| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 3263325 | NA (NA) | 111 (0.320) +TTCGGCGGGTTTTTA |
7/82 | NT | 27.6% | intergenic (+364/+250) | yhaC/rnpB | pentapetide repeats‑related protein/RNase P, M1 RNA component |
| ? | CP009273 | = 3263427 | 397 (0.840) | intergenic (+466/+148) | yhaC/rnpB | pentapetide repeats‑related protein/RNase P, M1 RNA component | |||||
Only 100 of 625 total aligned reads displayed.
CCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTG > CP009273/3263361‑3263494 | ccGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGt > 1:10273778‑M2/1‑67 (MQ=255)ccGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGt > 1:5748282‑M2/1‑67 (MQ=255)ccGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGt > 1:14450330‑M2/1‑67 (MQ=255)ccGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGc < 1:4901800/68‑1 (MQ=31) aaGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCACCAAAAGCaaaa > 1:27125067/1‑67 (MQ=25) aaGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCAACAAAAGCaaaa > 1:4183079/1‑67 (MQ=255) aaGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCACCCCCAACAAAAGCaaaa > 1:37737343/1‑67 (MQ=11) gCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAAc > 1:18573813/1‑67 (MQ=35) gCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCAATCATATTTGTTCCCAAACAAAAGCAAAAAc > 1:27716606/1‑67 (MQ=11) gCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACccgc < 1:14969797/68‑1 (MQ=35) gCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACccg > 1:3128723/1‑67 (MQ=35) ttctttTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGtaaaaacccgccga > 1:16091521‑M2/1‑54 (MQ=255) tctttTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGtaaaaacccgccgaa > 1:2838311‑M2/1‑53 (MQ=255) tttGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAACCAAAAACCCGCCGaatc > 1:8558919/1‑65 (MQ=255) tttGGGTATAGTGTCGTGGACAGTCATTAATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCg > 1:29575460/1‑68 (MQ=25) ttGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCgg < 1:15456738/68‑1 (MQ=35) tGGGTATAGTGCCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCggg < 1:23980039/68‑1 (MQ=25) gggTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGtaaaaacccgccgaagcgggt > 1:39178182‑M2/1‑47 (MQ=255) gggTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGtaaaaacccgccgaagcgggt > 1:11038066‑M2/1‑47 (MQ=255) gggTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGt < 1:30156792/68‑1 (MQ=35) gggTATAGTGTCGTGGACAGGCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGt < 1:13781416/68‑1 (MQ=25) gTATAGTGTCGTGGACAGTCATTCATCTTTGTGCCCCTCCAAAAGaaaaaacccgccgaagcgggttt < 1:13263113‑M2/68‑24 (MQ=255) gTATAGTGTCGTGGACAGTCATTCATCTTTGTGCCCCACCAAAAGCAAAAACCCGCCGAAGCGGGgtt > 1:373131/1‑68 (MQ=11) gTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGCAGCGGGttt > 1:14878677/1‑68 (MQ=25) gTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGttt > 1:12932337/1‑68 (MQ=35) gTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGtt < 1:27971281/67‑1 (MQ=35) gTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGtt < 1:24598806/67‑1 (MQ=35) gTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGgtt > 1:34431595/1‑68 (MQ=25) gTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGgtt > 1:35711269/1‑68 (MQ=25) gTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTACAAAAGtaaaaacccgccgaagcgggttt < 1:30588779‑M2/68‑24 (MQ=255) gTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTACAAAAGaaaaaacccgccgaagcgggttt < 1:11358490‑M2/68‑24 (MQ=255) gTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTACAAAACtaaaaaccccccgaagcggggtt < 1:36839570‑M2/68‑24 (MQ=255) gTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCAACAAAAACAAAAACCCGCCGAAGAGGGttt > 1:26071085/1‑68 (MQ=11) gTATAGTGTCGTGGACAGTCATTCATCTTTCGGCCCCTCCAAAAGCAAAAACCCGCCGCAGCCGGttt > 1:32096566/1‑68 (MQ=11) gTATAGTGTCGTGGACAGTAAAACATCTTTCAGCCCCTCCAAAAGCAAAAACCCCCCGAAGCGGGgtt > 1:21302799/1‑68 (MQ=11) ataGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGtaaaaacccgccgaagcgggttttt < 1:119587‑M2/68‑26 (MQ=255) ataGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGtaaaaacccgccgaagcgggttttt < 1:13567583‑M2/68‑26 (MQ=255) ataGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGtaaaaacccgccgaagcgggttttt < 1:17841538‑M2/68‑26 (MQ=255) ataGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGtaaaaacccgccgaagcgggttttt < 1:2493242‑M2/68‑26 (MQ=255) ataGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGgtttt > 1:65936/1‑68 (MQ=25) ataGTGTCGTGGACAGTCATTCATATTTGTGCCCCACCAAAAGCAAAAACCCGCCGCAGCGGGgtttt > 1:16440282/1‑68 (MQ=11) taGTGTCGGGGACAGGCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTa < 1:38027172/68‑1 (MQ=255) aGTGTCGTGGACAGTCATTCATCTTTGTGCCCCAACAAAATCAAAAACCCCCCGAAGCGGGGATTTAc > 1:18317216/1‑68 (MQ=11) aGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGtaaaaacccgccgaagcgggtttttac < 1:17362438‑M2/68‑28 (MQ=255) aGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGtaaaaacccgccgaagcgggtttttac > 1:26407191‑M2/1‑41 (MQ=255) aGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGtaaaaacccgccgaagcgggtttttac > 1:23519011‑M2/1‑41 (MQ=255) aGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGtaaaaacccgccgaagcgggtttttac > 1:36463667‑M2/1‑41 (MQ=255) aGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTAc < 1:1931841/68‑1 (MQ=35) aGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTAc < 1:2885231/68‑1 (MQ=35) aGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTAc < 1:25716630/68‑1 (MQ=35) aGTGTCGTGGACAGTCATTCATCTTTCTGCCCCAACAAAAGCAAAAACCCGCCGCAGCGGGTTTTTAc > 1:32971780/1‑68 (MQ=11) aGTGGCGTGGACGGTCATTCATCTTTCTGCCCCTCCAAAAGtaaaaacccgccgaagcgggtttttac > 1:4057104‑M2/1‑41 (MQ=255) gtgtCGTGGACAGTCATTCATCTTTGTGCCCCAACAAAAGCAAAAACCCCCCGCAGCGGGTTTTTACg > 1:22988510/1‑68 (MQ=11) gtgtCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACg > 1:39501282/1‑68 (MQ=33) gtgtCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACg > 1:10586362/1‑68 (MQ=33) gtgtCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACg > 1:309119/1‑68 (MQ=33) tgtCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCCCGTTTTTACGt > 1:4508669/1‑68 (MQ=255) gtCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGtaaaaacccgccgaagcgggtttttact > 1:822338‑M2/1‑38 (MQ=255) ggACAGTCATTCATCTTTCTGCCCCTCCAAACGCAAAAACCCGCCGAAGCGGGGTTTTACGTAAGCCa > 1:19165967/1‑68 (MQ=11) ggACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCa > 1:25497894/1‑68 (MQ=35) ggACAGTCATTCATCTTTCTGCCCCACCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCa > 1:19767416/1‑68 (MQ=25) aCAGTCATTCATGTTTCTGCCCATCCAAAAGCAAAAACCCGCCCAAGCGGGTTTTTACGTAAACCAgg > 1:7276145/1‑68 (MQ=11) aCAGTCATTCATCTTTCTGCGCCTCCAAAAGCAAAAACCCGCCGAAGCCCCTTTTTACGTAAACCAgg > 1:5322421/1‑68 (MQ=11) aCAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGACGCGGGTTTTTACGTAAACCAgg > 1:9557620/1‑68 (MQ=25) aCAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAACCCAgc > 1:12421458/1‑67 (MQ=16) aCAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAgg > 1:32451245/1‑68 (MQ=35) aCAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAgg > 1:9409949/1‑68 (MQ=35) aCAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAg < 1:12052197/67‑1 (MQ=35) aCAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAg < 1:9002647/67‑1 (MQ=35) aCAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAg < 1:17009681/67‑1 (MQ=35) aCAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAg < 1:17148746/67‑1 (MQ=35) aCAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAg < 1:17614854/67‑1 (MQ=35) aCAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAg < 1:20837686/67‑1 (MQ=35) aCAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAg < 1:2145886/67‑1 (MQ=35) aCAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAg < 1:36161013/67‑1 (MQ=35) aCAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGGTTTTACGTAAACCAgg > 1:20355482/1‑68 (MQ=25) aCAGTCATTCATCTTTCTGCCCCTACAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAgg > 1:38504699/1‑68 (MQ=25) cattcatCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGaa < 1:22228716/67‑1 (MQ=35) catCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGa < 1:5994742/68‑1 (MQ=35) catATTTCTGCCACTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTTAAACTGa < 1:6940714/68‑1 (MQ=11) atCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGa > 1:14116595/1‑67 (MQ=35) atCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGa > 1:37033110/1‑67 (MQ=35) atCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGa > 1:35117956/1‑67 (MQ=35) atCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGa > 1:33184556/1‑67 (MQ=35) atCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGa > 1:33783157/1‑67 (MQ=35) atCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGa > 1:33540028/1‑67 (MQ=35) tatttCTGCCCCTCCAAAATCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGAcc < 1:18851814/66‑1 (MQ=255) tCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGAcc > 1:35589682/1‑68 (MQ=35) cTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCg > 1:21865559/1‑68 (MQ=35) gCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTTCGTAAACCAGGTGAAACTGACCGATAAg > 1:16714799/1‑67 (MQ=25) gCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAg > 1:15795569/1‑67 (MQ=35) gCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAg > 1:10019949/1‑67 (MQ=35) gCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAg > 1:29108414/1‑67 (MQ=35) gCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGc < 1:2329502/68‑1 (MQ=35) cccTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCg > 1:30030339/1‑68 (MQ=35) tCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGctt < 1:22508117/68‑1 (MQ=40) aaaaTCAAAAACCCGCCGAACCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGctttct < 1:34659209/68‑1 (MQ=255) aaGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGgtttctgt > 1:38673839/1‑66 (MQ=9) aGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCtttt > 1:31651023/1‑68 (MQ=40) gCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTg > 1:26872912/1‑68 (MQ=39) | CCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTG > CP009273/3263361‑3263494 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |