| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 3323803 = | NA (NA) | 4 (0.010) +G |
3/110 | NT | NA | intergenic (+48/+138) | dacB/obgE | D‑alanyl‑D‑alanine carboxypeptidase/GTPase involved in cell partioning and DNA repair |
| ? | CP009273 | = 3734462 | NA (NA) | intergenic (+144/+7) | avtA/ysaA | valine‑pyruvate aminotransferase 1/putative hydrogenase, 4Fe‑4S ferredoxin‑type component | |||||
Only 100 of 763 total aligned reads displayed.
GATATTTATCAGAACAATTAGTCAAAAAGAAACCCCGGCACATGGCCGGGGCTTCAGATTATTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAAC > CP009273/3323735‑3323871 | aTCAGAACAATTAGTCAAAAAGAAACCCCGGCACATGGCCGGGGCTTCAGATTATTGACAAAGTgcgc < 1:37065418/68‑1 (MQ=255) aTCAGAACAATTAGTCAAAAAGAAACCCCGGCACATGGCCGGGGCTTCAGATTATTGACAAAGTgc > 1:37790261/1‑66 (MQ=255) aTCAGAACAATTAGTCAAAAAGAAACCCCGGCACATGGCCGGGGCTTCAGATTATTGACAAAGTgc > 1:20919252/1‑66 (MQ=255) aTCAGAACAATTAGTCAAAAAGAAACCCCGGCACATGGCCGGGGCTTCAGATTATTGACAAAGTgc > 1:4000412/1‑66 (MQ=255) tCAGAACAATTAGTCAAAAAGAAACCCCGGCACATGGCCGGGGCTTCAGATTATTGACAAAGTGCGCt > 1:31927975/1‑68 (MQ=255) tCAGAACAATTAGTCAAAAAGAAACCCCGGCACATGGCCGGGGCTTCAGATTATTGACAAAGTGCGCt > 1:31175844/1‑68 (MQ=255) tCAGAACAATTAGTCAAAAAGAAACCCCGGCACATGGCCGGGGCTTCAGATTATTGACAAAGTGCGCt > 1:1164458/1‑68 (MQ=255) tCAGAACAATTAGTCAAAAAGAAACCCCGGCACATGGCCGGGGCTTCAGATTATTGACAAAGTGCGCt > 1:9316154/1‑68 (MQ=255) tCAGAACAATTAGTCAAAAAGAAACCCCGGCACATGGCCGGGGCTTCAGATTATTGACAAAGTGCGCt > 1:21484044/1‑68 (MQ=255) tCAGAACAATTAGTCAAAAAGAAACCCCGGCACATGGCCGGGGCTTCAGATTATTGACAAAGTGCGCt > 1:5082747/1‑68 (MQ=255) tCAGAACAATTAGTCAAAAAGAAACCCCGGCACATGGCCGGGGCTTCAGATTATTGACAAAGTGCGCt > 1:4631929/1‑68 (MQ=255) tCAGAACAATTAGTCAAAAAGAAACCCCGGCACATGGCC‑GGGCTTCAGATTATTGACAAAGTGCGCtt > 1:36354381/1‑68 (MQ=255) acgccgcatctggcataaacaaagcgcactgttccggcgttgagaaacgccggaacAGTGCGCTTTGt > 1:2849350‑M1/57‑68 (MQ=255) aaCAATTAGTCAAAAAGAAACCCCGGCACATGGCCGGGGCTTCAGATTATTGACAAAGTGCGCTTTGt < 1:11471027/68‑1 (MQ=255) aCAATTAGTCAAACAGAAACCCCGGCCCATGGCCGGGGCTTCAGATTATTGACAAAGTGCGCTTTGt < 1:38926255/67‑1 (MQ=255) aCAATTAGTCAAAAAGAAACCCCGGCACATGGCCGGGGCTTCAGATTATTGACAAAGTGCGCTTTg < 1:18682258/66‑1 (MQ=255) aCAATTAGTCAAAAAGAAACCCCGGCACATGGCCGGGGCTTCAGATTATTGACAAAGTGCGCTTTGtt > 1:21652731/1‑68 (MQ=255) aCAATTAGTCAAAAAGAAACCCCGGCACATGGCCGGGGCTTCAGATTATTGACAAAGTGCGCTTTGtt > 1:7871672/1‑68 (MQ=255) aCAATTAGTCAAAAAGAAACCCCGGCACATGGCCGGGGCTTCAGATTATTGACAAAGTGCGCTTTGt < 1:9001471/67‑1 (MQ=255) aCAATTAGTCAAAAAGAAACCCCGGCACATGGCCGGGGCTTCAGATTATTGACAAAGTGCGCTTTGt < 1:18523115/67‑1 (MQ=255) aCAATTAGTCAAAAAGAAACCCCGGCACATGGCCGGGGCTTCAGATTAATGACAAAGTGCGATTTGtt > 1:17578450/1‑68 (MQ=255) aCAATTAGTCAAAAAGAAACCCCGGCACATGGCCGGGGCTTCAGAGTATTGACAAAGTGCGCTTTGtt > 1:29420053/1‑68 (MQ=255) cAATTAGTCAAAAAGAAACCCCGGCACATGGCCGGGGCTTCAGATTATTGACAAAGTGCGCTTTGttt > 1:24937872/1‑68 (MQ=255) ttAGTCAAAAAGAAACCCCGGCACATGGCCGGGGCTTCAGATTATTGACAAAGTGCGCTTTGTTTATg < 1:33662537/68‑1 (MQ=255) tAGTCAAAAAGAAACCCCGGCACATGGCCGGGGCTTCTGATTATTGACAAAGTTCGCTTTGTTTATg > 1:18978267/1‑67 (MQ=255) tAGTCAAAAAGAAACCCCGGCACATGGCCGGGGCTTCAGATTATTGACAAAGTGCGCTTTGTTTATg > 1:14003359/1‑67 (MQ=255) tAGTCAAAAAGAAACCCCGGCACATGGCCGGGGCTTCAGATTATTGACAAAGTGCGCTTTGTTTATGc < 1:36544948/68‑1 (MQ=255) tAGTCAAAAAGAAACCCCGGCACATGGCCGGGGCTTCAGATTATTGACAAAGTGCGCTTTGTTTATGc < 1:4387669/68‑1 (MQ=255) tCAAAAAGAAACCCCGGCACATGGCCGGGGCTTCAGATTATTGACAATGTGCGCTTTGTTTCTGCCgg > 1:6091595/1‑68 (MQ=255) tCAAAAAGAAACCCCGGCACATGGCCGGGGCTTCAGATTATTGACAAAGTGCGCTTTGTTTATGCCgg > 1:673521/1‑68 (MQ=255) tCAAAAAGAAACCCCGGCACATGGCCGGGGCTTCAGATTATTGACAAAGTGCGCTTTGTTTATGCCgg > 1:35838353/1‑68 (MQ=255) tCAAAAAGAAACCCCGGCACATGGCCGGGGCTTCAGAGTATTGACAAAGTGCGCTTTGTTTATGCCgg > 1:14259814/1‑68 (MQ=255) cAAAAAGAAACCCCGGCACATGGCCGGGGCTTCAGATTATTGACAAAGTGCGCTTTGTTTATGCCg < 1:15691218/66‑1 (MQ=255) cAAAAAGAAACCCCGGCACATGGCCGGGGCTTCAGATTATTGACAAAGTGCGCTTTGTTTATGCCg < 1:2458659/66‑1 (MQ=255) cAAAAAGAAACCCCGGCACATGGCCGGGGCTTCAGATTATTGACAAAGTGCGCTTTGTTTATGCCGGa < 1:5847942/68‑1 (MQ=255) aGAAACCCCGGCACATGGCCGGGGCTTCAGATTATTGACAAAGTGCGCTTTGTTTATGCCGGATgcgg < 1:8322417/68‑1 (MQ=255) aGAAACCCCGGCACATGGCCGGGGCTTCAGATTATTGACAAAGTGCGCTTTGTTTATGCCGGATgcgg < 1:38697664/68‑1 (MQ=255) aGAAACCCCGGCACATGGCCGGGGCTTCAGATTATTGACAAAGTGCGCTTTGTTTATGCCGGATgcg > 1:1003652/1‑67 (MQ=255) aGAAACCCCGGCACATGGCCGGGGCTTCAGATTATTGACAAAGTGCGCTTTGTTTATGCCGGATgcg > 1:5389504/1‑67 (MQ=255) aaCCCCGGCACATGGCCGGGGCTTCAGATTATTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGt < 1:3328523/68‑1 (MQ=255) aaCCCCGGCACATGGCCGGGGCTTCAGATTATTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGt < 1:14336604/68‑1 (MQ=255) aaCCCCGGCACATGGCCGGGGCTTCAGATTATTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGt < 1:19525313/68‑1 (MQ=255) aCCCCGGCACATGGCCGGGGCTTCAGATTATTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTa > 1:11268635/1‑68 (MQ=255) aCCCCGGCACATGGCCGGGGCTTCAGATTATTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTa > 1:25566818/1‑68 (MQ=255) ccgcactgttccggcgttgagaaacgccggaacAGTGCGCTTTGTTTATGCCAGATGCGGCGTAAACg > 1:34693427‑M1/34‑68 (MQ=255) cGGCCCATGGCCGGGGCTTCAGATTATTGACAAAGTGCGCTTTGTTTATGCCGGAGGCGGCGTAAACg < 1:7468218/68‑1 (MQ=255) cGGCACATGGCCGGGGCTTCAGATTATTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACg < 1:29001665/68‑1 (MQ=255) cGGCACATGGCCGGGGCTTCAGATTATTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACg < 1:39331631/68‑1 (MQ=255) cGGCACATGGCCGGGGCTTCAGATTATTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACg < 1:1234155/68‑1 (MQ=255) cGGCACATGGCCGGGGCTTCAGATTATTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACg < 1:7078231/68‑1 (MQ=255) cGGCACATGGCCGGGGCTTCAGATTATTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACg < 1:16305164/68‑1 (MQ=255) cGGCACATGGCCGGGGCTTCAGATTATTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACg < 1:17149378/68‑1 (MQ=255) cGGCACATGGCCGGGGCTTCAGATTATTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACg < 1:19947901/68‑1 (MQ=255) ggCACATGGCCGGGGCTTCAGATTATTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGc < 1:14936905/68‑1 (MQ=255) ggCACATGGCCGGGGCTTCAGATTATTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGc < 1:16762298/68‑1 (MQ=255) ggCACATGGCCGGGGCTTCAGATTATTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGc < 1:18323583/68‑1 (MQ=255) ggCACATGGCCGGGGCTTCAGATTATTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGc < 1:35321480/68‑1 (MQ=255) acaTGGCCGGGGCTTCAGATTATTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCtt > 1:26242390/1‑68 (MQ=255) acaTGGCCGGGGCTTCAGATTATTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCtt < 1:30875487/68‑1 (MQ=255) acaTGGCCGGGGCTTCAGATTATTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCtt > 1:34119225/1‑68 (MQ=255) acaTGGCCGGGGCTTCAGATTATTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCtt > 1:1364357/1‑68 (MQ=255) acaTGGCCGGGGCTTCAGATTATTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCtt > 1:22692152/1‑68 (MQ=255) acaTGGCCGGGGCTTCAGATTATTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCt < 1:22352943/67‑1 (MQ=255) acaTGGCCGGGGCTTCAGATTATTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCt < 1:22150513/67‑1 (MQ=255) gCCGGGGCTTCAGATTATTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCg > 1:38447940/1‑68 (MQ=255) gCCGGGGCTTCAGATTATTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCg > 1:29959095/1‑68 (MQ=255) gCCGGGGCTTCAGATTATTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCg > 1:6576049/1‑68 (MQ=255) gCCGGGGCTTCAGATTATTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCg > 1:1271640/1‑68 (MQ=255) cGGGGCTTCAGATTATTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCgg > 1:10686892/1‑67 (MQ=255) cGGGGCTTCAGATTATTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGc < 1:3807593/68‑1 (MQ=255) cGGGGCTTCAGATTATTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGc < 1:27189112/68‑1 (MQ=255) ggCTTCTGATTATTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCt < 1:7729672/67‑1 (MQ=255) ggCTTCAGATTATTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCt < 1:9640506/67‑1 (MQ=255) ggCTTCAGATTATTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCt < 1:15405678/67‑1 (MQ=255) ggCTTCAGATTATTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCt > 1:17718993/1‑67 (MQ=255) ggCTTCAGATTATTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCt < 1:24188903/67‑1 (MQ=255) ggCTTCAGATTATTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCt < 1:25147260/67‑1 (MQ=255) gCTTCAGATTATTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTAc > 1:1193290/1‑68 (MQ=255) gCTTCAGATTATTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTAc > 1:15136937/1‑68 (MQ=255) gCTTCAGATTATTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTAc > 1:23056730/1‑68 (MQ=255) cTTCAGATTATTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTAc < 1:20196910/67‑1 (MQ=255) aGATTATTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACaaaa > 1:283013/1‑67 (MQ=40) attattGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCg > 1:206367/1‑68 (MQ=40) ttattGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGt > 1:26606676/1‑68 (MQ=40) ttattGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGt > 1:2391085/1‑68 (MQ=40) tattGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTg < 1:27847555/68‑1 (MQ=39) attGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGc > 1:16015093/1‑68 (MQ=37) gACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCaga > 1:37368520/1‑66 (MQ=25) gACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCaaa > 1:27580159/1‑68 (MQ=35) gACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCaaa > 1:36852962/1‑68 (MQ=35) cAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCAAAt < 1:30221616/67‑1 (MQ=35) cAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCAAAt < 1:35541485/67‑1 (MQ=35) cAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCAAAt < 1:13260011/67‑1 (MQ=35) cAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCAAAt < 1:34975784/67‑1 (MQ=35) cAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCAAAt < 1:19363559/67‑1 (MQ=35) cAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCAAAt < 1:23538180/67‑1 (MQ=35) cAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCAAAt < 1:32711565/67‑1 (MQ=35) cAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCAAAt < 1:3246648/67‑1 (MQ=35) cAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCAAAt < 1:31663639/67‑1 (MQ=35) aGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCa > 1:34320474/1‑67 (MQ=35) | GATATTTATCAGAACAATTAGTCAAAAAGAAACCCCGGCACATGGCCGGGGCTTCAGATTATTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAAC > CP009273/3323735‑3323871 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |