| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 442683 | 374 (0.900) | 25 (0.070) | 12/90 | NT | 6.3% | coding (479/891 nt) | cyoE | protoheme IX farnesyltransferase |
| ? | CP009273 | = 442722 | 441 (1.320) | coding (440/891 nt) | cyoE | protoheme IX farnesyltransferase | |||||
Only 100 of 792 total aligned reads displayed.
AATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGAACCAA > CP009273/442616‑442749 | tagcctgtacatgaaacgccacgctgtctacggcacgttgattggttcgctctccggCGCTGcgccgc > 1:13984725‑M1/58‑68 (MQ=255) aTGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCt < 1:29570567/68‑1 (MQ=255) aTGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCt < 1:10600015/68‑1 (MQ=255) aTGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCt < 1:6524586/68‑1 (MQ=255) ggCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTa > 1:34728169/1‑67 (MQ=255) ggCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTAt < 1:27164903/68‑1 (MQ=255) tAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCAcc < 1:4167898/68‑1 (MQ=255) ggAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCgg > 1:793241/1‑68 (MQ=255) ggAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCgg > 1:14202289/1‑68 (MQ=255) gAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGt > 1:28371078/1‑68 (MQ=255) aGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGtt > 1:27914245/1‑68 (MQ=255) aGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGtt > 1:4469265/1‑68 (MQ=255) aGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGtt > 1:20758542/1‑68 (MQ=255) aGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGtt > 1:26368094/1‑68 (MQ=255) aGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGtt > 1:23525460/1‑68 (MQ=255) aGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGtt > 1:18567593/1‑68 (MQ=255) aGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGtt > 1:15027383/1‑68 (MQ=255) aGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGtt > 1:8810841/1‑68 (MQ=255) aGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGtt > 1:28611164/1‑68 (MQ=255) aGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGt < 1:31475865/67‑1 (MQ=255) aGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGAGCGCTGCGCCGCTATCGAACTCACCGGtt > 1:23903826/1‑68 (MQ=255) gggAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGtt < 1:13703834/65‑1 (MQ=255) gTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGtt < 1:13168796/67‑1 (MQ=255) gAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTAcc < 1:19409215/68‑1 (MQ=255) gAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTAcc < 1:27562587/68‑1 (MQ=255) gAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTAcc < 1:26064481/68‑1 (MQ=255) ggCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCACCGCCGCTATCGAACTCACCGGTTACCGc > 1:6228611/1‑68 (MQ=255) gCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGc > 1:5418150/1‑67 (MQ=255) gCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGc > 1:33875240/1‑67 (MQ=255) cATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGca < 1:5967587/67‑1 (MQ=255) aTCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTGCCGcaga > 1:11175635/1‑66 (MQ=255) aTCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGcac < 1:25294554/67‑1 (MQ=255) cTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGt < 1:3568250/68‑1 (MQ=255) cTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGt < 1:33284494/68‑1 (MQ=255) cTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGt < 1:32249666/68‑1 (MQ=255) cTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGt < 1:1226175/68‑1 (MQ=255) cTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGt < 1:20051209/68‑1 (MQ=255) cTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGt < 1:16349139/68‑1 (MQ=255) cTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGt < 1:15683807/68‑1 (MQ=255) tGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTa < 1:31638092/68‑1 (MQ=255) gCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTa > 1:14416282/1‑67 (MQ=255) cacaGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGcc < 1:18273130/68‑1 (MQ=255) cacaGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGcc > 1:5213029/1‑68 (MQ=255) cacaGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGc < 1:25934543/67‑1 (MQ=255) cacaGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGc < 1:3069067/67‑1 (MQ=255) gcacgttgattggttcgctctccggCGCTGCGCCGGTATCGAACTCGCCGGTTTCCGGAGAGTAGCCg < 1:2200593‑M1/43‑1 (MQ=255) gcacgttgattggttcgctctccggCGCTGCGCCGCGGTCGGACTCACCGGTTACCGGACAGTAGCCg < 1:2148105‑M1/43‑1 (MQ=255) gcacgttgattggttcgctctccggCGCGGCGCCGCTATCGGGCTCCCCGGTTACCGGCCAGTAGCCg < 1:16944887‑M1/43‑1 (MQ=255) gcacgttgatcggttcgctctccggCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCg < 1:10005180‑M1/43‑1 (MQ=255) acaGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCg > 1:31104930/1‑68 (MQ=255) acaGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCg > 1:4765364/1‑68 (MQ=255) acaGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCg > 1:17132348/1‑68 (MQ=255) acaGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCg > 1:16803697/1‑68 (MQ=255) acaGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCg > 1:10424471/1‑68 (MQ=255) aGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGa > 1:22546774/1‑67 (MQ=255) aGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGa > 1:11420941/1‑67 (MQ=255) gCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATc > 1:2478118/1‑67 (MQ=255) gCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATc > 1:3241368/1‑67 (MQ=255) gCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATc > 1:27706680/1‑67 (MQ=255) gattggttcgctctccggCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGGAGCCGATCACcg < 1:34390880‑M1/50‑1 (MQ=255) aGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGgc > 1:33718212‑M2/1‑66 (MQ=255) gATAGCCAGCAGGATCGCTGCGCCGCcggtgatcggctactgtgcggtaaccggtgagtacgatagcg > 1:2940629‑M1/1‑26 (MQ=255) gATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGgcg < 1:7679851‑M2/68‑4 (MQ=255) aTAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGgcg < 1:26439477‑M2/67‑4 (MQ=255) tAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGgcggc > 1:23144875‑M2/1‑63 (MQ=255) tagctctccggCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGGCGgcgc < 1:30348053‑M1/57‑1 (MQ=255) gctctccggCGCTGCGCCGCTATCGAACTCACCGGTTACCGCCCAGTAGCCGATCACCGGCGGCGCa < 1:9652666‑M1/58‑1 (MQ=255) agcagGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGgcggcgcagc < 1:2549768‑M2/68‑11 (MQ=255) cagGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGgcggcgcagcg < 1:7341996‑M2/67‑12 (MQ=255) agGATCGCTGCGCCGCcggtgatcggcgactgtgcggtaaacggtgagttagatagcggcgcagcga > 1:19044478‑M1/1‑16 (MQ=255) agGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGgcggcgcagc > 1:14734284‑M2/1‑55 (MQ=255) agGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGgcggcgcagc > 1:33476709‑M2/1‑55 (MQ=255) agGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGgcggcgcagc > 1:22962991‑M2/1‑55 (MQ=255) agGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAgcgc < 1:20535875/67‑1 (MQ=255) agGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGcc > 1:25060673/1‑68 (MQ=255) agGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGcc > 1:29840241/1‑68 (MQ=255) aTCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGcc < 1:32830757/65‑1 (MQ=255) aTCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGga > 1:8460217/1‑68 (MQ=255) CGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGgaga > 1:5827602‑M1/1‑68 (MQ=255) gCTGCGCCGCcggtgatcggctactgtgcggtaaccggtgagttcgatagcggcgcagcgatcctgct < 1:28154709‑M1/68‑59 (MQ=255) gCTGCGCCGCcggtgatcggctactgtgcggtaaccggtgagttcgatagcggcgcagcgatcct > 1:29193919‑M1/1‑10 (MQ=255) gCTGCGCCGCcggtgatcggctactgtgcggtaaccggtgagttcgatagcggcgcagcgatcct > 1:17844539‑M1/1‑10 (MQ=255) gCTGCGCCGCcggtgatcggctactgtgcggtaaccggtgagttcgatagcggcgcagcgatcct > 1:911239‑M1/1‑10 (MQ=255) gCTGCGCCGCcggtgatcggctactgtgcggtaaccggtgagttcgatagcggcgcagcgatcct > 1:3841712‑M1/1‑10 (MQ=255) gCTGCGCCGCcggtgatcggctactgtgcggtaaccggtgagttcgatagcggcgcagcgatcct > 1:24213647‑M1/1‑10 (MQ=255) GCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGgaga < 1:8170219‑M1/67‑1 (MQ=255) TGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGGAGAGCg < 1:22252645‑M1/68‑1 (MQ=255) TGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGGAGAGCg < 1:26846783‑M1/68‑1 (MQ=255) gcgcCGCcggtgatcggctactgtgcggttaccggtgagttcgatagcggcgcagcgatcctgctggc < 1:2182817‑M1/68‑62 (MQ=255) gcgcCGCcggtgatcggctactgtgcggtaaccggtgagttcgatagcggcgcagcgatcctgctggc < 1:10184870‑M1/68‑62 (MQ=255) cgccggtgatcggctactgtgcggtaaccggtgagttcgatagctgcgcagcgatcctgctggctatc < 1:13536312‑M1/68‑66 (MQ=255) cgccggtgatcggctactgtgcggtaaccggtgagttcgatagcggcgcagcgatcctgctggctatc < 1:6987260‑M1/68‑66 (MQ=255) cgccggtgatcggctactgtgcggtaaccggtgagttcgatagcggcgcagcgatcctgctggctatc < 1:18717091‑M1/68‑66 (MQ=255) cgccggtgatcggctactgtgcggtaaccggtgagttcgatagcggcgcagcgatcctgctggctatc < 1:24677654‑M1/68‑66 (MQ=255) cgccggtgatcggctactgtgcggtaaccggtgagttcgatagcggcgcagcgatcctgctggctat < 1:4933786‑M1/67‑65 (MQ=255) cgcTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGgcggcgcagcgatcctgctggctatc > 1:11720909‑M2/1‑42 (MQ=255) CGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGAAcc > 1:14613985‑M1/1‑67 (MQ=255) CGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGAACCa > 1:12765980‑M1/1‑68 (MQ=255) CGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGAACCa > 1:17367311‑M1/1‑68 (MQ=255) gccggtgatcggctactgtgcggtaaccggtgagttcgatagcggcgcagcgatcctgctggctatct < 1:12030848‑M1/68‑67 (MQ=255) | AATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGAACCAA > CP009273/442616‑442749 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |