| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 3999175 = | 361 (0.870) | 22 (0.060) | 11/96 | NT | 6.7% | intergenic (+84/‑49) | pldA/recQ | outer membrane phospholipase A/ATP‑dependent DNA helicase |
| ? | CP009273 | 3999197 = | 303 (0.850) | intergenic (+106/‑27) | pldA/recQ | outer membrane phospholipase A/ATP‑dependent DNA helicase | |||||
Only 100 of 486 total aligned reads displayed.
CCAGGATTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGAGCTA > CP009273/3999130‑3999263 | ccAGGATTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGt < 1:32820001/68‑1 (MQ=255)ccAGGATTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGt < 1:730273/68‑1 (MQ=255) cAGGATTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGtt < 1:33170352/68‑1 (MQ=255) cAGGATTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGtt < 1:8561255/68‑1 (MQ=255) ggATTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGtttt > 1:21198278/1‑68 (MQ=255) ggATTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGtttt > 1:31562711/1‑68 (MQ=255) ggATTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGtttt > 1:30254420/1‑68 (MQ=255) aTTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTa > 1:10293323/1‑68 (MQ=255) aTTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTa > 1:5973007/1‑68 (MQ=255) aTTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTa > 1:2007099/1‑68 (MQ=255) aTTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTa > 1:19726885/1‑68 (MQ=255) aTTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTa > 1:6730236/1‑68 (MQ=255) aTTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTa > 1:34509457/1‑68 (MQ=255) aTTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTa > 1:34228928/1‑68 (MQ=255) aTTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTa > 1:8292656/1‑68 (MQ=255) aTTACCCTCTCAGAGACTAAAAGCATTCCAGTTTATCGCGCAGGCGCTCAAAATAGCTCCTGTTTTTa > 1:28567890/1‑68 (MQ=255) ttACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTAt < 1:16486185/68‑1 (MQ=255) ttACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTAt < 1:20398454/68‑1 (MQ=255) cccTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTc > 1:29247667/1‑68 (MQ=255) ccTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCa > 1:14540365/1‑68 (MQ=255) ccTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCa > 1:32040924/1‑68 (MQ=255) ccTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCa < 1:22941733/68‑1 (MQ=255) gccacattcaccccgattgcctgaaataaaaacaggcgctattttcagcgcctgTTTTTATTTCAgg < 1:24492770‑M2/13‑1 (MQ=255) cAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCaa > 1:21318585/1‑68 (MQ=255) agagACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGATAATAGCGCGTGTTTTTATTTCAGGCAAt > 1:11474494/1‑68 (MQ=255) agagACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCaa > 1:1856909/1‑67 (MQ=255) agagACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCaa > 1:4935536/1‑67 (MQ=255) agagACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCaa > 1:33898345/1‑67 (MQ=255) agagACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCaa > 1:438412/1‑67 (MQ=255) agagACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCaa > 1:2346274/1‑67 (MQ=255) agagACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCaa > 1:20861258/1‑67 (MQ=255) agaCTAAAAGCATTGCAGTTTCTAGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCg > 1:21802030/1‑68 (MQ=255) ttcaccccgattgcctgaaataaaaaCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCgg < 1:29375303‑M1/42‑1 (MQ=255) gaCTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAAt < 1:29531746/65‑1 (MQ=255) gaCTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAAt < 1:17196554/65‑1 (MQ=255) gaCTAAAAGCATTGCAGTTTCTAGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAAt < 1:24178346/65‑1 (MQ=255) tcaccccgattgcctgaaataaaaacacgcgcaattttcagcgcctgTTTTTATTTCAGGCAATCggg < 1:34370640‑M2/21‑1 (MQ=255) aCTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCggg > 1:27080445/1‑68 (MQ=255) aCTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCggg > 1:31028565/1‑68 (MQ=255) aCTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCggg > 1:31918813/1‑68 (MQ=255) cTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCgggg < 1:22171252/68‑1 (MQ=255) cTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCgggg < 1:25408149/68‑1 (MQ=255) cTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCggg < 1:24083713/67‑1 (MQ=255) cTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCggg < 1:740441/67‑1 (MQ=255) cTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCggg < 1:5416117/67‑1 (MQ=255) cTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCggg < 1:7039004/67‑1 (MQ=255) ccccgattgcctgaaataaaaaCAGGCGCTGAAAATAGCGGCTGTTTTTATTTCAGGCAAGCGGGGTg < 1:33711248‑M1/46‑1 (MQ=255) cccgattgcctgaaataaaaacaggcgctattttcagcgcctgTTTTTATTTCAGGCAATCGGGGTGa < 1:3786272‑M2/25‑1 (MQ=255) cccgattgcctgaaataaaaaCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGa < 1:32415483‑M1/47‑1 (MQ=255) aaaGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGa < 1:30698137/68‑1 (MQ=255) aGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAAt > 1:11853892/1‑68 (MQ=255) aGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAAt < 1:16910409/68‑1 (MQ=255) aGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAAt > 1:408844/1‑68 (MQ=255) aGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAAt > 1:6501331/1‑68 (MQ=255) aGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAAt > 1:1802247/1‑68 (MQ=255) aGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAAt > 1:23183000/1‑68 (MQ=255) gCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAAtg > 1:5673300/1‑68 (MQ=255) gCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAAtg > 1:33448340/1‑68 (MQ=255) gCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAAtg > 1:23663430/1‑68 (MQ=255) gCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGAAATCGGGGTGAAtg > 1:32530126/1‑68 (MQ=255) cATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAAtgt > 1:1994219/1‑68 (MQ=255) ttGCAGTTTCTGGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTgg < 1:15332178/68‑1 (MQ=255) tgcctgaaataaaaaCAGGCGCTGAAAATAGCGCCTGTTTTTATTTGAGGCAATCGGGGTGAAtgtg < 1:23359885‑M1/52‑1 (MQ=255) tGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGgc < 1:26544799/68‑1 (MQ=255) gCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGgc > 1:29640317/1‑67 (MQ=255) gCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGgc > 1:1350094/1‑67 (MQ=255) aGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCa > 1:12452167/1‑68 (MQ=255) aGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTAAATGTGGCGCa > 1:25093555/1‑68 (MQ=255) caaaaaaaaacagccgctattttccgcgcctgTTTTTATTTCAGGCAATCGGGGTTAATGTGGCGCAg < 1:3589870‑M2/36‑1 (MQ=255) ttCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAgg < 1:24846329/67‑1 (MQ=255) ttCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAgg < 1:20538285/67‑1 (MQ=255) ttCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAg < 1:13932253/66‑1 (MQ=255) ttCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAg < 1:17438923/66‑1 (MQ=255) ttCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGc > 1:27234310/1‑68 (MQ=255) ttCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGc > 1:16160841/1‑68 (MQ=255) aaaaacaggcgctatttgccgcccctgTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGa < 1:19054984‑M2/41‑1 (MQ=255) gcgcAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAg > 1:7656060/1‑68 (MQ=255) gcAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAgtg < 1:9301647/68‑1 (MQ=255) gcAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAgtg > 1:10104310/1‑68 (MQ=255) gcAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAgtg < 1:9653267/68‑1 (MQ=255) gcAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAgtg > 1:26838503/1‑68 (MQ=255) gcAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAgtg < 1:22522467/68‑1 (MQ=255) gcAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAgtg < 1:2200999/68‑1 (MQ=255) gcAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAgtg > 1:29917963/1‑68 (MQ=255) AGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAgtgt > 1:27668473‑M1/1‑67 (MQ=255) aaaaTAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTgg > 1:28945563/1‑68 (MQ=255) aaaaTAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTgg > 1:28139927/1‑68 (MQ=255) aaaaTAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTgg > 1:12293812/1‑68 (MQ=255) aTAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAg > 1:14086925/1‑67 (MQ=255) aTAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTCGAg > 1:23812320/1‑67 (MQ=255) tAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGt > 1:28741540/1‑67 (MQ=255) gcgcctgTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCg > 1:17715404‑M2/8‑68 (MQ=255) gcgcctgTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCg > 1:15640718‑M2/8‑68 (MQ=255) gcgcctgTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCg > 1:15001087‑M2/8‑68 (MQ=255) gcgcctgTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCg > 1:12763544‑M2/8‑68 (MQ=255) gcctgTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGa < 1:19391393‑M2/63‑1 (MQ=255) gcctgTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGa < 1:7978775‑M2/63‑1 (MQ=255) ctgTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGAGc < 1:11021477‑M2/65‑1 (MQ=255) ctgTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGAGc < 1:10685972‑M2/65‑1 (MQ=255) ctgGTTTTATTTCCGGCAATCGGGGGGAATGGGGCGCAGGCGGAAGTGTTGAATCTGGCGTCCGGAGc < 1:26299931‑M2/65‑1 (MQ=255) | CCAGGATTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGAGCTA > CP009273/3999130‑3999263 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |