| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 1823121 = | 198 (0.470) | 10 (0.030) | 6/94 | NT | 5.5% | coding (871/1479 nt) | astD | succinylglutamic semialdehyde dehydrogenase |
| ? | CP009273 | 1823160 = | 178 (0.510) | coding (832/1479 nt) | astD | succinylglutamic semialdehyde dehydrogenase | |||||
TTCAGTCGGCGTTTGTCACAGCCGGTCAACGCTGCACCTGCGCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/1823195‑1823121‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcgcaggTGCAGCGTTGACCGGCTGTGACAAACGCCGACTGAATGGTCAGATGGACAGCCGCGTCGATATCCG > CP009273/1823160‑1823225 TTCAGTCGGCGTTTGTCACAGCCGGTCAACGCTGCACCTGCGCCCGCCGTTTATTGCTGAAAAGCGGG > 1:15224068/1‑68TTCAGTCGGCGTTTGTCACAGCCGGTCAACGCTGCACCTGCGCCCGCCGTTTATTGCTGAAAAGCGGG < 1:8561850/68‑1TTCAGTCGGCGTTTGTCACAGCCGGACAACGCTGCACCTGCGCCCGCCGTTTATTGCTGAAAAGCGGG > 1:23394782/1‑68 TCAGTCGGCGTTTGTCACAGCCGGTCAACGCTGCACCTGCGCCCGCCGTTTATTGCTGAAAAGCGGGG < 1:27750779/68‑1 TCAGTCGGCGTTTGTCACAGCCGGTCAACGCTGCACCTGCGCCCGCCGTTTATTGCTGAAAAGCGGGG < 1:21393558/68‑1 TCAGTCGGCGTTTGTCACAGCCGGTCAACGCTGCACCTGCGCCCGCCGTTTATTGCTGAAAAGCGGGG < 1:13309854/68‑1 TCAGTCGGCGTTTGTCACAGCCGGTCAACGCTGCACCTGCGCCCGCCGTTTATTGCTGAAAAGCGGGG < 1:24763267/68‑1 TCAGTCGGCGTTTGTCACAGCCGGTCAACGCTGCACCTGCGCCCGCCGTTTATTGCTGAAAAGCGGGG < 1:22966609/68‑1 TCAGTCGGCGTTTGTCACAGCCGGTCAACGCTGCACCTGCGCCCGCCGTTTATTGCTGAAAAGCGGG > 1:5193377/1‑67 TCAGTCGGCGTTTGTCACAGCCGGTCAACGCTGCACCTGCGCCCGCCGTTTATTGCTGAAAAGCGGG > 1:1186183/1‑67 TCAGTCGGCGTTTGTCACAGCCGGTCAACGCTGCACCTGCGCCCGCCGTTTATTGCTGAAAAGCGGG > 1:29641419/1‑67 CAGTCGTCGTTTGTCACAGCCGGTCAACGCTGCACCTGCGCCCGCCGTTTATTGCTGAAAAGCGGGGC < 1:5823947/68‑1 CAGTCGGCGTTTGTCACAGCCGGTCAACGCTGCACCTGCGCCCGCCGTTTATTGCTGAAAAGCGGGGC > 1:30283186/1‑68 CAGTCGGCGTTTGTCACAGCCGGTCAACGCTGCACCTGCGCCCGCCGTTTATTGCTGAAAAGCGGGGC < 1:22675473/68‑1 CAGTCGGCGTTTGTCACAGCCGGTCAACGCTGCACCTGCGCCCGCCGTTTATTGCTGAAAAGCGGGGC < 1:3223504/68‑1 CAGTCGGCGTTTGTCACAGCCGGTCAACGCTGCACCTGCGCCCGCCGTTTATTGCTGAAAAGCGGGGC < 1:3266010/68‑1 CAGTCGGCGTTTGTCACAGCCGGTCAACGCTGCACCTGCGCCCGCCGTTTATTGCTGAAAAGCGGGGC < 1:29522899/68‑1 CAGTCGGCGTTTGTCACAGCCGGTCAACGCTGCACCTGCGCCCGCCGTTTATTGCTGAAAAGCGGGGC < 1:27286645/68‑1 CAGTCGGCGTTTGTCACAGCCGGTCAACGCTGCACCTGCGCCCGCCGTTTATTGCTGAAAAGCGGGGC > 1:21003129/1‑68 CAGTCGGCGTTTGTCACAGCCGGTCAACGCTGCACCTGCGCCCGCCGTTTATTGCTGAAAAGCGGGGC > 1:27613716/1‑68 CAGTCGGCGTTTGTCACAGCCGGTCAACGCTGCACCTGCGCCCGCCGTTTATTGCTGAAAAGCGGGGC < 1:9407565/68‑1 CAGTCGGCGTTTGTCACAGCCGGTCAACGCTGCACCTGCGCCCGCCGTTTATTGCTGAAAAGCGGGGC < 1:6453464/68‑1 CAGTCGGCGTTTGTCACAGCCGGTCAACGCTGCACCTGCGCCCGCCGTTTATTGCTGAAAAGCGGGGC < 1:7007520/68‑1 CAGTCGGCGTTTGTCACAGCCGGTCAACGCTGCACCTGCGCCCGCCGTTTATTGCTGAAAAGCGGGGC > 1:12381847/1‑68 CAGTCGGCGTTTGTCACAGCCGGTCAACGCTGCACCTGCGCCCGCCGTTTATTGCTGAAAAGCGGGGC < 1:17865168/68‑1 CAGTCGGCGTTTGTCACAGCCGGTCAACGCTGCACCTGCGCCCGCCGTTTATTGCTGAAAAGCGGGGC < 1:8758087/68‑1 CAGTCGGCGTTTGTCACAGCCGGTCAACGCTGCACCTGCGCCCGCCGTTTATTGCTGAAAAGCGGGGC < 1:8316275/68‑1 CAGTCGGCGTTTGTCACAGCCGGTCAACGCTGCACCTGCGCCCGCCGTTTATTGCTGAAAAGCGGGGC < 1:8464737/68‑1 CAGTCGGCGTTTGTCACAGCCGGTCAACGCTGCACCTGCGCCCGCCGTTTATTGCTGAAAAGCGGGGC > 1:13678679/1‑68 CAGTCGGCGTTTGTCACAGCCGGTCAACGCTGCACCTGCGCCCGCCGTTTATTGCTGAAAAGCGGGGC < 1:13319663/68‑1 CAGTCGGCGTTTGTCACAGCCGGTCAACGCTGCACCTGCG‑CCGCCGTTTATTGCTGAAAAGCGGGGCG < 1:12175688/68‑1 CAGTCGGCGGTTGTCACAGCCGGTCAACGCTGCACCTGCGCCCGCCGTTTATTGCTGAAAAGCGGGGC < 1:12734874/68‑1 acTCGGCGTTTGTCACAGCCGGTCAACGCTGCACCTGCGCCCGCCGTTCATTGCTGAAAAGCGGGGCG < 1:22470230/66‑1 GTCGGCGTTTGTCACAGCCGGTCAACGCTGCACCTGCGCCCGCCGTTTATTGCTGAGAAGCGGGGCGC > 1:23587957/1‑68 TCGGCGTTTGTCACAGCCGGTCAACGCTGCACCTGCGCCCGCCGTTTATTGCTGAAAAGCGGGGCGCA > 1:33233200/1‑68 CGGCGTTTGTCACAGCCGGTCAACGCTGCACCTGCGCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAG > 1:12871145/1‑68 CGGCGTTTGTCACAGCCGGTCAACGCTGCACCTGCGCCCGCCGTTTATTGCTGAAAAGCGGGGCGCA < 1:24017436/67‑1 CGGCGTTTGTCACAGCCGGTCAACGCTGCACCTGCGCCCGCCGTTTATTGCTGAAAAGCGGGGCG < 1:23151427/65‑1 CGGCGTTTGTCACAGCCGGTCAACGCTGCACCTGCGCCCGCCGTTTATTGCTGAAAAGCGGGGCG < 1:23839152/65‑1 CGGCGTTTGTCACAGCCGGTCAACGCTGCACCTGCGCCCGCCGTTTATTGCTGAAAAGCGGGGCG < 1:29377769/65‑1 CGGCGTTTGTCACAGCCGGTCAACGCTGCACCTGCGCCCGCCGTTTATTGCTGAAAAGCGGGGCG < 1:11911190/65‑1 CGGCGTTTGTCACAGCCGGGCAACGCTGCACCTGCGCCCGCCGTTTATTGCTGAAAAGCGGGGCG < 1:4154417/65‑1 CGGCGTTTGACACAGCCGGTCAACGCTGCACCTGCGCCCGCCGTTTATTGCTGAAAAGCGGGGCG < 1:20497194/65‑1 GGCGTTTGTCACAGCCGGTCAACGCTGCACCTGCGCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGG < 1:11694060/68‑1 GGCGTTTGTCACAGCCGGTCAACGCTGCACCTGCGCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGG < 1:31823612/68‑1 GGCGTTTGTCACAGCCGGTCAACGCTGCACCTGCGCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGG < 1:31765905/68‑1 GGCGTTTGTCACAGCCGGTCAACGCTGCACCTGCGCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGG > 1:24564776/1‑68 GGCGTTTGTCACAGCCGGTCAACGCTGCACCTGCGCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGG < 1:25075367/68‑1 CGTTTGTCCCAGCCGGTCAACGCTGCCCCTGCGCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGT < 1:20769464/67‑1 CGTTTGTCCCAGCCGGGCAACGCTGCACCTGCGCCCGCCGTTTATTGCTGAAACGCGGGGCGCAGGT < 1:11794583/67‑1 CGTTTGTCACCGCCGGTCAACGCTGCACCTGCGCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGT < 1:29869179/67‑1 CGTTTGTCACAGCCGGTCAACGCTGCACCTGCGCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGT < 1:795408/67‑1 CGTTTGTCACAGCCGGTCAACGCTGCACCTGCGCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGT < 1:11095247/67‑1 CGTTTGTCACAGCCGGTCAACGCTGCACCTGCGCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGT < 1:17294705/67‑1 CGTTTGTCACACCCGGGCAACGCGGCACCTGCGCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGT < 1:29327040/67‑1 GTTTGTCACAGCCGGGCAACGCTGCACCTGCGCCCGCCGTTTATTGCTGAAACGCGGGGCGCAGGTGC < 1:18748708/68‑1 TGTCCCAGCCGGTCACCGCTGCACCTGCGCCCGCCGTTTATTGCTCAAACGGGGGGCGCAGGTGCAGC < 1:1496735/68‑1 gggCAACGCGGCACCTGCGCCCGCCGTTTATTGCGGAAAAGCGGGGCGCAGGGGCAGCGTTGACCGGC < 1:28445542/65‑1 ggcCAACGCTGCACCTGCGCCCGCCGTTTATGGCTGAAACGCGGGGCGCAGGTGCCGCGTTGACCGGC < 1:32552753/65‑1 gcCCTGCGCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGTGCAGCGTTGACCGGCTGTGACAAACG < 1:24560611/66‑1 CCTGCGCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGTGCAGCGTTGACCGGCTGTGACAAACGCC > 1:34089178/1‑68 CCTGCGCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGTGCAGCGTTGACCGGCTGTGACAAACGCC > 1:25673570/1‑68 GCGCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGTGCAGCGTTGACCGGCTGTGACAAACGCCGAC < 1:21364494/68‑1 GCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGTGCAGCGTTGACCGGCTGTGACAAACGCCGACTG > 1:13085038/1‑68 GCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGTGCAGCGTTGACCGGCTGTGACAAACGCCGACTG < 1:6707811/68‑1 TTATTGCTGAAAAGCGGGGCGCAGGTGCAGCGTTGACCGGCTGTGACAAACGCCGACTGAATGGTCA < 1:18723182/67‑1 GGGCGCAGGTGCAGCGTTGACCGGCTGTGACAAACGCCGACTGAATGGTCAGATGGACAGCCGCGTC < 1:17010297/67‑1 GCGCAGGTGCAGCGTTGACCGGCTGTGACAAACGCCGACTGAATGGTCAGATGGACAGCCGCGTCGAT > 1:9758491/1‑68 CGCAGGTGCAGCGTTGACCGGCTGTGACAAACGCCGACTGAATGGTCAGATGGACAGCCGCGTCGATA > 1:18433326/1‑68 CGCAGGTGCAGCGTTGACCGGCTGTGACAAACGCCGACTGAATGGTCAGATGGACAGCCGCGTCGAT < 1:27397035/67‑1 CGCAGGTGCAGCGTTGACCGGCTGTGACAAACGCCGACTGAATGGTCAGATGGACAGCCGCGTCGAT < 1:30127562/67‑1 CGCAGGTGCAGCGTTGACCGGCTGTGACAAACGCCGACTGAATGGTCAGATGGACAGCCGCGTCGAT < 1:14452723/67‑1 CGCAGGTGCAGCGTTGACCGGCTGTGACAAACGCCGACTGAATGGTCAGATGGACAGCCGCGTCGAT < 1:26961459/67‑1 CGCAGGTGCAGCGTTGACCGGCTGTGACAAACGCCGACTGAATGGTCAGATGGACAGCCGCGTCGAT < 1:23917337/67‑1 CGCAGGTGCAGCGTTGACCGGCTGTGACAAACGCCGACTGAATGGTCAGATGGACAGCCGCGTCGAT < 1:21468598/67‑1 GCAGGTGCAGCGTTGACCGGCTGTGACAAACGCCGACTGAATGGTCAGATGGACAGCCGCGTCGATAT < 1:26159869/68‑1 AGGTGCAGCGTTGACCGGCTGTGACAAACGCCGACTGAATGGTCAGATGGACAGCCGCGTCGATATC < 1:26728919/67‑1 AGGTGCAGCGTTGACCGGCTGTGACAAACGCCGACTGAATGGTCAGATGGACAGCCGCGTCGATATC < 1:21502122/67‑1 AGGTGCAGCGTTGACCGGCTGTGACAAACGCCGACTGAATGGTCAGATGGACAGCCGCGTCGATATC < 1:7377649/67‑1 AGGTGCAGCGTTGACCGGCTGTGACAAACGCCGACTGAATGGTCAGATGGACAGCCGCGTCGATATC < 1:16190258/67‑1 AGGTGCAGCGTTGACCGGCTGTGACAAACGCCGACTGAATGGTCAGATGGACAGCCGCGTCGATATC < 1:34771017/67‑1 AGGTGCAGCGTTGACCGGCTGTGACAAACGCCGACTGAATGGTCAGATGGACAGCCGCGTCGATATC < 1:34718959/67‑1 AGGTGCAGCGTTGACCGGCTGTGACAAACGCCGACTGAATGGTCAGATGGACAGCCGCGTCGATATC < 1:33407276/67‑1 AGGTGCAGCGTTGACCGGCTGTGACAAACGCCGACTGAATGGTCAGATGGACAGCCGCGTCGATATC < 1:12878912/67‑1 AGGTGCAGCGTTGACCGGCTGTGACAAACGCCGACTGAATGGTCAGATGGACAGCCGCGTCGATATC < 1:2556296/67‑1 GTGCAGCGTTGACCGGCTGTGACAAACGCCGACTGAATGGTCAGATGGACAGCCGCGTCGATATCCG > 1:10961941/1‑67 TTCAGTCGGCGTTTGTCACAGCCGGTCAACGCTGCACCTGCGCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/1823195‑1823121‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcgcaggTGCAGCGTTGACCGGCTGTGACAAACGCCGACTGAATGGTCAGATGGACAGCCGCGTCGATATCCG > CP009273/1823160‑1823225 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |