| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 1242300 = | 559 (1.340) | 1604 (4.060) | 80/106 | NT | 76.4% | coding (533/1698 nt) | treA | periplasmic trehalase |
| ? | CP009273 | = 1292972 | 460 (1.170) | coding (606/2676 nt) | adhE | fused acetaldehyde‑CoA dehydrogenase/iron‑dependent alcohol dehydrogenase/pyruvate‑formate lyase deactivase | |||||
Only 100 of 2213 total aligned reads displayed.
GGTATATTACTGGGACAGTTACTTCACCATGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/1242368‑1242300‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcATACAGCTCCGGTAAACCAGCTATCGGTGTAGGCGCGGGCAACACTCCAGTTGTTATCGATGAAA < CP009273/1292972‑1292908 ATATTACTGGGACAGTTACTTCACCATGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCAT < 1:25719806/68‑1 TTACTGGGACAGTTACTTCACCATGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACA > 1:17467540/1‑68 TTACTGGGACAGTTACTTCACCATGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACA > 1:32717006/1‑68 TTACTGGGACAGTTACTTCACCATGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACA > 1:32408782/1‑68 TTACTGGGACAGTTACTTCACCATGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACA < 1:15206702/68‑1 ACTGGGACAGTTACTTCACCATGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACAGC < 1:22788846/68‑1 ACTGGGACAGTTACTTCACCATGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACAGC < 1:14050548/68‑1 ACTGGGACAGTTACTTCACCATGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACA > 1:19383469/1‑66 ACTGGGACAGTTACTTCACCATGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACA > 1:33457941/1‑66 ACTGGGACAGTTACTTCACCATGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACA > 1:34221650/1‑66 ACTGGGACAGTTACTTCACCATGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACA > 1:34559467/1‑66 ACTGGGACAGTTACTTCACCATGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACA > 1:4723774/1‑66 ACTGGGACAGTTACTTCACCATGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACA > 1:21350127/1‑66 ACTGGGACAGTTACTTCACCATGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACA > 1:29430177/1‑66 ACTGGGACAGTTACTTCACCATGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACA > 1:23265581/1‑66 ACTGGGACAGTTACTTCACCATGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACA > 1:23516858/1‑66 ACTGGGACAGTTACTTCACCATGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACA > 1:28804398/1‑66 ACTGGGACAGTTACTTCACCATGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACA > 1:24334689/1‑66 ACTGGGACAGTTACTTCACCATGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACA > 1:26542389/1‑66 ACTGGGACAGTTACTTCACCATGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACA > 1:8871779/1‑66 TGGGACAGTTACTTCACCATGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACAGCT > 1:4976217/1‑67 TGGGACAGTTACTTCACCATGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACAGCT > 1:10578808/1‑67 TGGGACAGTTACTTCACCATGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACAGCT > 1:15534109/1‑67 TGGGACAGTTACTTCACCATGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACAGCT > 1:33239058/1‑67 TGGGACAGTTACTTCACCATGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACAGCT > 1:17814320/1‑67 GACAGTTACTTCACCATGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACAGCTCCGG > 1:14381961/1‑68 GACAGTTACTTCACCATGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACAGCTCCGG > 1:33960909/1‑68 GACAGTTACTTCACCATGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACAGCTCCGG > 1:18444903/1‑68 GACAGTTACTTCACCATGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACAGCTCCGG > 1:21004075/1‑68 ACAGTTACTTCACCATGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACAGCTCCGGT > 1:10004827/1‑68 ACAGTTACTTCACCATGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACAGCTCCGGT > 1:12407744/1‑68 ACAGTTACTTCACCATGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACAGCTCCGGT > 1:12764994/1‑68 ACAGTTACTTCACCATGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACAGCTCCAGT > 1:6834787/1‑68 TACTTCACCATGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACAGCTCCGGTAAACC < 1:7944032/68‑1 TACTTCACCATGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACAGCTCCGGTAAACC < 1:6509440/68‑1 ACTTCACCATGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACAGCTCCGGTAAACCc > 1:3618045/1‑67 ACTTCACCATGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACAGCTCCGGTAAACCA > 1:25914603/1‑68 CTTCACCATGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACAGCTCCGGTAAACCAG < 1:2619445/68‑1 TTCACCATGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACAGCTCCGGTAAACCA > 1:32102499/1‑66 CACCATGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACAGCTCCGGTAAACCAGCTA > 1:30133519/1‑68 CACCATGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACAGCTCCGGTAAACCAGCTA > 1:20661668/1‑68 CACCATGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACAGCTCCGGTAAACCAGCTA > 1:7661736/1‑68 CACCATGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACAGCTCCGGTAAACCAGCTA > 1:3937908/1‑68 CACCATGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACAGCTCCGGTAAACCAGCTA > 1:19743992/1‑68 CACCATGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACAGCTCCGGTAAACAAGCTA > 1:16859513/1‑68 CCATGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACAGCTCCGGTAAACCAGCTATC > 1:14871932/1‑68 ATGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACAGCTCCGGTAAACCAGCTATCGG > 1:25119944/1‑68 TGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACAGCTCCGGTAAACCAGCTATCGGT < 1:6225916/68‑1 TGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACAGCTCCGGTAAACCAGCTATCGGT < 1:29048189/68‑1 TGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACAGCTCCGGTAAACCAGCTATCGGT < 1:27778398/68‑1 TGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACAGCTCCGGTAAACCAGCTATCGGT < 1:2752732/68‑1 TGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACAGCTCCGGTAAACCAGCTATCGGT < 1:8226783/68‑1 TGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACAGCTCCGGTAAACCAGCTATCGGT < 1:9694345/68‑1 TGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACAGCTCCGGTAAACCAGCTATCGGT < 1:10881202/68‑1 TGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACAGCTCCGGTAAACCAGCTATCGGT < 1:11379232/68‑1 TGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACAGCTCCGGTAAACCAGCTATCGGT < 1:18615079/68‑1 TGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACAGCTCCGGTAAACCAGCTATCGGT < 1:16473374/68‑1 TGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACAGCTCCGGTAAACCAGCTATCGGT < 1:22563732/68‑1 AGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACAGCTCCGGTAAACCAGCTATCGGTGTAG > 1:20384093/1‑68 GACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACAGCTCCGGTAAACCAGCTATCGGTGTAGGC > 1:18062305/1‑68 GACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACAGCTCCGGTAAACCAGCTATCGGTGTAGGC > 1:20140757/1‑68 ACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACAGCTCCGGTAAACCAGCTATCGGTGTAGGC > 1:5801593/1‑67 ACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACAGCTCCGGTAAACCAGCTATCGGTGTAGGC > 1:25412189/1‑67 ACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACAGCTCCGGTAAACCAGCTATCGGTGTAGGC > 1:19050/1‑67 ACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACAGCTCCGGTAAACCAGCTATCGGTGTAGGC > 1:16217333/1‑67 ACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACAGCTCCGGTAAACCAGCTATCGGTGTAGGC > 1:21698267/1‑67 ACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACAGCTCCGGTAAACCAGCTATCGGTGTAGGC > 1:4239428/1‑67 ACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACAGCTCCGGTAAACCAGCTATCGGTGTAGGC > 1:14613383/1‑67 ACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACAGCTCCGGTAAACCAGCTATCGGTGTAGGC > 1:3106644/1‑67 ACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACAGCTCCGGTAAACCAGCTATCGGTGTAGGC > 1:3037061/1‑67 ACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACAGCTCCGGTAAACCAGCTATCGGTGTAGGC > 1:13718539/1‑67 ACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACAGCTCCGGTAAACCAGCTATCGGTGTAGGC > 1:13116485/1‑67 ACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACAGCTCCGGTAAACCAGCTATCGGTGTAGGC > 1:7130712/1‑67 ACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACAGCTCCGGTAAACCAGCTATCGGTGTAGGC > 1:28451261/1‑67 ACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACAGCTCCGGTAAACCAGCTATCGGTGTAGGC > 1:28080052/1‑67 ACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACAGCTCCGGTAAACCAGCTATCGGTGTAGGC > 1:12011869/1‑67 ACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACAGCTCCGGTAAACCAGCTATCGGTGTAGGC > 1:26975047/1‑67 TGCCGAAAGCGGTCACTGGGATAAAGTCGCATACAGCTCCGGTAAACCAGCTATCGGTGTAGGCGCGG < 1:1338769/68‑1 TGCCGAAAGCGGTCACTGGGATAAACTCGCATACAGCTCCGGTAACCCAGCTATCGGTGTAGGCGCGG < 1:33648293/68‑1 CGAAAGCGGTCACTGGGATAAAGTCGCATACAGCTCCGGTAAACCAGCTATCGGTGTAGGCGCGGGC < 1:31786862/67‑1 AAGCGGTCACTGGGATAAAGTCGCATACAGCTCCGGTAAACCAGCTATCGGTGTAGGCGCGGGCAAC < 1:10249747/67‑1 AGCGGTCACTGGGATAAAGTCGCATACAGCTCCGGTAAACCAGCTATCGGTGTAGGCGCGGGCAAC > 1:11721965/1‑66 GCGGTCACTGGGATAAAGTCGCATACAGCTCCGGTAAACCAGCTATCGGTGTAGGCGCGGGCAACAC > 1:15864666/1‑67 GGTCACTGGGATAAAGTCGCATACAGCTCCGGTAAACCAGCTATCGGTGTAGGCGCGGGCAACACT < 1:30720404/66‑1 GGTCACTGGGATAAAGTCGCATACAGCTCCGGTAAACCAGCTATCGGTGTAGGCGCGGGCAACACT < 1:24010538/66‑1 GGTCACTGGGATAAAGTCGCATACAGCTCCGGTAAACCAGCTATCGGTGTAGGCGCGGGCAACACT < 1:24596864/66‑1 GGTCACAGGGATAAAGTCGCATACAGCTCCGGTAAACCAGCTATCGGTGTAGGCGCGGGCAACACT < 1:17140781/66‑1 CACTGGGATAAAGTCGCATACAGCTCCGGTAAACCAGCTATCGGTGTAGGCGCGGGCAACACTCCAGT < 1:2725374/68‑1 CACTGGGATAAAGTCGCATACAGCTCCGGTAAACCAGCTATCGGTGTAGGCGCGGGCAACACTCCAG < 1:22123235/67‑1 ACTGGGATAAAGTCGCATACAGCTCCGGTAAACCAGCTATCGGTGTAGGCGCGGGCAACACTCCAGT < 1:29856617/67‑1 GGGATAAAGTCGCATACAGCTCCGGTAAACCAGCTATCGGTGTAGGCGCGGGCAACACTCCAGTTGTT > 1:9222802/1‑68 GGATAAAGTCGCATACAGCTCCGGTAAACCAGCTATCGGTGTAGGCGCGGGCAACACTCCAGTTGTTA > 1:24921729/1‑68 ATAAAGTCGCATACAGCTCCGGTAAACCAGCTATCGGTGTAGGCGCGGGCAACACTCCAGTTGTTAT < 1:31455203/67‑1 TAAAGTCGCATACAGCTCCGGTAAACCAGCTATCGGTGTAGGCGCGGGCAACACTCCAGTTGTTATCG < 1:19974083/68‑1 TAAAGTCGCATACAGCTCCGGTAAACCAGCTATCGGTGTAGGCGCGGGCAACACTCCAGTTGTTATCG < 1:862048/68‑1 TAAAGTCGCATACAGCTCCGGTAAACCAGCTATCGGTGTAGGCGCGGGCAACACTCCAGTTGTTATCG < 1:32956374/68‑1 AGTCGCATACAGCTCCGGTAAACCAGCTATCGGTGTAGGCGCGGGCAACACTCCAGTTGTTATCGATG > 1:23741943/1‑68 AGTCGCATACAGCTCCGGTAAACCAGCTATCGGTGTAGGCGCGGGCAACACTCCAGTTGTTATCGATG > 1:5482016/1‑68 GTCGCATACAGCTCCGGTAAACCAGCTATCGGTGTAGGCGCGGGCAACACTCCAGTTGTTATCGATGA > 1:9442602/1‑68 TCGCATACAGCTCCGGTAAACCAGCTATCGGTGTAGGCGCGGGCAACACTCCAGTTGTTATCGATGAA > 1:7363833/1‑68 GGTATATTACTGGGACAGTTACTTCACCATGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/1242368‑1242300‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcATACAGCTCCGGTAAACCAGCTATCGGTGTAGGCGCGGGCAACACTCCAGTTGTTATCGATGAAA < CP009273/1292972‑1292908 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |