| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 2925176 = | NA (NA) | 6 (0.020) | 5/92 | NT | NA | noncoding (1/30 nt) | REP203 (repetitive extragenic palindromic) element; contains 1 REP sequences | REP203 (repetitive extragenic palindromic) element; contains 1 REP sequences |
| ? | CP009273 | 2925206 = | NA (NA) | intergenic (+37/+18) | ygdG/fucO | Ssb‑binding protein, misidentified as ExoIX/L‑1,2‑propanediol oxidoreductase | |||||
Only 100 of 511 total aligned reads displayed.
CCGCTTACAAACCGATTTGCATATCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAA > CP009273/2925109‑2925243 | cGCTTACAAACCGATTTGCATATCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGc < 1:24114594/68‑1 (MQ=255) cGCTTACAAACCGATTTGCATATCGACGGCAATTAACAGCAATTGCGGTTGGTACGGTAACGGCGAGc < 1:28376608/68‑1 (MQ=255) ttACAAACCGATTTGCATATCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCgg < 1:25946229/68‑1 (MQ=255) gcaacgcttgaggatattgtagagctttaccataccgcctggtaaatgcgctgatgtgataatGCCgg < 1:25653157‑M1/5‑1 (MQ=255) caacgcttgaggatattgtagagatataccatacagcctggtaaatgcgctgatgtgataatGCCGGa < 1:13646119‑M1/6‑1 (MQ=255) aacgcttgaggatattgtagagctttaccataccgcctggtaaatgcgctgatgttataatGCCGGAt < 1:10764182‑M1/7‑1 (MQ=255) aacgcttgaggatattgtagagctttaccataccgcctggtaaatgcgctgatgtgataatGCCGGAt < 1:4353916‑M1/7‑1 (MQ=255) aaaCCGATTTGCATATCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCCGATa > 1:30679027/1‑67 (MQ=255) gcttgaggatattgtagagctttaccataccgcctggtaaatgcgctgatgtgataatGCCGGATAcg < 1:19228210‑M1/10‑1 (MQ=255) gcttgaggatattgtagagctttaccataccgcctggtaaatgcgctgatgtgataatGCCGGATAcg < 1:7132386‑M1/10‑1 (MQ=255) aCCGATTTGCATATCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGCTAcg > 1:19737770/1‑67 (MQ=255) aCCGATTTGCATATCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATAcg > 1:2190059/1‑67 (MQ=255) aCCGATTTGCATATCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATAcg > 1:28737275/1‑67 (MQ=255) aCCGATTTGCATATCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATAcg > 1:12159878/1‑67 (MQ=255) aCCGATTTGCATATCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATAcg > 1:5880095/1‑67 (MQ=255) aCCGATTTGCATATCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATAcg > 1:16999815/1‑67 (MQ=255) aCCGATTTGCATATCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCCGATaag > 1:15982220/1‑65 (MQ=255) aCCGATTTGCATATCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCCGATAcg > 1:21623491/1‑67 (MQ=255) cGATTTGCATATCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATAcgccg < 1:18667574/68‑1 (MQ=255) tGCATATCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAAc < 1:17456676/68‑1 (MQ=255) atatCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAAcgtc > 1:15228283/1‑68 (MQ=255) atCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAAcgtcgt < 1:21081296/68‑1 (MQ=255) atCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAAcgtcgg > 1:23351377/1‑67 (MQ=255) cGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCCGATACGCCGCAAACGTCGTa > 1:14585355/1‑67 (MQ=255) cGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATcc < 1:4885144/67‑1 (MQ=255) cGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCg < 1:24302148/68‑1 (MQ=255) cGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCg > 1:3204659/1‑68 (MQ=255) cAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGc < 1:5545297/67‑1 (MQ=255) taccataccgcctggtaaatgcgctgatgtgataatGCCGGATAcg > 1:30073051‑M1/37‑46 (MQ=255) aaTTTACAGCAATTGCGGTTGGTACGGTAACTGCGAGCCGGATACGGCGCAAACGTCGTATCCGGCa < 1:14024175/67‑1 (MQ=255) aaTTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCa < 1:31852406/67‑1 (MQ=255) aaTTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCa < 1:4004322/67‑1 (MQ=255) aTTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGctcg < 1:10013044/68‑4 (MQ=255) tttACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTa < 1:1953543/68‑1 (MQ=255) tttACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTa < 1:26251805/68‑1 (MQ=255) tttACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTa < 1:8356816/68‑1 (MQ=255) tttACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTa < 1:1101077/68‑1 (MQ=255) tttACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTa < 1:32675774/68‑1 (MQ=255) tttACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTa < 1:4653140/68‑1 (MQ=255) ttACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTTTACGGCATTa > 1:9194821/1‑67 (MQ=255) aCAGCAATTGCGGTTGGTACGGTAACGGCGAGCCCGAAACCCCCCAAACCACGTATCAGCCATTTTc > 1:20335292/1‑67 (MQ=255) gCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACAt > 1:6815836/1‑68 (MQ=255) cgcctggtaaatgcgctgatgtgataatGCCGGATACGCCGCAAACGTCGTATCCGGCATTATcaca < 1:19133180‑M1/39‑1 (MQ=255) cAATTGCGGTTGGTACGGTAACGGCGAGCCCGCTAAGCCGCAAACGTGGTTTACGGCCATTTCACAta > 1:9011641/1‑67 (MQ=255) aaTTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATcaca < 1:2764177/65‑1 (MQ=255) aaTTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATc < 1:32875855/67‑1 (MQ=255) aaTTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATc < 1:14251767/67‑1 (MQ=255) aaTTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGGATCCGGCATTATAACAtaa > 1:22280268/1‑66 (MQ=255) aaTTGCGGTTGGTACGGTAACGGCGAGCCCGATACGCCGCAAACCTGGTAACCGGCATTTTAACATc > 1:2976776/1‑67 (MQ=255) aaTTGCGGTTGGTACGGTAACGGCGAGCCCGATAAGCCGCAAACGTCGTATACGGCATTATAACAtaa > 1:14822823/1‑66 (MQ=255) tGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAgcg < 1:12759783/68‑1 (MQ=255) tGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAgcg < 1:28096753/68‑1 (MQ=255) tGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAgc > 1:31190064/1‑67 (MQ=255) tGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATAACATCAgc > 1:7552012/1‑67 (MQ=255) gCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAgcgc < 1:17847472/68‑1 (MQ=255) cGGTTGGTACGGTAACGGCGAGCCGGATAAGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCa > 1:12481410/1‑68 (MQ=255) ggTTGGTACGGTAACGGCGAGCCGGAAACGCCGCAAACGTCGTATCCGGCATTATAACATCAGCGCAt > 1:21366452/1‑68 (MQ=255) ggTTGGTACGGTAACGGCGAGCCCGATACCCCCCAAACGGACTAACCCGGATTATAACATAAGCGCaa > 1:18407449/1‑67 (MQ=255) ggTTGGTACGGTAACGGCGAGCCCGATAAGCCGCAAAACTCGTTTACCGCCTTTTGACATCAGCGCAt > 1:31692953/1‑68 (MQ=255) ggTTGGTACGGTAACGGCGAGCCCGATAACCCGCAAAACTCGTATACGGCCATATAACAAAAGCGCaa > 1:15008002/1‑67 (MQ=255) ttGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCAttt > 1:7907042/1‑68 (MQ=255) ttGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCAtt < 1:3454969/67‑1 (MQ=255) tGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCAttt < 1:24882161/67‑1 (MQ=255) tGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATACGGCATTATCACATCAGCGCATTTa < 1:26982550/68‑1 (MQ=255) tACGGTAACGGCGAGCCCGATACCCCGCAAACGTCGTATACGGCATTATAACATCAGCGCATTTACCa > 1:18164418/1‑68 (MQ=255) aCGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAg < 1:20759284/68‑1 (MQ=255) ggTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGc < 1:27197308/68‑1 (MQ=255) gTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCCTTTAACAGGCg > 1:3082335/1‑68 (MQ=255) gTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCg > 1:33492783/1‑68 (MQ=255) aaCGGCGTGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:16490003/68‑1 (MQ=255) aaCGGCGAGCCGTATACGCCGCAAACGTCGTATCCGGCATTAGCACATCAGCGCATTTACCAGGCGGt < 1:17613571/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATGCGGCATTTTCACATCAGCGCATTTTACAGGCGGt > 1:30169511/1‑68 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATTACATCAGCGCATTTACCAGGCGGt > 1:17200358/1‑68 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:15629758/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:23604333/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:8567324/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:18878222/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:11711939/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:515050/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:22533424/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:23046180/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:9412668/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt > 1:33333847/1‑68 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:3050713/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:31362422/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:29132467/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:32326274/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:27471349/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:33704591/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:25415359/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt > 1:3501667/1‑68 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:3720167/68‑1 (MQ=255) ggCGAGCCGGATACGCCGCAAACGTGGTATCCGGGATTATGACATCAGCGCATTTACCAGGCGGTATg > 1:33971155/1‑68 (MQ=255) ggCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATg < 1:23866512/68‑1 (MQ=255) ggCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATg < 1:8098675/68‑1 (MQ=255) ggCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATg < 1:29300054/68‑1 (MQ=255) taatGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATgg < 1:6284521‑M1/64‑1 (MQ=255) taatGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATgg < 1:5995565‑M1/64‑1 (MQ=255) cGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGt > 1:34299804/1‑68 (MQ=255) cGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGGATGGt > 1:12973805/1‑68 (MQ=255) | CCGCTTACAAACCGATTTGCATATCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAA > CP009273/2925109‑2925243 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |