BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 3015939	513 (1.080)	33 (0.080)	14/96	NT	7.4%	coding (1265/2871 nt)	xdhD	putative hypoxanthine oxidase, molybdopterin‑binding/Fe‑S binding
*	?	CP009273	= 3015996	385 (0.950)	33 (0.080)	14/96	NT	7.4%	coding (1322/2871 nt)	xdhD	putative hypoxanthine oxidase, molybdopterin‑binding/Fe‑S binding

Only 100 of 176 total aligned reads displayed.

CTGCTTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCCGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP009273/3015865‑3015939

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccgccaACTCGCTCTTTAATGACATGAACTTTATGCTGTTTCATGCCCACGAGGCGCGCGACCTGGCGGCGT  <  CP009273/3015996‑3015931

CTGCTTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCCCCCAGGTACCATGGCACTTAC                                                                           >  1:12813935/1‑68

CTGCTTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTAC                                                                           >  1:3066057/1‑68

CTGCTTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTAC                                                                           >  1:17885867/1‑68

 TGCTTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACG                                                                          <  1:38406096/68‑1

 TGCTTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTAC                                                                           >  1:34698564/1‑67

  GCTTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTTCCATGGCACTTACG                                                                          >  1:9154312/1‑67

  GCTTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACG                                                                          >  1:21379451/1‑67

  GCTTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACG                                                                          >  1:27762985/1‑67

  GCTTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACG                                                                          >  1:34120508/1‑67

  GCTTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACG                                                                          >  1:34848696/1‑67

  GCTTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACG                                                                          >  1:36407028/1‑67

  GCTTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACG                                                                          >  1:12025505/1‑67

  GCTTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACG                                                                          >  1:5444522/1‑67

  GCTTTACTCGTATGGACGGCGATCGTCAGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACG                                                                          >  1:17844401/1‑67

    TTTACTGGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                        <  1:34680303/67‑1

    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCCG                                                                       <  1:18597156/68‑1

    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                        <  1:24929665/67‑1

    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                        >  1:7413761/1‑67

    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                        <  1:22582016/67‑1

    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                        <  1:21745234/67‑1

    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                        <  1:21418640/67‑1

    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                        <  1:33785679/67‑1

    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                        <  1:28352272/67‑1

    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                        <  1:293321/67‑1

    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                        <  1:30126221/67‑1

    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                        <  1:30188306/67‑1

    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                        >  1:3245948/1‑67

    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                        >  1:25618892/1‑67

    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                        <  1:3658097/67‑1

    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                        >  1:39139088/1‑67

    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                        <  1:5020243/67‑1

    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                        <  1:5170791/67‑1

    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                        <  1:5461200/67‑1

    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                        >  1:5519962/1‑67

    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                        <  1:21187369/67‑1

    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                        >  1:14666765/1‑67

    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                        >  1:15511330/1‑67

    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                        <  1:14214326/67‑1

    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                        >  1:7981549/1‑67

    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                        <  1:7755720/67‑1

    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                        <  1:16188709/67‑1

    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                        <  1:16880323/67‑1

    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                        <  1:13094749/67‑1

    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                        <  1:12407175/67‑1

    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                        <  1:19247628/67‑1

    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                        <  1:20414902/67‑1

    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                        <  1:11093065/67‑1

    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                        >  1:11446555/1‑67

    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCAACCAGGTACCATGGCACTTACGCC                                                                        >  1:33269725/1‑67

    TTTACTCGTATCGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                        <  1:28381117/67‑1

    TTTACTCGTATCGACGGCGATCGTCTGGGTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                        <  1:31021680/67‑1

     TTACTCGTATGGACGGCGATCTTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCCtc                                                                      <  1:10892246/68‑3

     TTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCCGC                                                                      <  1:34351791/68‑1

     TTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCCGC                                                                      <  1:771722/68‑1

     TTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCCGC                                                                      <  1:16256438/68‑1

     TTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCCGC                                                                      <  1:4210506/68‑1

     TTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCCGC                                                                      <  1:26889157/68‑1

     TTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCCGC                                                                      <  1:24831201/68‑1

      TACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCCGCC                                                                     >  1:6152179/1‑68

       ACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCCGCCA                                                                    >  1:10141741/1‑68

                                   TCCACGCCTCCACCCAGGTACCATGGCACTTACGCCGCCAACTCGCTCTTTAATGACATGAACTTTAT                                        <  1:7277442/68‑1

                                   TCCACGCCTCCACCCAGGTACCATGGCACTTACGCCGCCAACTCGCGCGTTAATGACATGAACTTTAT                                        >  1:29587196/1‑68

                                         CCTCCACCCCGGTACCATGGCACTTACGCCGCCAACTCGGTGTTTAATGGCATGAAATTTTTGCTGTT                                  >  1:13314656/1‑68

                                         CCTCCACCCAGGTACCATGGCGCTTACGCCGCCAACTCGGGCGTTAATGACATGACCTGTATGCTGTT                                  >  1:20053715/1‑68

                                         CCTCCACCCAGGTACCATGGCACTTACGCCGCCCACTCGCTCGTTAATGACATGAACTTTAGGCTGTT                                  >  1:37629292/1‑68

                                         CCTCCACCCAGGTACCATGGCACTTACGCCGCCACCTCGCTCTTTAATGCCATGAACTTTATGCTGTT                                  >  1:38728564/1‑68

                                              ACCCAGGTACCATGGCACTTACGCCGCCAACTCGCTCTTTAATGACATGAACTTTATGCTGTTTCAT                              >  1:10298271/1‑67

                                                CCAGGTACCATGGCACTTACGCCGCCAACTCGCTCTTTAATGACATGAACTTTATGCTGTTTCATGC                            >  1:25937582/1‑67

                                                     TACCATGGCACTTACGCCGCCAACTCGCTCTTTAATGACATGAACTTTATGCTGTTTCATGCCCACGA                      >  1:6674438/1‑68

                                                      ACCATGGCACTTACGCCGCCAACTCGGTCTTTAATGACATGCTCTTTATGCTGGTTCATGCCCACGAG                     >  1:1167162/1‑68

                                                      ACCATGGCACTTACGCCGCCAACTCGCTCTTTAATGACATGAACTTTATGCTGTTTCCTGCCCACGAG                     >  1:30899821/1‑68

                                                      ACCATGGCACTTACGCCGCCAACTCGCTCTTTAATGACATGAACTTTATGCTGTTTCATGCCCACGAG                     >  1:32820363/1‑68

                                                      ACCATGGCACTTACGCCGCCAACTCGCTCTTTAATGACATGAACTTTATGCTGTTTCATGCCCACGAG                     >  1:2161647/1‑68

                                                      ACCATGGCACTTACGCCGCCAACTCGCTCTTTAATGACATGAACTTTATGCTGTTTCATGCCCACGAG                     >  1:10534041/1‑68

                                                      ACCATGGCACTTACGCCGCCAACTCGCTCTTTAATGACATGAACTTTATGCTGTTTCATGCCCACGAG                     >  1:31591511/1‑68

                                                        CATGGCACTTACGCCGCCAACTCGCTCTTTAATGACATGAACTTTATGCTGTTTCATGCCCACGAGGC                   >  1:28051717/1‑68

                                                         ATGGCACTTACGCCGCCATCTCGCTCGTTAATGACATGAACTTTATGCTGTTTCATGCGCACGAGGC                   >  1:4244751/1‑67

                                                         ATGGCACTTACGCCGCCAACTCGCTCTTTAATGACATGAACTTTATGCTGTTTCATGCCCACGAGGC                   >  1:22320673/1‑67

                                                          TGGCACTTACGCCGCCAACTCGCTCTTTAATGACATGAACTTTATGCTGTTTCATGCCCACGAGGCGC                 >  1:26539855/1‑68

                                                          TGGCACTAACGCCGCCAACTCGCTCTTTAATGACATGAACTTTCTGCTGTTTCATGCCCACGAGGCGC                 <  1:17417305/68‑1

                                                           GGCACTTACGCCGCCAACTCGCTCTTTAATGACATGAACTTTATGCTGTTTCATGCCCACGAGGCGC                 >  1:11914885/1‑67

                                                                   CGCCGCCATCTCGCTCTTTAATGACATGAACTTTATGCTGTTTCATGCCCACGAGGCGCGCGACCTGG        <  1:24571587/68‑1

                                                                   CGCCGCCAACTCGCTCTTTAATGACATGAACTTTATGCTGTTTCATGCCCACGAGGCGCGCGACCTGG        <  1:39004376/68‑1

                                                                   CGCCGCCAACTCGCTCTTTAATGACATGAACTTTATGCTGTTTCATGCCCACGAGGCGCGCGACCTGG        <  1:24616438/68‑1

                                                                   CGCCGCCAACTCGCTCTTTAATGACATGAACTTTATGCTGTTTCATGCCCACGAGGCGCGCGACCTGG        <  1:6936925/68‑1

                                                                   CGCCGCCAACTCGCTCTTTAATGACATGAACTTTATGCTGTTTCATGCCCACGAGGCGCGCGACCTG         >  1:13121413/1‑67

                                                                   CGCCGCCAACTCGCTCTTTAATGACATGAACTTTATGCTGTTTCATGCCCACGAGGCGCGCGACCTG         >  1:38093134/1‑67

                                                                    GCCGCCAACTCGCTCTTTAATGACATGCACTTTATGCTGTTTCATGCCCACGAGGCGCGCGACCTGGC       >  1:14740060/1‑68

                                                                    GCCGCCAACTCGCTCTTTAATGACATGAACTTTATGCTGTTTCATGCCCACGAGGCGCGCGACCTGGC       <  1:19633522/68‑1

                                                                       GCCAACTCGCTCTTTAATGACATGAACTTTATGCTGTTTCATGCCCACGAGGCGCGCGACCTGGCGGC    <  1:28013347/68‑1

                                                                       GCCAACTCGCTCTTTAATGACATGAACTTTATGCTGTTTCATGCCCACGAGGCGCGCGACCTGGCGGC    <  1:36436489/68‑1

                                                                       GCCAACTCGCTCTTTAATGACATGAACTTTATGCTGTTTCATGCCCACGAGGCGCGCGACCTGGCGGC    <  1:36055454/68‑1

                                                                       GCCAACTCGCTCTTTAATGACATGAACTTTATGCTGTTTCATGCCCACGAGGCGCGCGACCTGGCGGC    <  1:34673334/68‑1

                                                                       GCCAACTCGCTCTTTAATGACATGAACTTTATGCTGTTTCATGCCCACGAGGCGCGCGACCTGGCGGC    <  1:23955671/68‑1

                                                                       GCCAACTCGCTCTTTAATGACATGAACTTTATGCTGTTTCATGCCCACGAGGCGCGCGACCTGGCGGC    <  1:11194097/68‑1

                                                                       GCCAACTCGATCTTTAATGACATGAACTTTATGCTGTTTGATGCCCACGAGGCGCGCGACCTGGCGGC    <  1:16107867/68‑1

                                                                        CCAACTCGCTCTTTAATGACATGAACTTTATGCTGTTTCATGCCCACGAGGCGCGCGACCTGGCGGCG   >  1:23007298/1‑68

                                                                        CCAACTCGCTCTTTAATGACATGAACTTTATGCTGTTTCATGCCCACGAGGCGCGCGACCTGGCGGCG   >  1:9386349/1‑68

                                                                         CAACTCGCTCTTTAATGACATGAACTTTATGCTGTTTCATGCCCACGAGGCGCGCGACCTGGCGGCGT  <  1:34540154/68‑1

                                                                         CAACTCGCTCTTTAATGACATGAACTTTATGCTGTTTCATGCCCACGAGGCGCGCGACCTGGCGGCG   <  1:15837433/67‑1

CTGCTTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCCGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP009273/3015865‑3015939

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccgccaACTCGCTCTTTAATGACATGAACTTTATGCTGTTTCATGCCCACGAGGCGCGCGACCTGGCGGCGT  <  CP009273/3015996‑3015931

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.