| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 3202855 = | NA (NA) | 12 (0.030) | 5/94 | NT | NA | intergenic (+9/+34) | ttdT/tsaD | L‑tartrate/succinate antiporte/tRNA(ANN) t(6)A37 threonylcarbamoyladenosine modification protein; glycation binding protein |
| ? | CP009273 | 3202881 = | NA (NA) | intergenic (+35/+8) | ttdT/tsaD | L‑tartrate/succinate antiporte/tRNA(ANN) t(6)A37 threonylcarbamoyladenosine modification protein; glycation binding protein | |||||
Only 100 of 829 total aligned reads displayed.
GGCTTACTGTGGATGCCCGTGGTGTTGCTTTAAGTGAGGACGGTGCCGGAAATTGCTCTCCGGCACCCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCACGCTAACGCCGAGATCCGC > CP009273/3202814‑3202948 | gCTTACTGTGGATGCCCGTGGTGTTGCTTTAAGTGAGGACGGTGCCGGAAATTGCTCTCCGGCACCCa > 1:3772241/1‑68 (MQ=255) cTTACTGTGGATGCCCGTGGTGTTGCTTTAAGTGAGGACGGTGCCGGAAATTGCTCTCCGGCACCCa < 1:26294731/67‑1 (MQ=255) cTTACTGTGGATGCCCGTGGTGTTGCTTTAAGTGAGGACGGTGCCGGAAATTGCTCTCCGGCACCCa < 1:27988169/67‑1 (MQ=255) cTTACTGTGGATGCCCGTGGTGTTGCTTTAAGTGAGGACGGTGCCGGAAATTGCTCTCCGGCACCCa < 1:33007196/67‑1 (MQ=255) cTTACTGTGGATGCCCGTGGTGTTGCTTTAAGTGAGGACGGTGCCGGAAATAGCTCTCCGGCACCCa < 1:15854656/67‑1 (MQ=255) tACTGTGGATGCCCGTGGTGTTGCTTTAAGTGAGGACGGTGCCGGAAATTGCTCTCCGGCACCCAATa > 1:10362372/1‑68 (MQ=255) tACTGTGGATGCCCGTGGTGTTGCTTTAAGTGAGGACGGTGCCGGAAATTGCTCTCCGGCACCCAATa > 1:17661691/1‑68 (MQ=255) aCTGTGGATGCCCGTGGTGTTGCTTTAAGTGAGGACGGTGCCGGAAATTGCTCTCCGGCACCCAATAg > 1:16677530/1‑68 (MQ=255) aCTGTGGATGCCCGTGGTGTTGCTTTAAGTGAGGACGGTGCCGGAAATTGCTCTCCGGCACCCAATAg > 1:4088554/1‑68 (MQ=255) ccgctggcggagttaccggctgcgtaaaactattgggtgccggagagcaatttccggcaccCAATAg < 1:35931072‑M2/6‑1 (MQ=255) cTGTGGATGCCCGTGGTGTTGCTTTAAGTGAGGACGGTGCCGGAAATTGCTCTCCGGCACCCAATAGt < 1:33741160/68‑1 (MQ=255) cTGTGGATGCCCGTGGTGTTGCTTTAAGTGAGGACGGTGCCGGAAATTGCTCTCCGGCACCCAATAGt < 1:24215314/68‑1 (MQ=255) cTGTGGATGCCCGTGGTGTTGCTTTAAGTGAGGACGGTGCCGGAAATTGCTCTCCGGCACCCAATAGt < 1:38288917/68‑1 (MQ=255) tgtgGATGCCCGTGGTGTTGCTTTAAGTGAGGACGGTGCCGGAAATTGCTCTCCGGCACCCAATAGtt > 1:12051294/1‑68 (MQ=255) cgctggcggagttaccggctgcgtaaaactattgggtgccggagagcaatttccggcaccCAATAGt < 1:29863271‑M2/7‑1 (MQ=255) ggATGCCCGTGGTGTTGCTTTAAGTGAGGACGGTGCCGGAAATTGCTCTCCGGCACCCAATAGtttt > 1:10931504/1‑67 (MQ=255) tGCCCGTGGTGTTGCTTTAAGTGAGGACGGTGCCGGAAATTGCTCTCCGGCACCCAATAGTTTTACGc > 1:23786183/1‑68 (MQ=255) tGCCCGTGGTGTTGCTTTAAGTGAGGACGGTGCCGGAAATTGCTCTCCGGCACCCAATAGTTTTACGc > 1:25442897/1‑68 (MQ=255) tGCCCGTGGTGTTGCTTTAAGTGAGGACGGTGCCGGAAATTGCTCTCCGGCACCCAATAGTTTTACGc > 1:25929798/1‑68 (MQ=255) tGCCCGTGGTGTTGCTTTAAGTGAGGACGGTGCCGGAAATTGCTCTCCGGCACCCAATAGTTTTACGc > 1:29337547/1‑68 (MQ=255) cccGTGGTGTTGCTTTAAGTGAGGACGGTGCCGGAAATTGCTCTCCGGCACCCAATAGTTTTACGCa > 1:37577006/1‑67 (MQ=255) cccGTGGTGTTGCTTTAAGTGAGGACGGTGCCGGAAATTGCTCTCCGGCACCCAATAGTTTTACGCa > 1:28653949/1‑67 (MQ=255) cccGTGGTGTTGCTTTAAGTGAGGACGGTGCCGGAAATTGCTCTCCGGCACCCAATAGTTTTACGCa > 1:33269310/1‑67 (MQ=255) cccGTGGTGTTGCTTTAAGTGAGGACGGTGCCGGAAATTGCTCTCCGGCACCCAATAGTTTTACGCa > 1:3722408/1‑67 (MQ=255) cccGTGGTGTTGCTTTAAGTGAGGACGGTGCCGGAAATTGCTCTCCGGCACCCAATAGTTTTACGCa > 1:14912735/1‑67 (MQ=255) ccGTGGTGTTGCTTTAAGTGAGGACGGTGCCGGAAATTGCTCTCCGGCACCCAATAGTTTTACGCAg < 1:8526059/67‑1 (MQ=255) ccGTGGTGTTGCTTTAAGTGAGGACGGTGCCGGAAATTGCTCTCCGGCACCCAATAGTTTTACGCAGc < 1:5279096/68‑1 (MQ=255) ccGTGGTGTTGCTTTAAGTGAGGACGGTGCCGGAAATTGCTCTCCGGCACCCAATAGTTTTACGCAGc < 1:20006174/68‑1 (MQ=255) ccGTGGTGTTGCTTTAAGTGAGGACGGTGCCGGAAATTGCTCTCCGGCACCCAATAGTTTTACGCAGc < 1:7065346/68‑1 (MQ=255) ccGTGGTGTTGCTTTAAGTGAGGACGGTGCCGGAAATTGCTCTCCGGCACCCAATAGTTTTACGCAGc < 1:22167816/68‑1 (MQ=255) ccGGGGTGTTGCTTTAAGTGAGGACTGTGCCGGAAATTGCTCTCCGGCACCCAATAGTTTTACGCAGc < 1:4372085/68‑1 (MQ=255) acGTGGTGTTGCTTTAAGTGAGGACGGTGCCGGAAATTGATATCCGGCACCCAATAGTTTTACGCAGc < 1:15409335/67‑1 (MQ=255) gtggtgTTGCTTTAAGTGAGGACGGGGCCGGAAATTGCTCTCCGGCACCCAATAGTTTTACGCAGCCg < 1:7576857/68‑1 (MQ=255) ggtgTTGCTTTAAGTGAGGACGGTGCCGGAAATTGCTCTCCGGCACCCAATAGTTTTACGCAGCCGGt > 1:34613844/1‑68 (MQ=255) ggtgTTGCTTTAAGTGAGGACGGTGCCGGAAATTGCTCTCCGGCACCCAATAGTTTTACGCAGCCGGt > 1:10638121/1‑68 (MQ=255) tgtTGCTTTAAGTGAGGACGGTGCCGGAAATTGCTCTCCGGCACCCAATAGTTTTACGCAGCCGGTa > 1:312894/1‑67 (MQ=255) tgtTGCTTTAAGTGAGGACGGTGCCGGAAATTGCTCTCCGGCACCCAATAGTTTTACGCAGCCGGTa > 1:9402668/1‑67 (MQ=255) gtTGCTTTAAGTGAGGACGGTGCCGGAAATTGCTCTCCGGCACCCAATAGTTTTACGCAGCCGGTa > 1:18251159/1‑66 (MQ=255) tGCTTTAAGTGAGGACGGTGCCGGAAATTGCTCTCCGGCACCCAATAGTTTTACGCAGCCGGTAACt < 1:13376691/67‑1 (MQ=255) cTTTAAGTGAGGACGGTGCCGGAAATTGCTCTCCGGCACCCAATAGTTTTACGCAGc < 1:30907197/57‑1 (MQ=255) tttAAGTGAGGCCGGTGCCGGAAATTGCTCTCCGGCACCCAATAGTTTTACGCAGCCGGTTACTCCg > 1:12745045/1‑67 (MQ=255) tttAAGTGAGGACGGTGCCGGAAATTGCTCTCCGGCACCCAATAGTTTTACGCAGCCGGTAACTCCg < 1:36895682/67‑1 (MQ=255) tttAAGTGAGGACGGTGCCGGAAATTGCTCTCCGGCACCCAATAGTTTTACGCAGCCGGTAACTCCg > 1:17890141/1‑67 (MQ=255) tttAAGTGAGGACGGTGCCGGAAATTGCTCTCCGGCACCCAATAGTTTTACGCAGCCGGTAACTCCg > 1:5695117/1‑67 (MQ=255) tttAAGTGAGGACGGTGCCGGAAATTGCTCTCCGGCACCCAATAGTTTTACGCAGCCGGTAACTCCg > 1:22545420/1‑67 (MQ=255) tttAAGTGAGGACGGTGCCGGAAATTGCTCTCCGGCACCCAATAGTTTTACGCAGCCGGTAACTCCg > 1:21002531/1‑67 (MQ=255) ttAAGTGAGGACGGTGCCGGAAATTGCTCTCCGGCACCCAATAGTTTTACGCAGCCGGTAACTCCgcc < 1:23358811/68‑1 (MQ=255) gTGAGGACGGTGCCGGAAATTGCTCTCCGGCACCCAATAGTTTTACGCAGCCGGTAACTCCgccagcg > 1:17312546/1‑68 (MQ=255) gTGAGGACGGTGCCGGAAATTGCTCTCCGGCACCCAATAGTTTTACGCAGCCGGTAACTCCgccagcg > 1:1186852/1‑68 (MQ=255) gTGAGGACGGTGCCGGAAATTGCTCTCCGGCACCCAATAGTTTTACGCAGCCGGTAACTCCgccagc > 1:35573034/1‑67 (MQ=255) tGAGGACGGTGCCGGAAATTGCTCTCCGGCACCCAATAGTTTTACGCAGCCGGTAACTCCgccagcg > 1:14717/1‑67 (MQ=255) gACGGTGCCGGAAATTGCTCTCCGGCACCCAATAGTTTTACGCAGCCGGTAACTCCgccagcggcca > 1:20234496/1‑67 (MQ=255) gACGGTGCCGGAAATTGCTCTCCGGCACCCAATAGTTTTACGCAGCCGGTAACTCCgccagcggcca > 1:19030341/1‑67 (MQ=255) aCGGTGCCGGAAATTGCTCTCCGGCACCCAATAGTTTTACGCAGCCGGTAACTCCgccagcggccagc > 1:13935073/1‑68 (MQ=255) aCGGTGCCGGAAATTGCTCTCCGGCACCCAATAGTTTTACGCAGCCGGTAACTCCgccagcggccagc > 1:9736679/1‑68 (MQ=255) aCGGTGCCGGAAATTGCTCTCCGGCACCCAATAGTTTTACGCAGCCGGTAACTCCgccagcggccagc > 1:36326791/1‑68 (MQ=255) aCGGTGCCGGAAATTGCTCTCCGGCACCCAATAGTTTTACGCAGCCGGTAACTCCgccagcggccagc > 1:11619819/1‑68 (MQ=255) aCGGTGCCGGAAATTGCTCTCCGGCACCCAATAGTTTTACGCAGCCGGTAACTCCgccagcggccagc > 1:37874109/1‑68 (MQ=255) aCGGTGCCGGAAATTGCTCTCCGGCACCCAATAGTTTTACGCAGCCGGTAACTCCgccagcggccagc > 1:3938097/1‑68 (MQ=255) aCGGTGCCGGAAATTGCTCTCCGGCACCCAATAGTTTTACGCAGCCGGTAACTCCgccagcggccagc > 1:5528987/1‑68 (MQ=255) aCGGTGCCGGAAATTGCTCTCCGGCACCCAATAGTTTTACGCAGCCGGTAACTCCgccagcggccagc > 1:613293/1‑68 (MQ=255) aCGGTGCCGGAAATTGCTCTCCGGCACCCAATAGTTTTACGCAGCCGGTAACTCCgccagcggccagc > 1:6611846/1‑68 (MQ=255) aCGGTGCCGGAAATTGCTCTCCGGCACCCAATAGTTTTACGCAGCCGGTAACTCCgccagcggccagc > 1:18674514/1‑68 (MQ=255) aCGGTGCCGGAAATTGCTCTCCGGCACCCAATAGTTTTACGCAGCCGGTAACTCCgccagcggccagc > 1:19616535/1‑68 (MQ=255) aCGGTGCCGGAAATTGCTCTCCGGCACCCAATAGTTTTACGCAGCCGGTAACTCCgccagcggccagc > 1:31644169/1‑68 (MQ=255) aCGGTGCCGGAAATTGCTCTCCGGCACCCAATAGTTTTACGCAGCCGGTAACTCCgccagcggccagc > 1:16153907/1‑68 (MQ=255) aCGGTGCCGGAAATTGCTCTCCGGCACCCAATAGTTTTACGCAGCCGGTAACTCCgccagcggccagc > 1:30582314/1‑68 (MQ=255) cGGTGCCGGAAATTGCTCTCCGGCACCCAATAGTTTTACGCAGCCGGTAACTCCgccagcggccagc < 1:19226505/67‑1 (MQ=255) cGGTGCCGGAAATTGCTCTCCGGCACCCAATAGTTTTACGCAGCCGGTAACTCCgccagcggccagc < 1:14292599/67‑1 (MQ=255) cGGTGCCGGAAATTGCTCTCCGGCACCCAATAGTTTTACGCAGCCGGTAACTCCgccagcggccagc < 1:38671678/67‑1 (MQ=255) GTGCCGGAAATTGCTCTCCGGCACCCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGcgcg < 1:10018646‑M1/68‑1 (MQ=255) CGGAAATTGCTCTCCGGCACCCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGAc > 1:24385308‑M1/1‑67 (MQ=255) AAATTGCTCTCCGGCACCCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCAc < 1:39156075‑M1/68‑1 (MQ=255) AAATTGCTCTCCGGCACCCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCAc < 1:21503801‑M1/68‑1 (MQ=255) AAATTGCTCTCCGGCACCCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCAc < 1:6854316‑M1/68‑1 (MQ=255) AAATTGCTCTCCGGCACCCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCAc < 1:26829408‑M1/68‑1 (MQ=255) AAATTGCTCTCCGGCACCCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCAc < 1:32864262‑M1/68‑1 (MQ=255) AAATTGCTCTCCGGCACCCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCAc < 1:29675235‑M1/68‑1 (MQ=255) AAATTGCTCTCCGGCACCCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCAc < 1:29126085‑M1/68‑1 (MQ=255) AAATTGCTCTCCGGCACCCAATAGTATTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCAc < 1:26573069‑M1/68‑1 (MQ=255) AAATTGCTCAACGGCACCCAATAGTTTTACGCCGCCGGTAACTCCGCCAGCGGCCAGCGCGgacggac < 1:20752905‑M1/68‑4 (MQ=255) aaTTGCTCTCCGGCACCCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGacgcacg < 1:32471829/68‑1 (MQ=255) aaTTGCTCTCCGGCACCCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGacgcacg < 1:8875296/68‑1 (MQ=255) aaTTGCTCTCCGGCACCCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGacgcacg < 1:21824956/68‑1 (MQ=255) aaTTGCTCTCCGGCACCCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGacgcacg < 1:24869291/68‑1 (MQ=255) aaTTGCTCTCCGGCACCCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGacgcacg < 1:3519606/68‑1 (MQ=255) aaTTGCTCTCCGGCACCCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGacgcacg < 1:12319937/68‑1 (MQ=255) ttGCTCTCCGGCACCCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCACGCt < 1:4954663/68‑1 (MQ=255) ttGCTCTCCGGCACCCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCACGCt < 1:27479181/68‑1 (MQ=255) gCTCTCCGGCACCCAATAGTTTTACGCAGCCGGTAACTACGCCAGCGGCCAGCGCGGACGCACGCTaa < 1:32016466/68‑1 (MQ=255) tctcCGGCACCCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCACGCTAAc > 1:3487544/1‑67 (MQ=255) tctcCGGCACCCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCACGCTAACg < 1:2292453/68‑1 (MQ=255) tctcCGGCACCCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCACGCTAACg < 1:11195966/68‑1 (MQ=255) ccggcaccCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCACGCTAACGCCg > 1:7911903‑M2/9‑68 (MQ=255) cggcaccCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCACGCTAACGCCga < 1:3005716‑M2/61‑1 (MQ=255) ggcaccCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCACGCTAACGCCgag > 1:7218300‑M2/7‑68 (MQ=255) accCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCACGCTAACGCCGAGAt > 1:30248479‑M2/4‑67 (MQ=255) accCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCACGCTAACGCCGAGAt > 1:34104035‑M2/4‑67 (MQ=255) accCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCACGCTAACGCCGAGAt > 1:28258566‑M2/4‑67 (MQ=255) accCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCACGCTAACGCCGAGAt > 1:13089378‑M2/4‑67 (MQ=255) | GGCTTACTGTGGATGCCCGTGGTGTTGCTTTAAGTGAGGACGGTGCCGGAAATTGCTCTCCGGCACCCAATAGTTTTACGCAGCCGGTAACTCCGCCAGCGGCCAGCGCGGACGCACGCTAACGCCGAGATCCGC > CP009273/3202814‑3202948 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |