (MQ=255) gtcgtTAAAT‑‑CACACAGTTTGCGCAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGgtg < 1:31294236/66‑1 (MQ=255) gtcgtTAAAA‑‑CACACAGTTTGCGCAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGgtg < 1:38342680/66‑1 (MQ=255) cgtAAAAT‑‑CACACAGTTTGCGCAGCGGCGCGGGAAGATTAATATCAATAAAAtcccgcgccgctgcg > 1:8404269‑M2/1‑52 (MQ=255) aaaT‑‑CACACAGTTTGCGCAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGGTGTCTGGATg > 1:6351044/1‑68 (MQ=255) aaa‑‑CACACAGTTTGCGCCGCGGCGCGGGAAGATCAATATCAATAAAAccccgcgccgctgcgcaaact > 1:26961673‑M2/1‑47 (MQ=255) aT‑‑CACACAGTTTGCGCAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGGTGTCTGGATGGc < 1:5545986/68‑1 (MQ=255) aT‑‑CACACAGTTTGCGCAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGGTGTCTGGATGGc < 1:12517430/68‑1 (MQ=255) aT‑‑CACACAGTTTGCGCAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGGTGTCTGGATGGc > 1:32429447/1‑68 (MQ=255) acaGTTTGCGCAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGGTGTCTGGATGGCGTaaa > 1:28992337/1‑68 (MQ=255) acaGTTTGCGCAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGGTGTCTGGATGGCGTaaa > 1:21144404/1‑68 (MQ=255) acaGTTTGCGCAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGGTGTCTGGATGGCGTaaa > 1:16249640/1‑68 (MQ=255) ttGCGCAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGGTGTCTGGATGGCGTAAAAAAGa < 1:33624416/68‑1 (MQ=255) ttGCGCAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGGTGTCTGGATGGCGTAAAAAAGa < 1:16383443/68‑1 (MQ=255) ttGCGCAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGGTGTCTGGATGGCGTAAAAAAGa < 1:22482754/68‑1 (MQ=255) tGCGCAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGGTGTCTGGATGGCGTAAAAAAGAt > 1:36907702/1‑68 (MQ=255) gcgcAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGGTGTCTGGATGGCGTAAAAAAGAtt < 1:10780341/68‑1 (MQ=255) gcgcAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGGTGTCTGGATGGCGTAAAAAAGAtt < 1:16777369/68‑1 (MQ=255) cgcAGCGGCGCGGGAttttattgatattcatcttcccgcgccggggcgcaaactgtgtgcttttacg > 1:9132972‑M1/1‑15 (MQ=255) cgcAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGGTGTCTGGATGGCGTAAAAAAGAttt > 1:39052924/1‑68 (MQ=255) cgcAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGGTGTCTGGATGGCGTAAAAAAGAttt > 1:38611202/1‑68 (MQ=255) cgcAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGGTGTCTGGATGGCGTAAAAAAGAttt > 1:27689978/1‑68 (MQ=255) cgcAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGGTGTCTGGATGGCGTAAAAAAGAttt > 1:20168411/1‑68 (MQ=255) cgcAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGGTGTCTGGATGGCGTAAAAAAGAttt > 1:35751294/1‑68 (MQ=255) cAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGGTGTCTGGATGGCGTAAAAAAGATTTaa > 1:34302512/1‑68 (MQ=255) cAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGGTGTCTGGATGGCGTAAAAAAGATTTaa > 1:25921475/1‑68 (MQ=255) gcggcgCGGGAAGATGAATATCAATAAAATCCCGCGCGGTGTCTGGATGGCGTAAAAAAGATTTAAAt > 1:17254104/1‑68 (MQ=255) accGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGGTGTCTGGATGGCGTAAAAAAGATTTAAAt < 1:39634494‑M1/65‑1 (MQ=255) accGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGGTGTCTGGATGGCGTAAAAAAGATTTAAAt < 1:14793268‑M1/65‑1 (MQ=255) accGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGGTGTCTGGATGGCGTAAAAAAGATTTAAAt < 1:9575956‑M1/65‑1 (MQ=255) ggcgCGGGAAGATGAATATCAATAAAATCCCGCGCGGTGTCTGGATGGCGTAAAAAAGATTTAAAt < 1:20568061/66‑1 (MQ=255) ggcgCGGGAAGATGAATATCAATAAAATCCCGCGCGGTGTCTGGATGGCGTAAAAAAGATTTAAAt < 1:25389529/66‑1 (MQ=255) ggcgCGGGAAGATGAATATCAATAAAATCCCGCGCGGTGTCTGGATGGCGTAAAAAAGATTTAAAt < 1:25742874/66‑1 (MQ=255) | GGTCTTCATCAATAAAACTGTTTGGTTCCAGTTTAAGCGTCGTTAAAT‑‑CACACAGTTTGCGCAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGGTGTCTGGATGGCGTAAAAAAGATTTAAATACC > CP009273/2416850‑2416983 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |