| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 3202855 = | NA (NA) | 12 (0.030) | 5/94 | NT | NA | intergenic (+9/+34) | ttdT/tsaD | L‑tartrate/succinate antiporte/tRNA(ANN) t(6)A37 threonylcarbamoyladenosine modification protein; glycation binding protein |
| ? | CP009273 | 3202881 = | NA (NA) | intergenic (+35/+8) | ttdT/tsaD | L‑tartrate/succinate antiporte/tRNA(ANN) t(6)A37 threonylcarbamoyladenosine modification protein; glycation binding protein | |||||
Only 100 of 153 total aligned reads displayed.
GTGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTTCCGGCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/3202930‑3202855‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tccggcaccCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCACGCTAACGCCGAGATCC > CP009273/3202881‑3202946 gtcCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCGGCGTAAAACTATTGGGTGCCGTTGAGCAATTT < 1:20752905/65‑1GTGCTTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTT < 1:5543329/68‑1GTGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAATACTATTGGGTGCCGGAGAGCAATTT < 1:26573069/68‑1GTGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCCATTT < 1:28330401/68‑1GTGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTT < 1:29825408/68‑1GTGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTT < 1:19392516/68‑1GTGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTT < 1:19773302/68‑1GTGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTT < 1:21503801/68‑1GTGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTT < 1:22125147/68‑1GTGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTT < 1:22950412/68‑1GTGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTT < 1:26296206/68‑1GTGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTT < 1:28101120/68‑1GTGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTT < 1:9421824/68‑1GTGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTT < 1:30373182/68‑1GTGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTT < 1:31066051/68‑1GTGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTT < 1:32864262/68‑1GTGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTT < 1:36075178/68‑1GTGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTT < 1:3767479/68‑1GTGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTT < 1:37843945/68‑1GTGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTT < 1:5121627/68‑1GTGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTT < 1:5373648/68‑1GTGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTT < 1:6854316/68‑1GTGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTT < 1:17709003/68‑1GTGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTT < 1:1229447/68‑1GTGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTT < 1:14533833/68‑1GTGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTT < 1:16000896/68‑1GTGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTT < 1:14538159/68‑1GTGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTT < 1:14664000/68‑1GTGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTT < 1:10221829/68‑1GTGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTT < 1:11771573/68‑1GTGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTT < 1:10647546/68‑1GTGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCCGCGTAAAACTATTGGGTGCCGGAGAGCAATTT < 1:26894026/68‑1GTGCGTCCGCGCTGGCCGCAGGCGGAGTTACCGGCTGCGTAAAACTATTGGGGGCCGGAGAGCAATTT < 1:1311404/68‑1GTGCGCCGGCGCTGGCGGCTGGGGGAGTTACCGGCGGCGTAAAACTATTGGGTGCCGGAGAGCAATTT < 1:31322859/68‑1 TGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTT > 1:32530155/1‑67 TGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTT > 1:30139716/1‑67 TGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTT > 1:14208800/1‑67 TGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTT > 1:3999108/1‑67 CGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTTCCG > 1:23498001/1‑68 CGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTTCCG > 1:7829787/1‑68 CGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTTCCG > 1:29820402/1‑68 CGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTTCCG > 1:29147616/1‑68 CGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCGGCGTAAAACTATTTGGTGCCGGAGAGAAATTTCCG > 1:3620961/1‑68 GTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTTCCG > 1:24385308/1‑67 GTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTTCCG > 1:33190284/1‑67 TCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTTCCGGC > 1:8615065/1‑68 TCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTTCCGGC > 1:26991129/1‑68 TCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTTCCGG > 1:19094023/1‑67 CCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTTCCGGC < 1:1246303/67‑1 CCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTTCCGGC < 1:28723955/67‑1 CCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTTCCGGC < 1:37681788/67‑1 CGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTTCCGGCAC < 1:34643681/68‑1 CGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTTCCGGCAC < 1:10018646/68‑1 CGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTTCCGGCA > 1:12024145/1‑67 GCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTTCCGGCACC < 1:37065258/68‑1 GCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTTCCGGCACC < 1:39465811/68‑1 GCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTTCCGGCACCCA < 1:21251521/68‑1 GCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTTCCGGCACCCA < 1:3833774/68‑1 GCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTTCCGGCACCCA < 1:23555774/68‑1 CGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTTCCGGCACCCAATAGT < 1:5566389/67‑1 CGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTTCCGGCACCCAATAGT < 1:20837314/67‑1 CGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTTCCGGCACCCAATAGT < 1:19971554/67‑1 CGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTTCCGGCACCCAATAGT < 1:14892748/67‑1 GTTACCGGCTGCGTAAAACTATTGGGGGCCGGAGAGCAATTTCCGGCACCCAATAGTTTTACGCAGC < 1:18866862/67‑1 GTTACCGGCTGCGAAAACCTATTGGGGGCCGGCTAGCAATTGCCGGCACCCAATAGTTTTACGCAGC < 1:15545371/67‑1 GGTGCCGGAGAGCAATTTCCGGCCCCCAATAGTTTTACGCAGCCGGGCACTCCGCCCGCGGCCCGCGC > 1:22315756/1‑68 TCCGGCACCCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCACGCTAACGCC < 1:1936481/68‑1 TCCGGCACCCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCACGCTAACGCC < 1:15206600/68‑1 CCGGCACCCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCACGCTAACGCCG > 1:7911903/1‑68 CCGGCACCCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCACGCTAACGCCG > 1:2949085/1‑68 CCGGCACCCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCACGCTAACGCCG > 1:3649210/1‑68 CGGCACCCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCACGCTAACGCCGA < 1:24239968/68‑1 CGGCACCCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCACGCTAACGCCGA < 1:25404218/68‑1 CGGCACCCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCACGCTAACGCCGA < 1:36883789/68‑1 CGGCACCCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCACGCTAACGCCGA < 1:3005716/68‑1 GGCACCCTATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCACGCTAACGCCGcg > 1:35719708/1‑66 GGCACCCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCACGCTAACGCCGAG > 1:25388778/1‑68 GGCACCCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCACGCTAACGCCGAG > 1:7218300/1‑68 GCACCCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCACGCTAACGCCGAGA > 1:31274209/1‑68 ACCCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCCGCGCGGACGCACGCTAACGCCGAGAT > 1:38027406/1‑67 ACCCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCCGCGCGGACGCACGCTAACGCCGAGAT > 1:37360916/1‑67 ACCCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCACGCTAACGCCGAGAT > 1:2658856/1‑67 ACCCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCACGCTAACGCCGAGAT > 1:26202809/1‑67 ACCCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCACGCTAACGCCGAGAT > 1:32938805/1‑67 ACCCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCACGCTAACGCCGAGAT > 1:10670698/1‑67 ACCCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCACGCTAACGCCGAGAT > 1:23043319/1‑67 ACCCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCACGCTAACGCCGAGAT > 1:2226163/1‑67 ACCCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCACGCTAACGCCGAGAT > 1:27944282/1‑67 ACCCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCACGCTAACGCCGAGAT > 1:29044283/1‑67 ACCCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCACGCTAACGCCGAGAT > 1:29154173/1‑67 ACCCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCACGCTAACGCCGAGAT > 1:29403109/1‑67 ACCCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCACGCTAACGCCGAGAT > 1:35786721/1‑67 ACCCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCACGCTAACGCCGAGAT > 1:3507629/1‑67 ACCCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCACGCTAACGCCGAGAT > 1:34104035/1‑67 ACCCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCACGCTAACGCCGAGAT > 1:33377369/1‑67 ACCCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCACGCTAACGCCGAGAT > 1:32036642/1‑67 ACCCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCACGCTAACGCCGAGAT > 1:13089378/1‑67 CCCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCACGCTAACGCCGAGATCC < 1:13926769/68‑1 CCCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCACGCTAACGCCGAGATCC < 1:8651646/68‑1 CCCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCACGCTAACGCCGAGATCC < 1:17469704/68‑1 GTGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAAAACTATTGGGTGCCGGAGAGCAATTTCCGGCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/3202930‑3202855‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tccggcaccCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCACGCTAACGCCGAGATCC > CP009273/3202881‑3202946 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |