New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP009273 = 3263325NA (NA)111 (0.320)
+TTCGGCGGGTTTTTA		 7/82 NT 27.6% intergenic (+364/+250) yhaC/rnpB pentapetide repeats‑related protein/RNase P, M1 RNA component
?CP009273 = 3263427 397 (0.840)intergenic (+466/+148) yhaC/rnpB pentapetide repeats‑related protein/RNase P, M1 RNA component

Only 100 of 164 total aligned reads displayed.

GTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP009273/3263277‑3263325
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGG  <  CP009273/3263427‑3263361
                                                 |||||||||||||||                                                                   
GTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCTTCGGCGGGTTTTTACTTT                                                                 <  1:14065298/68‑1
                     TTCTGCCCCTCCAAAAGTAAAAACCCGCTTCGGCGGGTTTTTACTTTTGGAGGGGCAGAAAGATGAAT                                            >  1:5841477/1‑68
                         GCCCCTCCAAAAGTAAAAACCCGCTTCGGCGGGTTTTTACTTTTGGAGGGGCAGAAAGATGAATG                                           >  1:33770250/1‑65
                           CCCTCCAAAAGCAAAAACCCGCTTCGGCGGGTTTTTGCTTTTGGAGGGGCAGAAAGATGAATG                                           >  1:16961192/1‑63
                                  tagGTAAAACCCCGCTTCGGCGGGTTTTTTGTTTTGGAGGGGCAGAAAGATGAATTACTGTCCACGAC                               <  1:38699808/65‑1
                                   actTAAAAAGCCGCTTCGGCTGGTTTTTACTTTTGGTGGGGCAGAAAGATGAATGACTGTCCACGACA                              <  1:12374455/65‑1
                                    ctTAAAAACCCGCTTCGGCGGGTTTTTTCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACAC                             <  1:32340720/66‑1
                                    cgaAAAAACCCGCTTCGGCGGGTTTTTACTTTTGTAGGGGCATAAAGATGAATGACTGTCCACGACAC                             <  1:14894030/65‑1
                                    atTAAAAACCCCCTGCGGCGGGTTTTTTCTTTTGTTGGGGCACAAAGATGAATGACTGTCCACGACAC                             <  1:21398997/66‑1
                                    AGTAAAAACCCGCTTCGGCGGGTTTTTACTTTTGGAGGGGCAGAAAGATGAATGACTGTCCCCGAC                               >  1:26677127/1‑66
                                    AGTAAAAACCCGCTTCGGCGGGTTTTTACTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGAC                               >  1:27933409/1‑66
                                    AGTAAAAACCCGCTTCGGCGGGTTTTTACTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGAC                               >  1:822338/1‑66
                                     GTAAAAACCCGCTTCGGCGGGTTTTTACTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGCCACT                            >  1:708286/1‑68
                                     GTAAAAACCCGCTTCGGCGGGTTTTTACTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACT                            >  1:623163/1‑68
                                     GTAAAAACCCGCTTCGGCGGGTTTTTACTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACT                            >  1:25277647/1‑68
                                     GTAAAAACCCGCTTCGGCGGGTTTTTACTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACT                            >  1:2174645/1‑68
                                     GTAAAAACCCGCTTCGGCGGGTTTTTACTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACT                            >  1:21931063/1‑68
                                     GTAAAAACCCGCTTCGGCGGGTTTTTACTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACT                            >  1:22627159/1‑68
                                     GTAAAAACCCGCTTCGGCGGGTTTTTACTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACT                            >  1:23189642/1‑68
                                     GTAAAAACCCGCTTCGGCGGGTTTTTACTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACT                            >  1:8657764/1‑68
                                     GTAAAAACCCGCTTCGGCGGGTTTTTACTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACT                            >  1:26407191/1‑68
                                     GTAAAAACCCGCTTCGGCGGGTTTTTACTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACT                            >  1:29091743/1‑68
                                     GTAAAAACCCGCTTCGGCGGGTTTTTACTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACT                            >  1:29224110/1‑68
                                     GTAAAAACCCGCTTCGGCGGGTTTTTACTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACT                            >  1:29686487/1‑68
                                     GTAAAAACCCGCTTCGGCGGGTTTTTACTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACT                            >  1:31872900/1‑68
                                     GTAAAAACCCGCTTCGGCGGGTTTTTACTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACT                            >  1:5786300/1‑68
                                     GTAAAAACCCGCTTCGGCGGGTTTTTACTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACT                            >  1:6318518/1‑68
                                     GTAAAAACCCGCTTCGGCGGGTTTTTACTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACT                            >  1:32524915/1‑68
                                     GTAAAAACCCGCTTCGGCGGGTTTTTACTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACT                            >  1:4644750/1‑68
                                     GTAAAAACCCGCTTCGGCGGGTTTTTACTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACT                            >  1:33171457/1‑68
                                     GTAAAAACCCGCTTCGGCGGGTTTTTACTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACT                            >  1:39008304/1‑68
                                     GTAAAAACCCGCTTCGGCGGGTTTTTACTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACT                            >  1:34907354/1‑68
                                     GTAAAAACCCGCTTCGGCGGGTTTTTACTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACT                            >  1:36720428/1‑68
                                     GTAAAAACCCGCTTCGGCGGGTTTTTACTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACT                            <  1:10059591/68‑1
                                     GTAAAAACCCGCTTCGGCGGGTTTTTACTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACT                            >  1:17309009/1‑68
                                     GTAAAAACCCGCTTCGGCGGGTTTTTACTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACT                            <  1:17362438/68‑1
                                     GTAAAAACCCGCTTCGGCGGGTTTTTACTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACT                            >  1:8795411/1‑68
                                     GTAAAAACCCGCTTCGGCGGGTTTTTACTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACT                            >  1:14741908/1‑68
                                     GTAAAAACCCGCTTCGGCGGGTTTTTACTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACT                            >  1:18511365/1‑68
                                     GTAAAAACCCGCTTCGGCGGGTTTTTACTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACT                            >  1:9461228/1‑68
                                     GTAAAAACCCGCTTCGGCGGGTTTTTACTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACT                            >  1:19209030/1‑68
                                     GTAAAAACCCGCTTCGGCGGGTTTTTACTTTTGGAGGGGCAGAAAGATGAATGACCGTCCACGCCACT                            >  1:4057104/1‑68
                                       AAACACCCGCTTCGGGGGGTTTTTTCTTTTGTAGGGTCACAAAGATGAATGACTGTCCACGACACTAT                          <  1:30714347/68‑1
                                       AAAACCCCGCTTCGGGGTGTTTTTTCTTTTGGTGGGGCAGAAAGATGAATGACTGTCCACGACACTAT                          <  1:18569211/68‑1
                                       AAAACCCCGCTTCGGCGGGTTTTTTCTTTTGTAGGGGCAGAAAGATGAATGACTGTCCACGACACTAT                          <  1:22772076/68‑1
                                       AAAACCCCGCTTCGGCGGGTTTTTTCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTAT                          <  1:26379465/68‑1
                                       AAAACCCCGCTTCGGCGGGTTTTTACTTTTGTTGGGGCAGAAAGATTAATGACTGTCCACGACACTAT                          <  1:1377344/68‑1
                                       AAAAACCCGCTTCGGCGGGTTTTTACTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTAT                          <  1:2386816/68‑1
                                       AAAAACCCGCTTCGGCGGGTTTTTACTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTAT                          <  1:119587/68‑1
                                       AAAAACCCGCTTCGGCGGGTTTTTACTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTAT                          <  1:13567583/68‑1
                                       AAAAACCCGCTTCGGCGGGTTTTTACTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTAT                          <  1:17841538/68‑1
                                         acACCCGCTGCGGCGGGTTTTTTCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATAC                        <  1:39242095/66‑1
                                         aacCCCGCTTCGGCGGGTTTTTTCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATAC                        <  1:731298/65‑1
                                         aacCCCGCTTCGGCGGGTTTTTACTTTTGGTGGGGCAGAAAGATTAATGACTGTCCACGACACTATAC                        <  1:5720074/65‑1
                                         aacCCCGCTGCGGCGGGTTTTTTCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATAC                        <  1:15844877/65‑1
                                         AAACCCGCTTGGGCGGGTTTTTATTTTTGGAGGGGCAGAAAGATGAATGTCTGTCCACGACACTATAC                        <  1:32510397/68‑1
                                         AAACCCGCTTCGGCGGGTTTTTTCTTTTGTAGGGGCAGAAAGATGAATGACTGTCCACGACACTATAC                        <  1:11358490/68‑1
                                         AAACCCGCTTCGGCGGGTTTTTTCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATAC                        <  1:33224924/68‑1
                                         AAACCCGCTTCGGCGGGTTTTTTCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATAC                        <  1:9723702/68‑1
                                         AAACCCGCTTCGGCGGGTTTTTTCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATAC                        <  1:28084946/68‑1
                                         AAACCCGCTTCGGCGGGTTTTTTCTTTTGGAGGGGCACAAAGATGAATGACTGTCCACGACACTATAC                        <  1:13263113/68‑1
                                         AAACCCGCTTCGGCGGGTTTTTACTTTTGTATGGGCAGAACGATGAATGACTGTCCACGACACTATAC                        <  1:5654668/68‑1
                                         AAACCCGCTTCGGCGGGTTTTTACTTTTGTAGGGGCAGAAAGATGAATGACTGTCCACGACACTATAC                        <  1:30588779/68‑1
                                         AAACCCGCTTCGGCGGGTTTTTACTTTTGGCGGGGCTGAAAGATGAATGACTGTCCACGACACTATAC                        <  1:27813255/68‑1
                                         AAACCCGCTTCGGCGGGTTTTTACTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATAC                        <  1:36376584/68‑1
                                         AAACCCGCTTCGGCGGGTTTTTACTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATAC                        <  1:34639063/68‑1
                                          AACCCGCTTCGGCGGGTTTTTTCTTTTGTAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACC                       <  1:36374581/68‑1
                                          AACCCGCTTCGGCGGGTTTTTACTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACC                       <  1:4262498/68‑1
                                          AACCCGCTTCGGCGGGTTTTTACTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATAC                        >  1:22100402/1‑67
                                           ACCCGCTTCGGCGGGTTTTTACTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCC                      >  1:973607/1‑68
                                           ACCCGCTTCGGCGGGTTTTTACTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCC                      >  1:12618667/1‑68
                                           ACCCGCTTCGGCGGGTTTTTACTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCC                      >  1:11038066/1‑68
                                           ACCCGCTTCGGCGGGTGTTTACTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCC                      >  1:37955713/1‑68
                                            CCCGCTTCGGCGGGTTTTTACTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCA                     >  1:25995038/1‑68
                                            CCCGCTTCGGCGGGTTTTTACTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCA                     >  1:26982467/1‑68
                                            CCCGCTTCGGCGGGTTTTTACTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCA                     >  1:18820760/1‑68
                                            CCCGCTTCGGCGGGTTTTTACTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCA                     >  1:16491671/1‑68
                                             CCGCTTCGGCGGGTTTTTACTTTTGGAGGGGCAGAATGATTAATGACTGTCCACGACACTATACCCAA                    <  1:14390636/68‑1
                                              CGCTTCGGCGGGTTTTTACTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAA                   <  1:2491040/68‑1
                                                 TTCGGCGGGTTTTTTGTTTTGTAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGA                <  1:17891966/68‑1
                                                 TTCGGCGGGTTTTTTCTTTTGTTGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGA                <  1:13101269/68‑1
                                                 TTCGGCGGGTTTTTACTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGA                >  1:17250673/1‑68
                                                 TTCGGCGGGTTTTTACTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGA                >  1:2838311/1‑68
                                                  TCGGCGGGTTTTTACTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAA               >  1:16091521/1‑68
                                                     GCGGGTTTTTACTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGC            >  1:24439876/1‑68
                                                      CGGGTTTTTTTTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGC            <  1:33000776/67‑1
                                                       GGGTTTTTACTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCG           >  1:20612715/1‑67
                                                         GTTTTTTCTTTTGTATGGGCAGAAATATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGC         <  1:1286052/67‑1
                                                         GTTTTTTCTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGC         <  1:9813666/67‑1
                                                         GTTTTTAGTTTTGTTGGGGCACAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGC         <  1:6940993/67‑1
                                                         GTTTTTACTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCT        >  1:30369250/1‑68
                                                           TTTTTCTTTTGGAGGGGCAGAAAGATTAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTT       <  1:37946542/67‑1
                                                              TACTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCG   >  1:35640996/1‑68
                                                               ACTTTTGGAGGGGCAGAAAGATGATTGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGG  >  1:14029525/1‑68
                                                               ACTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGG  >  1:5273950/1‑68
                                                               ACTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGG  >  1:25511447/1‑68
                                                               ACTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGG  >  1:21257308/1‑68
                                                               ACTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGG  >  1:19091792/1‑68
                                                               ACTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGG  >  1:13400234/1‑68
                                                               ACTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGG  >  1:10273778/1‑68
                                                 |||||||||||||||                                                                   
GTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP009273/3263277‑3263325
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTTTTGGAGGGGCAGAAAGATGAATGACTGTCCACGACACTATACCCAAAAGAAAGCGGCTTATCGG  <  CP009273/3263427‑3263361

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.