| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 2416916 = | 486 (1.020) | 18 (0.040) | 11/96 | NT | 5.0% | coding (103/891 nt) | yfcI | transposase_31 family protein |
| ? | CP009273 | 2416950 = | 267 (0.660) | coding (69/891 nt) | yfcI | transposase_31 family protein | |||||
Only 100 of 758 total aligned reads displayed.
TAAGCGTCGTTAAATCACACAGTTTGCGCAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGGTGTCTGGATGGCGTAAAAAAGATTTAAATACCGCATCATGCGGCGTGGAAGTTGTCGATATTGT > CP009273/2416883‑2417015 | atttaaatcttttttccgccatccagacaccgcgcgggattttattgatattcatcttcccgcgcGgt < 1:14358783‑M2/3‑1 (MQ=255) atttaaatcttttttacgccatccagacaccgcgcgggattttattgatattcatcttcccgcgcGgt < 1:24012188‑M2/3‑1 (MQ=255) aGCGTCGTTAAATCACACAGTTTGCGCAGCGGCGCGGTAAGATGAATATCAATAAAATCCCGCGCGgt < 1:22658539/68‑1 (MQ=255) aGCGTCGTTAAATCACACAGTTTGCGCAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGgt < 1:24812980/68‑1 (MQ=255) aGCGTCGTTAAATCACACAGTTTGCGCAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGgt < 1:37762850/68‑1 (MQ=255) aGCGTCGTTAAATCACACAGTTTGCGCAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGgt < 1:26308147/68‑1 (MQ=255) aGCGTCGTTAAATCACACAGTTTGCGCAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGgt < 1:2982968/68‑1 (MQ=255) aGCGTCGTTAAATCACACAGTTTGCGCAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGgt < 1:25963891/68‑1 (MQ=255) aGCGTCGTTAAATCACACAGTTTGCGCAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGgt < 1:6763495/68‑1 (MQ=255) aGCGTCGTTAAATCACACAGTTTGCGCAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGgt < 1:7203278/68‑1 (MQ=255) aGCGTCGTTAAATCACACAGTTTGCGCAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGgt < 1:31237856/68‑1 (MQ=255) aGCGTCGTTAAATCACACAGTTTGCGCAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGgt < 1:19041646/68‑1 (MQ=255) aGCGTCGTTAAATCACACAGTTTGCGCAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGgt < 1:8947978/68‑1 (MQ=255) aGCGTCGTTAAATCACACAGTTTGCGCAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGgt > 1:33784872/1‑68 (MQ=255) aGCGTCGTTAAATCACACAGTTTGCGCAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGgt < 1:11620615/68‑1 (MQ=255) aGCGTCGTTAAATCACACAGTTTGCGCAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGgt < 1:10950717/68‑1 (MQ=255) aGCGTCGTTAAATCACACAGTTTGCGCAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGgt < 1:21704310/68‑1 (MQ=255) tttaaatcttttttacgccatccagacaccgcgcgggattttattgatattcatcttcccgcgcGgtg < 1:2250814‑M2/4‑1 (MQ=255) cgtcgtTAAATCACACAGTTTGCGCAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGgtg > 1:34501962/1‑67 (MQ=255) cgtcgtTAAATCACACAGTTTGCGCAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGgtg > 1:12235306/1‑67 (MQ=255) gtcgtTAAATCACACAGTTTGCGCAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGgtgt < 1:10041394/67‑1 (MQ=255) gtcgtTAAATCACACAGTTTGCGCAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGgtgt < 1:176719/67‑1 (MQ=255) gtcgtTAAATCACACAGTTTGCGCAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGgtgt < 1:15037851/67‑1 (MQ=255) gtcgtTAAATCACACAGTTTGCGCAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGgtgt < 1:8069160/67‑1 (MQ=255) gtcgtTAAATCACACAGTTTGCGCAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGgtgt < 1:37873951/67‑1 (MQ=255) gtcgtTAAATCACACAGTTTGCGCAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGgtgt < 1:25239255/67‑1 (MQ=255) gtcgtTAAATCACACAGTTTGCGCAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGgtg < 1:3713376/66‑1 (MQ=255) gtcgtTAAATCACACAGTTTGCGCAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGgtg < 1:28363557/66‑1 (MQ=255) gtcgtTAAATCACACAGTTTGCGCAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGgtg < 1:29463591/66‑1 (MQ=255) gtcgtTAAATCACACAGTTTGCGCAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGgtg < 1:31921813/66‑1 (MQ=255) gtcgtTAAATCACACAGTTTGCGCAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGgtg < 1:33475233/66‑1 (MQ=255) gtcgtTAAATCACACAGTTTGCGCAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGgtg < 1:23271597/66‑1 (MQ=255) gtcgtTAAATCACACAGTTTGCGCAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGgtg < 1:34010612/66‑1 (MQ=255) gtcgtTAAATCACACAGTTTGCGCAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGgtg < 1:9629515/66‑1 (MQ=255) gtcgtTAAATCACACAGTTTGCGCAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGgtg < 1:6190376/66‑1 (MQ=255) gtcgtTAAATCACACAGTTTGCGCAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGgtg < 1:20591327/66‑1 (MQ=255) gtcgtTAAATCACACAGTTTGCGCAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGgtg < 1:8570582/66‑1 (MQ=255) gtcgtTAAATCACACAGTTTGCGCAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGgtg < 1:18219672/66‑1 (MQ=255) gtcgtTAAATCACACAGTTTGCGCAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGgtg < 1:19867256/66‑1 (MQ=255) gtTAAATCACACAGTTTGCGCAGCGGCGCGGGAAGATGAATATCAATAAACTCCCGCGCGGTGTCTgg < 1:11926278/68‑1 (MQ=255) ttttacgccatccagacaccgcgcgggattttattgatattcatcatcccgcgcGGTGTCTGGATGGc < 1:388563‑M2/14‑1 (MQ=255) aTCACACAGTTTGCGCAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGGTGTCTGGATGGc > 1:21897411/1‑68 (MQ=255) aTCACACAGTTTGCGCAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGGTGTCTGGATGGc > 1:30696849/1‑68 (MQ=255) aTCACACAGTTTGCGCAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGGTGTCTGGATGGc > 1:30207067/1‑68 (MQ=255) aTCACACAGTTTGCGCAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGGTGTCTGGATGGc > 1:17231592/1‑68 (MQ=255) aTCACACAGTTTGCGCAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGGTGTCTGGATGGc < 1:12690480/68‑1 (MQ=255) aTCACACAGTTTGCGCAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGGTGTCTGGATGGc > 1:20339815/1‑68 (MQ=255) aTCACACAGTTTGCGCAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGGTGTCTGGATGGc > 1:38181474/1‑68 (MQ=255) acaGTTTGCGCAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGGTGTCTGGATGGCGTaaa > 1:39100076/1‑68 (MQ=255) acaGTTTGCGCAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGGTGTCTGGATGGCGTaaa > 1:24515221/1‑68 (MQ=255) acaGTTTGCGCAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGGTGTCTGGATGGCGTaaa > 1:21144404/1‑68 (MQ=255) aGTTTGCGCAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGGTGTCTGGATGGCGTaaaaa > 1:33277627/1‑68 (MQ=255) ttGCGCAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGGTGTCTGGATGGCGTAAAAAAGa < 1:16335076/68‑1 (MQ=255) ttGCGCAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGGTGTCTGGATGGCGTAAAAAAGa < 1:4944941/68‑1 (MQ=255) tGCGCAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGGTGTCTGGATGGCGTAAAAAAGAt > 1:32420353/1‑68 (MQ=255) gcgcAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGGTGTCTGGATGGCGTAAAAAAGAtt < 1:36247354/68‑1 (MQ=255) gcgcAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGGTGTCTGGATGGCGTAAAAAAGAtt < 1:15790416/68‑1 (MQ=255) gcgcAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGGTGTCTGGATGGCGTAAAAAAGAtt < 1:30503848/68‑1 (MQ=255) cgcAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGGTGTCTGGa > 1:10727304/1‑51 (MQ=255) cgcAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGGTGTCTGGATGGCGTAAAAAAGAttt > 1:20180636/1‑68 (MQ=255) cgcAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGGTGTCTGGATGGCGTAAAAAAGAttt > 1:23593014/1‑68 (MQ=255) cAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGGTGTCTGGATGGCGTAAAAAAGATTTaa > 1:34302512/1‑68 (MQ=255) cAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGGTGTCTGGATGGCGTAAAAAAGATTTaa > 1:35752624/1‑68 (MQ=255) cAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGGTGTCTGGATGGCGTAAAAAAGATTTaa > 1:36727470/1‑68 (MQ=255) cAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGGTGTCTGGATGGCGTAAAAAAGATTTaa > 1:34949806/1‑68 (MQ=255) acaccGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGGTGTCTGGATGGCGTAAAAAAGATTTaa < 1:4431170‑M1/63‑1 (MQ=255) caccGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGGTGTCTGGATGGCGTAAAAAAGATTTaaa < 1:35420310‑M1/64‑1 (MQ=255) caccGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGGTGTCTGGATGGCGTAAAAAAGATTTaaa < 1:18678645‑M1/64‑1 (MQ=255) caccGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGGGGTCTGGATGGCGTAAAAAAGATTTaaa < 1:38521545‑M1/64‑1 (MQ=255) gcggcgCGGGAAGATGAATATCAATAAAATCCCGCGCGGTGTCTGGATGGCGTAAAAAAGATTTAAAt > 1:13836470/1‑68 (MQ=255) accgcgcgggattttattgatattcatcttcccgcgcGGTGTCTGGATGGCGTAAAAACGATTTAAAt < 1:27285968‑M2/31‑1 (MQ=255) accGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGGTGTCTGGATGGCGTAAAAAAGATTTAAAt < 1:12382351‑M1/65‑1 (MQ=255) accGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGGTGTCTGGATGGCGTAAAAAAGATTTAAAt < 1:14793268‑M1/65‑1 (MQ=255) accGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGGTGTCTGGATGGCGTAAAAAAGATTTAAAt < 1:19598911‑M1/65‑1 (MQ=255) ggcgCGGGAAGATGAATATCAATAAAATCCCGCGCGGTGTCTGGATGGCGTAAAAAAGATTTAAAt < 1:25742874/66‑1 (MQ=255) gcgggattaaactgacattccccttcccgcgcGGTGTCTGGATGGCGTAAAAAAGATTTAAATACCGc < 1:7680340‑M2/36‑1 (MQ=255) gggattttattgatattcatcttcccgcgcGGTGTCTGGATGGCGTAAAAAAGATTTAAATACCGcat < 1:5234375‑M2/38‑1 (MQ=255) gggattttattgatattcatcttcccgcgcGGTGTCTGGATGGCGTAAAAAAGATTTAAATACCGcat < 1:32873276‑M2/38‑1 (MQ=255) GGGAAGATGAATATCAATAAAATCCCGCGCGGTGTCTGGATGGCGTAAAAAAGATTTAAATACCGcat > 1:5782068‑M1/1‑68 (MQ=255) aGATGAATATCAATAAAATCCCGCGCGGTGTCTGGATGGCGTAAAAAAGATTTAAATACCGcatcat < 1:12984911/67‑1 (MQ=255) gAATATCAATAAAATCCCGCGCGGTGTCTGGATGGCGTAAAAAAGATTTAAATACCGCATCATgcggc < 1:35301370/68‑1 (MQ=255) gAATATCAATAAAATCCCGCGCGGTGTCTGGATGGCGTAAAAAAGATTTAAATACCGCATCATgcggc < 1:16117859/68‑1 (MQ=255) gAATATCAATAAAATCCCGCGCGGTGTCTGGATGGCGTAAAAAACATTTAAATACCGCATCATgcgg > 1:9465197/1‑67 (MQ=255) atatCAATAAAATCCCGCGCGGTGTCTGGATGGCGTAAAAAAGATTTAAATACCGCATCATGCGGCGt < 1:16952042/68‑1 (MQ=255) atCAATAAAATCCCGCGCGGTGTCTGGATGGCGTAAAAAAGATTTAAATACCGCATCATGCGGCGTgg > 1:7511903/1‑68 (MQ=255) atCAATAAAATCCCGCGCGGTGTCTGGATGGCGTAAAAAAGATTTAAATACCGCATCATGCGGCGTgg > 1:28882487/1‑68 (MQ=255) aTAAAATCCCGCGCGGTGTCTGGATGGCGTAAAAAAGATTTAAATACCGCATCATGCGGCGTGGAAGt < 1:14008232/68‑1 (MQ=255) aaTCCCGCGCGGTGTCTGGATGGCGTAAAAAAGATTTAAATACCGCATCATGCGGCGTGGAAGTTGTc > 1:22908974/1‑68 (MQ=255) cccgcgcGGTGTCTGGATGGCGTAATACAGATTTAAATACCGCATGATGCGGCGTGGAAGTTGTCGat > 1:26603555‑M2/8‑68 (MQ=255) cccgcgcGGTGTCTGGATGGCGTAAAAAAGATTTAAATACCGCATCATGCGGCGTGGAAGTTGTCGat > 1:39514158‑M2/8‑68 (MQ=255) cccgcgcGGTGTCTGGATGGCGTAAAAAAGATTTAAATACCGCATCATGCGGCGTGGAAGTTGTCGat < 1:22106834‑M2/61‑1 (MQ=255) cccgcgcGGTGTCTGGATGGCGTAAAAAAGATTTAAATACCGCATCATGCGGCGTGGAAGTTGTCGat > 1:26929876‑M2/8‑68 (MQ=255) cccgcgcGGTGTCTGGATGGCGTAAAAAAGATTTAAATACCGCATCATGCGGCGTGGAAGTTGTCGat > 1:13349041‑M2/8‑68 (MQ=255) cccgcgcGGTGTCTGGATGGCGTAAAAAAGATTTAAATACAGCATCATGCGGCGTGGAAGTTGTCGat > 1:2096521‑M2/8‑68 (MQ=255) gcgcGGTGTCTGGATGGCGTAAAAAAGATTTAAATACCGCATCATGCGGCGTGGAAGTTGTCGATAtt < 1:6555643‑M2/64‑1 (MQ=255) gcgcGGTGTCTGGATGGCGTAAAAAAGATTTAAATACCGCATCATGCGGCGTGGAAGTTGTCGATAtt < 1:27643853‑M2/64‑1 (MQ=255) gcgcGGTGTCTGGATGGCGTAAAAAAGATTTAAATACCGCATCATGCGGCGTGGAAGTTGTCGATAtt < 1:10152094‑M2/64‑1 (MQ=255) gcGGTGTCTGGATGGCGTAAAAAAGATTTAAATACCGCATCATGCGGCGTGGAAGTTGTCGATATTGt < 1:15390707‑M2/66‑1 (MQ=255) gcGGTGTCTGGATGGCGTAAAAAAGATTTAAATACCGCATCATGCGGCGTGGAAGTTGTCGATATTGt < 1:31568786‑M2/66‑1 (MQ=255) gcGGTGTCTGGATGGCGTAAAAAAGATTTAAATACCGCATCATGCGGCGTGGAAGTTGTCGATATTGt < 1:32193222‑M2/66‑1 (MQ=255) | TAAGCGTCGTTAAATCACACAGTTTGCGCAGCGGCGCGGGAAGATGAATATCAATAAAATCCCGCGCGGTGTCTGGATGGCGTAAAAAAGATTTAAATACCGCATCATGCGGCGTGGAAGTTGTCGATATTGT > CP009273/2416883‑2417015 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |