| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 399208 = | 205 (0.490) | 10 (0.030) | 6/94 | NT | 5.7% | coding (50/1116 nt) | yaiC | diguanylate cyclase, cellulose regualtor |
| ? | CP009273 | 399297 = | 161 (0.460) | coding (139/1116 nt) | yaiC | diguanylate cyclase, cellulose regualtor | |||||
Only 100 of 379 total aligned reads displayed.
TGGGAAAATTGTTTCTGAATGTTCCCAAAAATAATGAATGATGAAAACTTTTTCAAAAAAGCGGCGGCGCACGGGGAGGAACCTCCTTTAACTCCTCAAAACGAACATCAGCGGTCCGGGCTGCGCTTCGCCCG > CP009273/399141‑399274 | tGGGAAAATTGTTTCTGAATGTTCCCAAAAATAATGAATGATGAAAACTTTTTCAAAAAAgcggcggc < 1:2991846/68‑1 (MQ=255)accagcccggcggcgggtgtgaaaccagcgttgaagcaatcggtaagaacatgccagccaggccaacc < 1:22525795‑M1/1‑1 (MQ=255)accagcccggcggcgggtgtgaaaccagcgttgaagcaatcggtaagaacatgccagccaggccaacc < 1:6705074‑M1/1‑1 (MQ=255)accagcccggcggcgggtgtgaaaccagcgttgaagcaatcggtaagaacatgccagccaggccaacc < 1:30620985‑M1/1‑1 (MQ=255) ccagcccggcggcgggtgtgaaaccagcgttgaagcaatcggtaagaacatgccagccaggccaacc < 1:12962587‑M1/1‑1 (MQ=255) cagcccggcggcgggtgtgaaaccagcgttgaagcaatcggtaagaacatgccagccaggccaacCGc > 1:19168945‑M1/66‑68 (MQ=255) cagcccggcggcgggtgtgaaaccagcgttgaagcaatcggtaagaacatgccagccaggccaacCGc > 1:33871659‑M1/66‑68 (MQ=255) cagcccggcggcgggtgtgaaaccagcgttgaagcaatcggtaagaacatgccagccaggccaacCGc > 1:30864550‑M1/66‑68 (MQ=255) cccggcggcgggtgtgaaaccagcgttgaagcaatcggtaagaacatgccagccaggccaacCGCACg < 1:33140514‑M1/6‑1 (MQ=255) cccggcggcgggtgtgaaaccagcgttgaagcaatcggtaagaacatgccagccaggccaacCGCACg < 1:1924864‑M1/6‑1 (MQ=255) cccggccgcgggtgtgaaaccagcgttgaagcaatcggtaagaacatgccagccaggccaacCGCACg < 1:31816815‑M1/6‑1 (MQ=255) aaaTTGTTTCTGAATGTTCCCAAAAATAATGAATGATGAAAACTTTTTCAAAAAAGCGGCGGCGCACg < 1:16335270/68‑1 (MQ=255) ccggcggcgggtgtgaaaccagcgttgaagcaatcggtaagaacatgccagcccggccaacCGCACgg > 1:25367409‑M1/62‑68 (MQ=255) ccggcggcgggtgtgaaaccagcgttgaagcaatcggtaagaacatgccagccaggccaacCGCACgg > 1:17783442‑M1/62‑68 (MQ=255) ccggcggcgggtgtgaaaccagcgttgaagcaatcggtaagaacatgccagccaggccaacCGCACgg > 1:27479651‑M1/62‑68 (MQ=255) ccggcggcgggtgtgaaaccagcgttgaagcaatcggtaagaacatgccagccaggccaacCGCACgg > 1:22713135‑M1/62‑68 (MQ=255) ccggcggcgggtgtgaaaccagcgttgaagcaatcggtaagaacatgccagccaggccaacCGCACgg > 1:10359172‑M1/62‑68 (MQ=255) ccggcggcgggtgtgaaaccagcgttgaagcaatcggtaagaacatgccagccaggccaacCGCACgg > 1:14005722‑M1/62‑68 (MQ=255) ccggcggcgggtgtgaaaccagcgttgaagcaatcggtaagaacatgccagccaggccaacCGCACgg > 1:34649292‑M1/62‑68 (MQ=255) ccggcggcgggtgtgaaaccagcgttgaagcaatcggtaagaacatgccagccaggccaacCGCACgg > 1:1152835‑M1/62‑68 (MQ=255) ccggcggcgggtgtgaaaccagcgttgaagcaatcggtaagaacatgcaagccaggccaacCGCACgg < 1:34359126‑M1/7‑1 (MQ=255) cggcggcgggtgtgaaaccagcgttgaagcaatcggtaagaacatgccagccaggccagcCGCACggg > 1:29043365‑M1/61‑68 (MQ=255) cggcggcgggtgtgaaaccagcgttgaagcaatcggtaagaacatgccagccaggccaacCGCACggg > 1:25503963‑M1/61‑68 (MQ=255) cggcggcgggtgtgaaaccagcgttgaagcaatcggtaagaacatgccagccaggccaacCGCACggg > 1:31181541‑M1/61‑68 (MQ=255) cggcggcgggtgtgaaaccagcgttgaagcaatcggtaagaacatgccagccaggccaacCGCACggg > 1:9157616‑M1/61‑68 (MQ=255) cggcggcgggtgtgaaaccagcgttgaagcaatcggtaagaacatgccagccaggccaacCGCACggg > 1:23416822‑M1/61‑68 (MQ=255) cggcggcgggtgtgaaaccagcgttgaagcaatcggtaagaacatgccagccaggccaacCGCACggg > 1:25075199‑M1/61‑68 (MQ=255) cggcggcgggtgtgaaaccagcgttgaagcaatcggtaagaacatgccagccaggccaacCGCACggg > 1:8255866‑M1/61‑68 (MQ=255) cggcggcgggtgtgaaaccagcgttgaagcaatcggtaagaacatgccagccaggccaacCGCACggg > 1:7193708‑M1/61‑68 (MQ=255) cggcggcgggtgtgaaaccagcgttgaagcaatcggtaagaacatgccagccaggccaacCGCACggg > 1:10082003‑M1/61‑68 (MQ=255) cggcggcgggtgtgaaaccagcgttgaagcaatcggtaagaacatgccagccaggccaacCGCACggg > 1:27112364‑M1/61‑68 (MQ=255) cggcggcgggtgtgaaaccagcgttgaagcaatcggtaagaacatgccagccaggccaacCGCACggg > 1:544262‑M1/61‑68 (MQ=255) cggcggcgggtgtgaaaccagcgttgaagcaatcggtaagaacatgccagccaggccaacCGCACggg > 1:27959508‑M1/61‑68 (MQ=255) cggcggcgggtgtgaaaccagcgttgaagcaatcggtaagaacatgccagccaggccaacCGCACggg > 1:29517159‑M1/61‑68 (MQ=255) cggcggcgggtgtgaaaccagcgttgaagcaatcggtaagaacatgccagccaggccaacCGCACggg > 1:4623452‑M1/61‑68 (MQ=255) cggcggcgggtgtgaaaccagcgttgaagcaatcggtaagaacatgccagccaggccaacCGCACggg > 1:10650433‑M1/61‑68 (MQ=255) cggcggcgggtgtgaaaccagcgttgaagcaatcggtaagaacatgccagccaggccaacCGCACggg > 1:13265447‑M1/61‑68 (MQ=255) cggcggcgggtgtgaaaccagcgttgaagcaatcggtaagaacatgccagccaggccaacCGCACggg > 1:12770937‑M1/61‑68 (MQ=255) cggcggcgggtgtgaaaccagcgttgaagcaatcggtaagaacatgccagccaggccaacCGCACggg > 1:16922598‑M1/61‑68 (MQ=255) cggcggcgggtgtgaaaccagcgttgaagcaatcggtaagaacatgccagccaggccaacCGCACggg > 1:12263508‑M1/61‑68 (MQ=255) cggcggcgggtgtgaaaccagcgttgaagcaatcggtaagaacatgccagccaggccaacCGCACggg > 1:11724134‑M1/61‑68 (MQ=255) cggcggcgggtgtgaaaccagcgttgaagcaatcggtaagaacatgccagccaggccaacCGCACggg > 1:18598277‑M1/61‑68 (MQ=255) cggcggcgggtgtgaaaccagcgttgaagcaatcggtaagaacatgccagccaggccaacCGCACggg > 1:18776295‑M1/61‑68 (MQ=255) cggcggcgggtgtgaaaccagcgttgaaacaatcggtaagaacatgccaaccaggccaacCGCACggg > 1:23902293‑M1/61‑68 (MQ=255) aTTGTTTCTGAATGTTCCCAAAAATAATGAATGATGAAAACTTTTTCAAAAAAGCGGCGGCGCACggg < 1:11303879/68‑1 (MQ=255) aTTGTTTCTGAATGTTCCCAAAAATAATGAATGATGAAAACTTTTTCAAAAAAGCGGCGGCGCACggg < 1:4443459/68‑1 (MQ=255) aTTGTTTCTGAATGTTCCCAAAAATAATGAATGATGAAAACTTTTTCAAAAAAGCGGCGGCGCACggg < 1:32859694/68‑1 (MQ=255) aTTGTTTCTGAATGTTCCCAAAAATAATGAATGATGAAAACTTTTTCAAAAAAGCGGCGGCGCACggg < 1:15979186/68‑1 (MQ=255) aTTGTTTCTGAATGTTCCCAAAAATAATGAATGATGAAAACTTTTTCAAAAAAGCGGCGGCGCACggg < 1:18046576/68‑1 (MQ=255) aTTGTTTCTGAATGTTCCCAAAAATAATGAATGATGAAAACTTTTTCAAAAAAGCGGCGGCGCACggg < 1:18467307/68‑1 (MQ=255) aTTGTTTCTGAATGTTCCCAAAAATAATGAATGATGAAAACTTTTTCAAAAAAGCGGCGGCGCACggg < 1:7406770/68‑1 (MQ=255) ggcggcgggtgtgaaaccagcgttgaagcaatcggtaagaacatgccagccaggccaacCGCACgggg > 1:17373014‑M1/60‑68 (MQ=255) aaTGTTCCCAAAAATAATGAATGATGAAAACTTTTTCAAAAAAGCGGCGGCGCACGGGGAGGAAcct > 1:1497568/1‑67 (MQ=255) aTGTTCCCCAAAATAATGAATGATGAAAACTTTTTCAAAAAAGCGGCGGCGCACGGGGAGGAAcctc < 1:6363441/67‑1 (MQ=255) aTGTTCCCAAAAATAATGAATGATGAAAACTTTTTCAAAAAAGCGGCGGCGCACGGGGAGGAAcctcc < 1:24676079/68‑1 (MQ=255) aTGTTCCCAAAAATAATGAATGATGAAAACTTTTTCAAAAAAGCGGCGGCGCACGGGGAGGAAcctcc < 1:19988559/68‑1 (MQ=255) aTGTTCCCAAAAATAATGAATGATGAAAACTTTTTCAAAAAAGCGGCGGCGCACGGGGAGGAAcctcc < 1:18304028/68‑1 (MQ=255) aTGTTCCCAAAAATAATGAATGATGAAAACTTTTTCAAAAAAGCGGCGGCGCACGGGGAGGAAcctcc < 1:22269960/68‑1 (MQ=255) aTGTTCCCAAAAATAATGAATGATGAAAACTTTTTCAAAAAAGCGGCGGCGCACGGGGAGGAAcctcc < 1:214169/68‑1 (MQ=255) aTGTTCCCAAAAATAATGAATGATGAAAACTTTTTCAAAAAAGCGGCGGCGCACGGGGAGGAAcctc < 1:25431021/67‑1 (MQ=255) aTGTTCCCAAAAATAATGAATGATGAAAACTTTTTCAAAAAAGCGGCGGCGCACGGGGAGGAAcctc < 1:23653511/67‑1 (MQ=255) aTGTTCCCAAAAATAATGAATGATGAAAACTTTTTCAAAAAAGCGGCGGCGCACGGGGAGGAAcctc < 1:15299705/67‑1 (MQ=255) aTGTTCCCAAAAATAATGAATGATGAAAACTTTTTCAAAAAAGCGGCGGCGCACGGGGAGGAAcctc < 1:3729160/67‑1 (MQ=255) aTGTTCCCAAAAATAATGAATGATGAAAACTTTTTCAAAAAAGCGGCGGCGCACGGGGAGGAAcctc < 1:5018656/67‑1 (MQ=255) aTGTTCCCAAAAATAATGAATGATGAAAACTTTTTCAAAAAAGCGGCGGCGCACGGGGAGGAAcctc < 1:29652613/67‑1 (MQ=255) aTGTTCCCAAAAATAATGAATGATGAAAACTTTTTCAAAAAAGCGGCGGCGCACGGGGAGGAAcctc < 1:6994203/67‑1 (MQ=255) aTGTTCCCAAAAATAATGAATGATGAAAACTTTTTCAAAAAAGCGGCGGCGCACGGGGAGGAAcctc < 1:25838186/67‑1 (MQ=255) aTGTTCCCAAAAATAATGAATGATGAAAACTTTTTCAAAAAAGCGGCGGCGCACGGGGAGGAAcctc < 1:27171852/67‑1 (MQ=255) tGTTCCCAAAAATAATGAATGATGAAAACTTTTTCAAAAAAGCGGCGGCGCACGGGGAGGAAcctcct < 1:5667331/68‑1 (MQ=255) tGTTCCCAAAAATAATGAATGATGAAAACTTTTTCAAAAAAGCGGCGGCGCACGGGGAGGAAcctcct > 1:2120764/1‑68 (MQ=255) tGTTCCCAAAAATAATGAATGATGAAAACTTTTTCAAAAAAGCGGCGGCGCACGGGGAGGAAcctcct < 1:6061844/68‑1 (MQ=255) tGTTCCCAAAAATAATGAATGATGAAAACTTTTTCAAAAAAGCGGCGGCGCACGGGGAGGAAcctcct < 1:19533195/68‑1 (MQ=255) tGTTCCCAAAAATAATGAATGATGAAAACTTTTTCAAAAAAGCGGCGGCGCACGGGGAGGAAcctcct < 1:32216482/68‑1 (MQ=255) tGTTCCCAAAAATAATGAATGATGAAAACTTTTTCAAAAAAGCGGCGGCGCACGGGGAGGAAcctcct < 1:26340348/68‑1 (MQ=255) cccAAAAATAATGAATGATGAAAACTTTTTCAAAAAAGCGGCGGCGCACGGGGAGGAACCTCCTTTa > 1:8993999/1‑67 (MQ=255) ataatGAATGATGAAAACTTTTTCAAAAAAGCGGCGGCGCACGGGGAGGAACCTCCTTTAACTCCTCa > 1:26567040/1‑68 (MQ=255) aatgaatgATGAAAACTTTTTCAAAAAAGCGGCGGCGCACGGGGAGGAACCTCCTTTAACTCCTCaaa > 1:10980606/1‑68 (MQ=255) tgaatgaTGAAAACTTTTTCAAAAAAGCGGCGGCGCACGGGGAGGAACCTCCTTTAACTCCTCAAAAc < 1:21823815/68‑1 (MQ=255) tgaatgaTGAAAACTTTTTCAAAAAAGCGGCGGCGCACGGGGAGGAACCTCCTTTAACTCCTCAAAAc > 1:17481620/1‑68 (MQ=255) atgatgAAAACTTTTTCAAAAAAGCGGCGGCGCACGGGGAGGAACCTCCTTTAACTCCTCAAAACGaa < 1:9627494/68‑1 (MQ=255) atgatgAAAACTTTTTCAAAAAAGCGGCGGCGCACGGGGAGGAACCTCCTTTAACTCCTCAAAACGa < 1:30546176/67‑1 (MQ=255) gatgaAAACTTTTTCAAAAAAGCGGCGGCGCACGGGGAGGAACCTCCTTTAACTCCTCAAAACGAACa < 1:1728708/68‑1 (MQ=255) aaaCTTTTTCAAAAAAGCGGCGGCGCACGGGGAGGAACCTCCTTTAACTCCTCAAAACGAACATCAGc < 1:33437474/68‑1 (MQ=255) aCTTTTTCAAAAAAGCGGCGGCGCACGGGGAGGAACCTCCTTTAACTCCTCAAAACGAACATCAGCgg < 1:32591991/68‑1 (MQ=255) aCTTTTTCAAAAAAGCGGCGGCGCACGGGGAGGAACCTCCTTTAACTCCTCAAAACGAACATCAGCgg > 1:20890138/1‑68 (MQ=255) aCTTTTTCAAAAAAGCGGCGGCGCACGGGGAGGAACCTCCTTTAACTCCTCAAAACGAACATCAGCgg < 1:6206073/68‑1 (MQ=255) aCTTTTTCAAAAAAGCGGCGGCGCACGGGGAGGAACCTCCTTTAACTCCTCAAAACGAACATCAGCgg < 1:28423492/68‑1 (MQ=255) aCTTTTTCAAAAAAGCGGCGGCGCACGGGGAGGAACCTCCTTTAACTCCTCAAAACGAACATCAGCgg < 1:34180140/68‑1 (MQ=255) aCTTTTTCAAAAAAGCGGCGGCGCACGGGGAGGAACCTCCTTTAACTCCTCAAAACGAACATCAGCgg < 1:24322437/68‑1 (MQ=255) cTTTTTCAAAAAAGCGGCGGCGCACGGGGAGGAACCTCCTTTAACTCCTCAAAACGAACATCAGCGGt < 1:7553745/68‑1 (MQ=255) acatgccagccaggccaacCGCACGGGGAGGAACCTCCTTTAACTCCTCAAAACGAACATCAGCgg > 1:23516093‑M1/20‑66 (MQ=255) catgccagccaggccaacCGCACGGGGAGGAACCTCCTTCCACTCCTCAAAACGAACATCAGCGGTcc < 1:18983068‑M1/50‑1 (MQ=255) ttCAAAAAAGCGGCGGCGCACGGGGAGGAACCTCCTTTAACTCCTCAAAACGAACATCAGCGGTCCgg < 1:7774752/68‑1 (MQ=255) aaaGCGGCGGCGCACGGGGAGGAACCTCCTTTAACTCCTCAAAACGAACATCAGCGGTCCGGGCTgcg < 1:2918590/68‑1 (MQ=255) aaaGCGGCGGCGCACGGGGAGGAACCTCCTTTAACTCCTCAAAACGAACATCAGCGGTCCGGGCTgcg < 1:15495523/68‑1 (MQ=255) aaaGCGGCGGCGCACGGGGAGGAACCTCCTTTAACTCCTCAAAACGAACATCAGCGGTCCGGGCTgcg < 1:9850788/68‑1 (MQ=255) caggccaacCGCACGGGGAGGAACCTCCTTTAACTCCTCAAAACGAACATCAGCGGTCCGGGCTgcgc > 1:22888659‑M1/10‑68 (MQ=255) aaGCGGCGGCGCACGGGGAGGAACCTCCTTTAACTCCTCAAAACGAACATCAGCGGTCCGGGCTgcgc < 1:21557756/68‑1 (MQ=255) CGCACGGGGAGGAACCTCCTTTAACTCCTCAAAACGAACATCAGCGGTCCGGGCTGCGCTTCGCCCg > 1:8657347‑M1/1‑67 (MQ=255) CGCACGGGGAGGAACCTCCTTTAACTCCTCAAAACGAACATCAGCGGGCCGGGCTGCGCTTCGCCCg > 1:32295926‑M1/1‑67 (MQ=255) | TGGGAAAATTGTTTCTGAATGTTCCCAAAAATAATGAATGATGAAAACTTTTTCAAAAAAGCGGCGGCGCACGGGGAGGAACCTCCTTTAACTCCTCAAAACGAACATCAGCGGTCCGGGCTGCGCTTCGCCCG > CP009273/399141‑399274 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |