| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 3015939 | 513 (1.080) | 33 (0.080) | 14/96 | NT | 7.4% | coding (1265/2871 nt) | xdhD | putative hypoxanthine oxidase, molybdopterin‑binding/Fe‑S binding |
| ? | CP009273 | = 3015996 | 385 (0.950) | coding (1322/2871 nt) | xdhD | putative hypoxanthine oxidase, molybdopterin‑binding/Fe‑S binding | |||||
Only 100 of 540 total aligned reads displayed.
ACGCCGCCAGGTCGCGCGCCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTG > CP009273/3015931‑3016063 | aCGCCGCCAGGTCGCGCGCCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTtg < 1:24655754‑M2/68‑3 (MQ=255)aCGCCGCCAGGTCGCGCGCCTCGTGGGCATGAAACAGCAGAAAGTTCATGTCATTAAAGAGCGAGTtg < 1:695834‑M2/68‑3 (MQ=255) cgccgcCAGGTCGCGCGCCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTtgg > 1:9386349‑M2/1‑65 (MQ=255) cgccgcCAGGTCGCGCGCCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTtgg > 1:32189825‑M2/1‑65 (MQ=255) cgccgcCAGGTCGCGCGCCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTtg < 1:15837433‑M2/67‑3 (MQ=255) gccgccAGGTCGCGCGCCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTtggc < 1:27758971‑M2/68‑5 (MQ=255) gccgccAGGTCGCGCGCCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTtggc < 1:28013347‑M2/68‑5 (MQ=255) cgccAGGTCGCGCGCCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTtggcg < 1:23953368‑M2/67‑6 (MQ=255) cAGGTCGCGCGCCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTtggcggcg > 1:13121413‑M2/1‑59 (MQ=255) cAGGTCGCGCGCCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGcggcgg < 1:29500373/68‑1 (MQ=255) gTCGCGCGCCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGttt > 1:32081113/1‑68 (MQ=255) gTCGCGCGCCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGttt > 1:18469750/1‑68 (MQ=255) gTCGCGCGCCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGttt > 1:36183166/1‑68 (MQ=255) gTCGCGCGCCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGttt > 1:20222979/1‑68 (MQ=255) gTCGCGCGCCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGttt > 1:17315700/1‑68 (MQ=255) gTCGCGCGCCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGttt > 1:23784427/1‑68 (MQ=255) gTCGCGCGCCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGttt > 1:23099328/1‑68 (MQ=255) gTCGCGCGCCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGttt > 1:1499340/1‑68 (MQ=255) gTCGCGCGCCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGttt > 1:4666422/1‑68 (MQ=255) gTCGCGCGCCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGttt > 1:26898951/1‑68 (MQ=255) gTCGCGCGCCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTGGGCGGCGGttt > 1:39057867/1‑68 (MQ=255) gcgcCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTtggcggcgtaagtgcc > 1:610787‑M2/1‑51 (MQ=255) gcgcCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGt < 1:19853806/67‑1 (MQ=255) gcCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTtggcggcgtaagtgccat > 1:22320673‑M2/1‑49 (MQ=255) gcCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTcc > 1:18866780/1‑68 (MQ=255) cTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAACGCGCGAGTtggcggcgtaagtgccatggt > 1:5517046‑M2/1‑47 (MQ=255) cTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTtggcggcgtaagtgccatggt > 1:31591511‑M2/1‑47 (MQ=255) cTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTtggcggcgtaagtgccatggt > 1:10534041‑M2/1‑47 (MQ=255) cTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTtggcggcgtaagtgccatggt > 1:2161647‑M2/1‑47 (MQ=255) cTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCaa < 1:35960767/68‑1 (MQ=255) cTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCaa < 1:33936856/68‑1 (MQ=255) cTCGTGGGCAGGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTtggcggcgtaagtgccatggt > 1:30899821‑M2/1‑47 (MQ=255) gTGGGCATGAAACTGCATAAAGTTCATGTCATTAAAGAGCGAGTtggcggcgtaagtgccatggtacc > 1:17038410‑M2/1‑44 (MQ=255) gTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACa < 1:17658854/68‑1 (MQ=255) tGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAg > 1:9879976/1‑68 (MQ=255) tGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAg > 1:38351305/1‑68 (MQ=255) gggCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAgg < 1:12286430/68‑1 (MQ=255) gggCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAg < 1:37280016/67‑1 (MQ=255) gggCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAg < 1:7990069/67‑1 (MQ=255) ggCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAgg > 1:27547494/1‑67 (MQ=255) ggCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAgg > 1:29934459/1‑67 (MQ=255) ggCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAgg > 1:29030799/1‑67 (MQ=255) ggCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAgg > 1:24930422/1‑67 (MQ=255) ggCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAgg > 1:24338134/1‑67 (MQ=255) ggCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAgg > 1:32749591/1‑67 (MQ=255) ggCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAgg > 1:34786404/1‑67 (MQ=255) ggCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAgg > 1:38521038/1‑67 (MQ=255) ggCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAgg > 1:39219861/1‑67 (MQ=255) ggCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAgg > 1:13534909/1‑67 (MQ=255) gCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTtggcggcgtaagtgccatggtacctgg > 1:25937582‑M2/1‑40 (MQ=255) gCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGAc > 1:34508753/1‑68 (MQ=255) aTGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTtggcggcgtaagtgccatggtacctgggt > 1:10298271‑M2/1‑38 (MQ=255) aTGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACa > 1:11964436/1‑67 (MQ=255) aTGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACAt < 1:6761183/68‑1 (MQ=255) aaCAGCATAAAGTTCATGGCATTAAAGAGCGAGGtggcggcgtaagtgccatggtacctgggtggagg > 1:38728564‑M2/1‑34 (MQ=255) aCAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCctgc < 1:10022275/68‑1 (MQ=255) aCAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCctgc < 1:30197902/68‑1 (MQ=255) aCAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCctgc < 1:27210066/68‑1 (MQ=255) aCAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCctgc < 1:31003857/68‑1 (MQ=255) aCAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCctgc < 1:4222699/68‑1 (MQ=255) aCAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCctgc < 1:19255542/68‑1 (MQ=255) aCAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCct > 1:827861/1‑66 (MQ=255) aTAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCctgctg < 1:12707712/65‑1 (MQ=255) aTAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCctgctg < 1:16148948/65‑1 (MQ=255) aTAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGgaa > 1:28202564/1‑68 (MQ=255) aTAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGgaa > 1:34967583/1‑68 (MQ=255) aTAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGgaa > 1:31868575/1‑68 (MQ=255) aTAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGga < 1:28806874/67‑1 (MQ=255) aTAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGga < 1:14156003/67‑1 (MQ=255) aTAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGga < 1:3965951/67‑1 (MQ=255) aTAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGga < 1:21833040/67‑1 (MQ=255) aTAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGga < 1:22742147/67‑1 (MQ=255) aTAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGga < 1:37417443/67‑1 (MQ=255) aTAAAGTTCATGTCATTAAACAGCGAGTtggcggcgtaagtgccatggtacctgggtggaggcgtg > 1:26379767‑M2/1‑28 (MQ=255) gTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAgt > 1:36375203/1‑68 (MQ=255) gTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAgt > 1:7684004/1‑68 (MQ=255) gTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAgt > 1:7421180/1‑68 (MQ=255) gTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAgt > 1:5894323/1‑68 (MQ=255) tCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAgtgt < 1:32400256/68‑1 (MQ=255) tCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAgtgt > 1:19404616/1‑68 (MQ=255) tGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTgcg < 1:30683248/68‑1 (MQ=255) tGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTgcg < 1:35516106/68‑1 (MQ=255) tGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTgcg < 1:33659531/68‑1 (MQ=255) tGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTgcg < 1:13801832/68‑1 (MQ=255) tCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGATGTGTgcg > 1:8647987/1‑66 (MQ=255) tCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTgcg > 1:37687246/1‑66 (MQ=255) tCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTgcg > 1:27037991/1‑66 (MQ=255) aTTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTg < 1:1786670/68‑1 (MQ=255) aTTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTg < 1:11372084/68‑1 (MQ=255) agagCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCa > 1:14418018/1‑67 (MQ=255) agagCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCa > 1:25656162/1‑67 (MQ=255) agagCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCa > 1:14752081/1‑67 (MQ=255) agagCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCa > 1:38076096/1‑67 (MQ=255) agagCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCa > 1:18166697/1‑67 (MQ=255) agagCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCa > 1:32970409/1‑67 (MQ=255) agCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCaa > 1:7278305/1‑66 (MQ=255) agCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCaa > 1:16483289/1‑66 (MQ=255) agCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCaa > 1:36854701/1‑66 (MQ=255) gAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCt < 1:13196536/66‑1 (MQ=255) gAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCt < 1:21092815/66‑1 (MQ=255) | ACGCCGCCAGGTCGCGCGCCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTG > CP009273/3015931‑3016063 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |