New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | CP009273 | = 2499292 | 362 (0.760) | 21 (0.050) | 12/98 | NT | 5.8% | coding (820/1086 nt) | ypdF | Xaa‑Pro aminopeptidase |
? | CP009273 | = 2499321 | 364 (0.880) | coding (791/1086 nt) | ypdF | Xaa‑Pro aminopeptidase |
Only 100 of 616 total aligned reads displayed.
TGCCGATAGCGTGACCGGTGTTATGACCGAAATAGTCGCCATAACCTGCTTCTGTAATGACCCGGCGCGCGGCATCGTCAACCTGCTGGCAGCGCACGCCGGGGCGAATCGCGGAGATTGCTGCGAGCTGTGC > CP009273/2499226‑2499358 | gCCGATAGCGTGACCGGTGTTATGACCGAAATAGTCGCCATAACCTGCTTCTGTAATGACCCGgcgc > 1:36997387/1‑67 (MQ=255) gCCGATAGCGTGACCGGTGTTATGACCGAAATAGTCGCCATAACCTGCTTCTGTAATGACCCGgcgc > 1:21793742/1‑67 (MQ=255) gCCGATAGCGTGACCGGTGTTATGACCGAAATAGTCGCCATAACCTGCTTCTGTAATGACCCGgcgc > 1:15251850/1‑67 (MQ=255) gCCGATAGCGTGACCGGTGTTATGACCGAAATAGTCGCCATAACCTGCTTCTGTAATGACCCGgcgc > 1:39605057/1‑67 (MQ=255) cGATAGCGTGACCGGTGTTATGACCGAAATAGTCGCCATAACCTGCTTCTGTAATGACCCGGcgcgcg > 1:34811054/1‑68 (MQ=255) cGATAGCGTGACCGGTGTTATGACCGAAATAGTCGCCATAACCTGCTTCTGTAATGACCCGGcgcgcg < 1:31417323/68‑1 (MQ=255) aGCGTGACCGGTGTTATGACCGAAATAGTCGCCATAACCTGCTTCTGTAATGACCCGGCGCGCGGCAt < 1:26893793/68‑1 (MQ=255) gCGTGACCGGTGTTATGACCGAAATAGTCGCCATAACCTGCTTCTGTAATGACCCGGCGCGCGGCATc > 1:4968046/1‑68 (MQ=255) cGTGACCGGTGTTATGACCGAAATAGTCGCCATAACCTGCTTCTGTAATGACCCGGCGCGCGGCATCg > 1:21017697/1‑68 (MQ=255) cGTGACCGGTGTTATGACCGAAATAGTCGCCATAACCTGCTTCTGTAATGACCCGGCGCGCGGCATCg > 1:17385128/1‑68 (MQ=255) cGTGACCGGTGTTATGACCGAAATAGTCGCCATAACCTGCTTCTGTAATGACCCGGCGCGCGGCATCg > 1:16975161/1‑68 (MQ=255) cGTGACCGGTGTTATGACCGAAATAGTCGCCATAACCTGCTTCTGTAATGACCCGGCGCGCGGCATCg > 1:21509636/1‑68 (MQ=255) cGGTGTTATGACCGAAATAGTCGCCATAACCTGCTTCTGTAATGACCCGGCGCGCGGCATCGTCaa > 1:19828373/1‑66 (MQ=255) cGGTGTTATGACCGAAATAGTCGCCATAACCTGCTTCTGTAATGACCCGGCGCGCGGCATCGTCaa > 1:3179012/1‑66 (MQ=255) gtTATGACCGAAATAGTCGCCATAACCTGCTTCTGTAATGACCCGGCGCGCGGCATCGTCAACct > 1:29858896/1‑65 (MQ=255) gtTATGACCGAAATAGTCGCCATAACCTGCTTCTGTAATGACCCGGCGCGCGGCATCGTCAACct > 1:1604481/1‑65 (MQ=255) gtTATGACCGAAATACTCGCCATAACCTGCTTCTGTTATGACCCGGCGCGCTGCATCGTCAACctga < 1:30960587/67‑2 (MQ=255) gACCGAAATAGTCGCCATAACCTGCTTCTGTAATGACCCGGCGCGCGGCATCg > 1:15026503/1‑53 (MQ=255) gACCGAAATAGTCGCCATAACCTGCTTCTGTAATGACCCGGCGCGCGGCATCGTCAACCTGCTGGCa > 1:21952111/1‑67 (MQ=255) gACCGAAATAGTCGCCATAACCTGCTTCTGTAATGACCCGGCGCGCGGCATCGTCAACCTGCTGGCa > 1:22683859/1‑67 (MQ=255) gACCGAAATAGTCGCCATAACCTGCTTCTGTAATGACCCGGCGCGCGGCATCGTCAACCTGCTGGCa > 1:22838554/1‑67 (MQ=255) gACCGAAATAGTCGCCATAACCTGCTTCTGTAATGACCCGGCGCGCGGCATCGTCAACCTGCTGGCa > 1:23438661/1‑67 (MQ=255) gACCGAAATAGTCGCCATAACCTGCTTCTGTAATGACCCGGCGCGCGGCATCGTCAACCTGCTGGCa > 1:24117466/1‑67 (MQ=255) gACCGAAATAGTCGCCATAACCTGCTTCTGTAATGACCCGGCGCGCGGCATCGTCAACCTGCTGGCa > 1:32448205/1‑67 (MQ=255) gACCGAAATAGTCGCCATAACCTGCTTCTGTAATGACCCGGCGCGCGGCATCGTCAACCTGCTGGCa > 1:32196627/1‑67 (MQ=255) gACCGAAATAGTCGCCATAACCTGCTTCTGTAATGACCCGGCGCGCGGCATCGTCAACCTGCTGGCa > 1:10274807/1‑67 (MQ=255) gACCGAAATAGTCGCCATAACCTGCTTCTGTAATGACCCGGCGCGCGGCATCGTCAACCTGCTGGCa > 1:35419925/1‑67 (MQ=255) gACCGAAATAGTCGCCATAACCTGCTTCTGTAATGACCCGGCGCGCGGCATCGTCAACCTGCTGGCa > 1:8344600/1‑67 (MQ=255) gACCGAAATAGTCGCCATAACCTGCTTCTGTAATGACCCGGCGCGCGGCATCGTCAACCTGCTGGCa > 1:10968859/1‑67 (MQ=255) gACCGAAATAGTCGCCATAACCTGCTTCTGTAATGACCCGGCGCGCGGCATCGTCAACCTGCTGGCa > 1:7478779/1‑67 (MQ=255) gACCGAAATAGTCGCCATAACCTGCTTCTGTAATGACCCGGCGCGCGGCATCGTCAACCTGCTGGCa > 1:14551436/1‑67 (MQ=255) gACCGAAATAGTCGCCATAACCTGCTTCTGTAATGACCCGGCGCGCGGCATCGTCAACCTGCTGGCa > 1:10502359/1‑67 (MQ=255) ccGAAATAGTCGCCATAACCTGCTTCTGTAATGACCCGGCGCGCGGCATCGTCAACCTGCTGGCAgc > 1:30442811/1‑67 (MQ=255) ccGAAATAGTCGCCATAACCTGCTTCTGTAATGACCCGGCGCGCGGCATCGTCAACCTGCTGGCAgc > 1:34052125/1‑67 (MQ=255) aaTAGTCGCCATAACCTGCTTCTGTAATGACCCGGCGCGCGGCATCGTCAACCTGCTGGCAGCGCAcg > 1:31192645‑M2/1‑66 (MQ=255) aaTAGTCGCCATAACCTGCTTCTGTAATGACCCGGCGCGCGGCATCGTCAACCTGCTGGCAGCGCAcg > 1:22225194‑M2/1‑66 (MQ=255) aaTAGTCGCCATAACCTGCTTCTGTAATGACCCGGCGCGCGGCATCGTCAACCTGCTGGCAGCGCAcg > 1:20050072‑M2/1‑66 (MQ=255) aTAGTCGCCATAACCTGCTTCTGTAATGACCCGGCGCGCGGCATCGTCAACCTGCTGGCAGCGCAcg < 1:4091656‑M2/67‑3 (MQ=255) aTAGTCGCCATAACCTGCTTCTGTAATGACCCGGCGCGCGGCATCGTCAACCTGCTGGCAGCGCAcg < 1:25097229‑M2/67‑3 (MQ=255) tAGTCGCCATACCCTGCTTCTGTAAGGACCCGGCGCGCGGCATCGGCAACCTGCTGGCAGCGCAcgcc > 1:27272082‑M2/1‑64 (MQ=255) aGTCGCCATAACCTGCTTCTGTAATGACCCGGCGCGCGGCATCGTCAACCTGCTGGCTGCGCAcgccg < 1:6782199‑M2/68‑6 (MQ=255) cGCCATAACCTGCTTCTGTAATGACCCGGCGCGCGGCATCGTCAACCTGCTGGCAGCGCAcgccggg < 1:31315039‑M2/67‑8 (MQ=255) cGCCATAACCTGCTTCTGTAATGACCCGGCGCGCGGCATCGTCAACCTGCTGGCAGCGCAcgccggg < 1:8649518‑M2/67‑8 (MQ=255) cGCCATAACCTGCTTCTGTAATGACCCGGCGCGCGGCATCGTCAACCTGCTGGCAGCGCAcgccggg > 1:2476463‑M2/1‑60 (MQ=255) cGCCATAACCTGCTTCTGTAATGACCCGGCGCGCGGCATCGTCAACCTGCTGGCAGCGCAcgccggg < 1:17529983‑M2/67‑8 (MQ=255) cGCCATAACCTGCTTCTGTAATGACCCGGCGCGCGGCATCGTCAACCTGCTGGCAGCGCAcgccgg > 1:22299585‑M2/1‑60 (MQ=255) cGCCATAACCTGCGTCTGTAATGACCCGGCGCGCGGCATCGTCAACCTGCTGGCAGCGCAcgccggg > 1:11840953‑M2/1‑60 (MQ=255) tAACCTGCTTCTGTAATGACCCGGCGCGCGGCATCGTCAACCTGCTGGCAGCGCAcgccgggtcatta > 1:28223619‑M2/1‑55 (MQ=255) aCCTGCTTCTGTAATGACCCGGCGCGCGGCATCGTCAACCTGCTGGCAGCGCACGCCGGGGCGAATc > 1:39133723/1‑67 (MQ=255) cTGCTTCTGTAATGACCCGGCGtgcgctgccagcaggttgacgatgccgcgcgccgggtgattacaga > 1:33643893‑M1/1‑22 (MQ=255) cTGCTTCTGTAATGACCCGGCGCGCGGCATCGTCAACCTGCTGGCAGCGCACGCCGGGGCGAATcgcg > 1:19442450/1‑68 (MQ=255) cTGCTTCTGTAATGACCCGGCGCGCGGCATCGTCAACCTGCTGGCAGCGCACGCCGGGGCGAATcgcg > 1:16226082/1‑68 (MQ=255) cTGCTTCTGTAATGACCCGGCGCGCGGCATCGTCAACCTGCTGGCAGCGCACGCCGGGGCGAATcgcg < 1:28919269/68‑1 (MQ=255) cTGCTTCTGTAATGACCCGGCGCGCGGCATCGTCAACCTGCTGGCAGCGCACGCCGGCGCGAATcgcg > 1:12204715/1‑68 (MQ=255) gCTTCTGTAATGACCCGGCGCGCGGCATCGTCAACCTGCTGGCAGCGCAcgccgggtcattacagaag > 1:37441689‑M2/1‑49 (MQ=255) cTTCTGTAATGACCCGGCGCGCGGCATCGTCAACCTGCTGGCAGCGCACGCCGGGGCGAATCGCGgag > 1:9345126/1‑68 (MQ=255) ttCTGTAATGACCCGGCGCGCGGCATCGTCAACCTGCTGGCAGCGCACGCCGGGGCGAATCGCGgag < 1:9191633/67‑1 (MQ=255) tCTGTAATGACCCGGCGtgcgctgccagcaggttgacgatgccgcgcgccgggtcattacagaagcag > 1:17328163‑M1/1‑17 (MQ=255) tCTGTAATGACCCGGCGCGCGGCATCGTCAACCTGCTGGCAGCGCACGCCGGGGCGAATCGCGGAGAt > 1:38639950/1‑68 (MQ=255) gTAATGACCCGGCGCGCGGCATCGTCAACCTGCTGGCAGGGCACGCCGGGGCGAATCGCGGAGATtgc < 1:27121145/68‑1 (MQ=255) gTAATGACCCGGCGCGCGGCATCGTCAACCTGCTGGCAGCGCACGCCGGGGCGAATCGCGGAGAtt > 1:7881791/1‑66 (MQ=255) gTAATGACCCGGCGCGCGGCATCGTCAACCTGCTGGCAGCGCACGCCGGGGCGAATCGCGGAGATtgc < 1:38854499/68‑1 (MQ=255) gTAATGACCCGGCGCGCGGCATCGTCAACCTGCTGGCAGCGCACGCCGGGGCGAATCGCGGAGATtgc < 1:15629472/68‑1 (MQ=255) gTAATGACCCGGCGCGCGGCATCGTCAACCTGCTGGCAGCGCACGCCGGGGCGAATCGCGGAGATtgc < 1:32993324/68‑1 (MQ=255) gTAATGACCCGGCGCGCGGCATCGTCAACCTGCTGGCAGCGCACGCCGGGGCGAATCGCGGAGATtgc < 1:18273739/68‑1 (MQ=255) gTAATGACCCGGCGCGCGGCATCGTCAACCTGCTGGCAGCGCACGCCGGGGCGAATCGCGGAGATtgc < 1:34949064/68‑1 (MQ=255) gTAATGACCCGGCGCGCGGCATCGTCAACCTGCTGGCAGCGCACGCCGGGGCGAATCGCGGAGATtgc < 1:1880075/68‑1 (MQ=255) aaTGACCCGGCGCGCGGCATCGTCAACCTGCTGGCAGCGCACGCCGGGGCGAATCGCGGAGATtgct > 1:8939291/1‑67 (MQ=255) aaTGACCCGGCGCGCGGCATCGTCAACCTGCTGGCAGCGCACGCCGGGGCGAATCGCGGAGATtgct > 1:26370658/1‑67 (MQ=255) aaTGACCCGGCGCGCGGCATCGTCAACCTGCTGGCAGCGCACGCCGGGGCGAATCGCGGAGATtgct > 1:4420966/1‑67 (MQ=255) tGACCCGGCGCGCGGCATCGTCAACCTGCTGGCAGCGCACGCCGGGGCGAATCGCGGAGATTGCTGCg > 1:16686500/1‑68 (MQ=255) tGACCCGGCGCACGGCATCGTCAACCTGCTGGCAGCGCACGCCGGGGCGAATCGCGGAGATTGCTGCg > 1:10011238/1‑68 (MQ=255) gACCCGGCGCGCGGCATCGTCAACCTGCTGGCAGCGCACGCCGGGGCGAATCGCGGAGATTGCTGCGa > 1:11577314/1‑68 (MQ=255) gACCCGGCGCGCGGCATCGTCAACCTGCTGGCAGCGCACGCCGGGGCGAATCGCGGAGATTGCTGCGa > 1:27473074/1‑68 (MQ=255) aCCCGGCGCGCGGCATCGTCAACCTGCTGGCAGCGCAcgccgggtcattacagaagcaggttatggcg > 1:26684981‑M2/1‑37 (MQ=255) cccGGCGtgcgctgccagcaggttgacgatgccgcgcgccgggtcattacagaagcaggttatggcg > 1:6547594‑M1/1‑7 (MQ=255) cccGGCGtgcgctgccagcaggttgacgatgccgcgcgccgggtcattacagaagcaggttatggcg < 1:33288724‑M1/67‑61 (MQ=255) cccGGCGtgcgctgccagcaggttgacgatgccgcgcgccgggtcattacagaagcaggttatggcg > 1:14359149‑M1/1‑7 (MQ=255) cccGGCGCGCGGCATCGTCAACCTGCTGGCAGCGCACGCCGGGGCGAATCGCGGAGATTGCTGCGa > 1:6206287/1‑66 (MQ=255) cccGGCGCGCGGCATCGTCAACCTGCTGGCAGCGCACGCCGGGGCGAATCGCGGAGATTGCTGCGa > 1:13199791/1‑66 (MQ=255) cccGGCGCGCGGCATCGTCAACCTGCTGGCAGCGCACGCCGGGGCGAATCGCGGAGATTGCTGCGa > 1:38293327/1‑66 (MQ=255) cccGGCGCGCGGCATCGTCAACCTGCTGGCAGCGCACGCCGGGGCGAATCGCGGAGATTGCTGCGa > 1:34434315/1‑66 (MQ=255) cccGGCGCGCGGCATCGTCAACCTGCTGGCAGCGCACGCCGGGGCGAATCGCGGAGATTGCTGCGa > 1:33439260/1‑66 (MQ=255) ccGGCGCGCGGCATCGTCAACCTGCTGGCAGCGCACGCCGGGGCGAATCGCGGAGATTGCTGCGAGCt < 1:12554311/68‑1 (MQ=255) cGGCGtgcgctgccagcaggttgacgatgccgcgcgccgggtcattacagaagcaggttatggcgact < 1:13777209‑M1/68‑64 (MQ=255) cGGCGCGCGGCATCGTCAACCTGCTGGCAGCGCACGCCGGGGCGAATCGCGGAGATTGCTGCGAGCtg < 1:29441741/68‑1 (MQ=255) cGGCGCGCGGCATCGTCAACCTGCTGGCAGCGCACGCCGGGGCGAATCGCGGAGATTGCTGCGAGCtg < 1:37863197/68‑1 (MQ=255) cGGCGCGCGGCATCGTCAACCTGCTGGCAGCGCACGCCGGGGCGAATCGCGGAGATTGCTGCGAGCtg < 1:1641720/68‑1 (MQ=255) cGGCGCGCGGCATCGTCAACCTGCTGGCAGCGCACGCCGGGGCGAATCGCGGAGATTGCTGCGAGCtg < 1:7119790/68‑1 (MQ=255) ggCGCGCGGCATCGTCAACCTGCTGGCAGCGCACGCCGGGGCGAATCGCGGCGATTGCTGCGAGCtgt < 1:31561699/68‑1 (MQ=255) ggCGCGCGGCATCGTCAACCTGCTGGCAGCGCACGCCGGGGCGAATCGCGGAGATTGCTGCGAGCtgt > 1:36238643/1‑68 (MQ=255) ggCGCGCGGCATCGTCAACCTGCTGGCAGCGCACGCCGGGGCGAATCGCGGAGATTGCTGCGAGCtgt < 1:12760443/68‑1 (MQ=255) cgcgcgGCATCGTCAACCTGCTGGCAGCGCACGCCGGGGCGAGTCGCGGAGATGGCTGCGAGCtgtg > 1:28515773/1‑67 (MQ=255) cgcgcgGCATCGTCAACCTGCTGGCAGCGCACGCCGGGGCGAATCGCGGAGATTGCTGCGAGCtgtg < 1:20650373/67‑1 (MQ=255) cgcgcgGCATCGTCAACCTGCTGGCAGCGCACGCCGGGGCGAATCGCGGAGATTGCTGCGAGCtgtg > 1:25806427/1‑67 (MQ=255) cGtgcgctgccagcaggttgacgatgccgcgcgccgggtcattacagaagcaggttatggcgactatt > 1:24660840‑M1/1‑2 (MQ=255) cGtgcgctgccagcaggttgacgatgccgcgcgccgggtcattacagaagcaggttatggcgactatt > 1:596413‑M1/1‑2 (MQ=255) cGtgcgctgccagcaggttgacgatgccgcgcgccgggtcattacagaagcaggttatggcgactatt > 1:27939289‑M1/1‑2 (MQ=255) cGtgcgctgccagcaggttgacgatgccgcgcgccgggtcattacagaagcaggttatggcgactat < 1:5551188‑M1/67‑66 (MQ=255) gcgcgGCATCGTCAACCTGCTGGCAGCGCACGCCGGGGCGAATCGCGGAGATTGCTGCGAGCTGTGc < 1:5313732/67‑1 (MQ=255) | TGCCGATAGCGTGACCGGTGTTATGACCGAAATAGTCGCCATAACCTGCTTCTGTAATGACCCGGCGCGCGGCATCGTCAACCTGCTGGCAGCGCACGCCGGGGCGAATCGCGGAGATTGCTGCGAGCTGTGC > CP009273/2499226‑2499358 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |