| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 3601535 | 503 (1.130) | 22 (0.050) | 13/102 | NT | 5.3% | coding (1725/2199 nt) | zntA | zinc, cobalt and lead efflux system |
| ? | CP009273 | = 3601575 | 330 (0.810) | coding (1765/2199 nt) | zntA | zinc, cobalt and lead efflux system | |||||
CTTGGTGTCATTGCGTTACAGGATACCCTGCGCGCCGATGCTGCAACTGCCATCAGTGAACTGAACGCGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/3601464‑3601535‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgctgCGCGTGGATTATCGCCGGTGAGGATCACCCCTTTGACGCCCAGCGCGTTCAGTTCACTGATGGCAGT < CP009273/3601575‑3601509 CTTGGTGTCATTGCGTTACAGGATACCCTGCGCGCCGATGCTGCAACTGCCATCAGTGAACTGAACGC > 1:35747492/1‑68 gTGGTGTCATTGCGTTACAGGATACCCTGCGCGCCGATGCTGCAACTGCCATCAGTGAACTGAACGCG < 1:28055736/67‑1 TTGGTGTCATTGCGTTACAGGATACCCTGCGCGCCGATGCTGCAACTGCCATCAGTGAACTGAACGCG < 1:12226210/68‑1 TTGGTGTCATTGCGTTACAGGATACCCTGCGCGCCGATGCTGCAACTGCCATCAGTGAACTGAACGC > 1:17363589/1‑67 TTGGTGTCATTGCGTTACAGGATACCCTGCGCGCCGATGCTGCAACTGCCATCAGTGAACTGAACGC > 1:10202422/1‑67 TTGGTGTCATTGCGTTACAGGATACCCTGCGCGCCGATGCTGCAACTGCCATCAGTGAACTGAACGC < 1:25771070/67‑1 TTGGTGTCATTGCGTTACAGGATACCCTGCGCGCCGATGCTGCAACTGCCATCAGTGAACTGAACGC > 1:27060587/1‑67 TTGGTGTCATTGCGTTACAGGATACCCTGCGCGCCGATGCTGCAACTGCCATCAGTGAACTGAACGC > 1:2496208/1‑67 TTGGTGTCATTGCGTTACAGGATACCCTGCGCGCCGATGCTGCAACTGCCATCAGTGAACTGAACGC > 1:27374340/1‑67 TTGGTGTCATTGCGTTACAGGATACCCTGCGCGCCGATGCTGCAACTGCCATCAGTGAACTGAACGC < 1:28197351/67‑1 TTGGTGTCATTGCGTTACAGGATACCCTGCGCGCCGATGCTGCAACTGCCATCAGTGAACTGAACGC > 1:30828531/1‑67 TTGGTGTCATTGCGTTACAGGATACCCTGCGCGCCGATGCTGCAACTGCCATCAGTGAACTGAACGC > 1:34322778/1‑67 TTGGTGTCATTGCGTTACAGGATACCCTGCGCGCCGATGCTGCAACTGCCATCAGTGAACTGAACGC > 1:8147900/1‑67 TTGGTGTCATTGCGTTACAGGATACCCTGCGCGCCGATGCTGCAACTGCCATCAGTGAACTGAACGC < 1:9976597/67‑1 TTGGTGTCATTGCGTTACAGGATACCCTGCGCGCCGATGCTGCAACTGCCATCAGTGAACTGAACGC > 1:12722104/1‑67 TTGGTGTCATTGCGTTACAGGATACCCTGCGCGCCGATGCTGCAACTGCCATCAGTGAACTGAACGC > 1:13404347/1‑67 TTGGTGTCATTGCGTTACAGGATACCCTGCGCGCCGATGCTGCAACTGCCATCAGTGAACTGAACGC > 1:13530181/1‑67 TTGGTGTCATTGCGTTACAGGATACCCTGCGCGCCGATGCTGCAACTGCCATCAGTGAACTGAACGC < 1:14577243/67‑1 TTGGTGTCATTGCGTTACAGGATACCCTGCGCGCCGATGCTGCAACTGCCATCAGTGAACTGAACGC > 1:8442992/1‑67 TGGTGTCATTGCGTTACAGGATACGCTGCGCGCCGATGCTGCAACTGCCATCAGTGAACTGAACGCG < 1:33525549/67‑1 GGTGTCATTGCGTTACAGGATACCCTGCGCGCCGATGCTGCAACTGCCATCAGTGAACTGAACGCGCT < 1:12381680/68‑1 GGTGTCATTGCGTTACAGGATACCCTGCGCGCCGATGCTGCAACTGCCATCAGTGAACTGAACGC > 1:18148321/1‑65 GGTGTCATTGCGTTACAGGATACCCTGCGCGCCGATGCTGCAACTGCCATCAGTGAACTGAACGC > 1:21418543/1‑65 GGTGTCATTGCGTTACAGGATACCCTGCGCGCCGATGCTGCAACTGCCATCAGTGAACTGAACGC > 1:35010009/1‑65 GGTGTCATTGCGTTACAGGATACCCTGCGCGCCGATGCTGCAACTGCCATCAGTGAACTGAACGC > 1:9338525/1‑65 GGTGTCATTGCGTTACAGGATACCCTGCGCGCCGATGCTGCAACTGCCATCAGTGAACTGAACGC > 1:35142004/1‑65 GTGTCATTGCGTTACAGGATACCCTGCGCGCCGATGCTGCAACTGCCATCAGTGAACTGAACGCGCTG > 1:4778700/1‑68 TGTCATTGCGTTACAGGATACCCTGCGCGCCGATGCTGCAACTGCCATCAGTGAACTGAACGCGCTcg > 1:17502889/1‑66 GTCATTGCGTTACAGGATACCCTGCGCGCCGATGGTGCAACTGCCATCAGTGAACTGAACGCGCcgg > 1:34701507/1‑64 TACCCTGCGCGCCGATGCTGCAACTGCCATCAGTGAACTCAACGCGCTGCGCGTGGATTATCGCCGGT < 1:9040533/68‑1 GCCGATGCTGCAACTGCCATCAGTGAACTGAACGCGCTGCGCGTGGATTATCGCCGGTGAGGATCACC < 1:14662993/68‑1 GCTGCAACTGCCATCAGTGAACTGAACGCGCTGCGCGTGGATTATCGCCGGTGAGGTTCACCCCTTTG > 1:32628185/1‑68 TGCAACTGCCATCAGTGAACTGAACGCGCTGCGCGTGGATTATCGCCGGTGCGGCTCGCCCCTGTGgc > 1:14211224/1‑66 TGCAACTGCCATCAGTGAACTGAACGCGCTGCGCGTGGATTATCGCCGGTGAGGATCACCCCTTTGAC > 1:2618717/1‑68 ACTGCCATCAGTGAACTGAACGCGCTGCGCGTGGATTATCGCCGGTGGGGGTCCCCCCGTTGACGCC > 1:20660560/1‑67 TGCCATCAGTGAACTGAACGCGCTGCGCGTGGATTATCGCCGGTGAGGATCACCCCTTTGACGCCCA > 1:4396826/1‑67 TGCCATCAGTGAACTGAACGCGCTGCGCGTGGATTATCGCCGGTGAGGATCACCCCTTTGACGCCCA > 1:33265343/1‑67 CCATCAGTGAACTGAACGCGCTGCGCGGGGCTTATCGCCGGTGAGGATCGCCCCGTTGACGCCCAGCG > 1:32696918/1‑68 TCAGTGAACTGAACGCGCTGCGCGTGGATTATCGCCGGTGAGGATCACCCCTTTGACGCCCAGCGCGT > 1:36581760/1‑68 TCAGTGAACTGAACGCGCTGCGCGTGGATTATCGCCGGTGAGGATCACCCCTTTGACGCCCAGCGCGT > 1:23483521/1‑68 AGTGAACTGAGCGCGCTGCGCGTGGATTATCGCCGGTGAGGATCACCCCTTTGACGCCCAGCGCGTTC > 1:16888366/1‑68 GTGAACTGAACGCGCTGCGGGTGGCTTATCGCCGGTGAGGATCACCCCTTTGACTCCCAGCGCGTTCA > 1:15448727/1‑68 GTGAACTGAACGCGCTGCGCGTGGATTATCGCCGGTGAGGATCACCCCTTTGACGCCCAGCGCGTTCA > 1:15605681/1‑68 GTGAACTGAACGCGCTGCGCGTGGATTATCGCCGGTGAGGATCACCCCTTTGACGCCCAGCGCGTTCA > 1:17444232/1‑68 GAACTGAACGCGCTGCGCGTGGATTATCGCCGGTGAGGATCACCCCTTTGACGCCCAGCGCGTTCAGT < 1:21829476/68‑1 ACTGAACGCGCTGCGCGTGGATTATCGCCGGTGAGGATCACCCCTTTGACGCCCAGCGCGTTCAGTTC > 1:5109869/1‑68 ACTGAACGCGCTGCGCGTGGATTATCGCCGGTGAGGATCACCCCTTTGACGCCCAGCGCGTTCAGTTC > 1:36539983/1‑68 ACTGAACGCGCTGCGCGTGGATTATCGCCGGTGAGGATCACCCCTTTGACGCCCAGCGCGTTCAGTT > 1:24595242/1‑67 ACTGAACGCGCTGCGCGTGCATAATCGCCGCTGAGGATCACCGCTTTGACGCCCAGCGCGTTCAGTTC > 1:26017674/1‑68 TGAACGCGCTGCGCGTGGATTATCGCCGGTGAGGATCACCCCTTTGACGCCCAGCGCGTTCAGTTC > 1:24009440/1‑66 TGAACGCGCTGCGCGTGGATTATCGCCGGTGAGGATCACCCCTTTGACGCCCAGCGCGTTCAGTTC > 1:16739337/1‑66 GCGCTGCGCGTGGATTATCGCCGGTGAGGATCACCCCTTTGACGCCCAGCGCGTTCAGTTCCCTGATG > 1:35525882/1‑68 CGCTGCGCGTGGATTATCGCCGGTGAGGATCACCTCTTTGACGCCCAGCGCGTTCAGTTCACTGATG < 1:16792769/67‑1 CGCTGCGCGTGGATTATCGCCGGTGAGGATCACCCCTTTGACGCCCAGCGCGTTCAGTTCACTGATG < 1:30219978/67‑1 CGCTGCGCGTGGATTATCGCCGGTGAGGATCACCCCTTTGACGCCCAGCGCGTTCAGTTCACTGATG < 1:26686374/67‑1 GCTGCGCGTGGATTATCGCCGGTGAGGATCGCCCCTTTGACGCCCAGCGCGTTCAGTTCACTGATGGC < 1:27847895/68‑1 GCTGCGCGTGGATTATCGCCGGTGAGGATCACCCCTTTGACGCCCCGCGCGTTCAGTTCACTGATGGC > 1:2586302/1‑68 GCTGCGCGTGGATTATCGCCGGTGAGGATCACCCCTTTGACGCCCAGCGCGTTCAGTTCACTGATGGC < 1:4047943/68‑1 CTGCGCGTGGATTATCGCCGGTGAGGATCACCCCTTTGACGCCCAGCGCGTTCAGTTCACTGATGGCA > 1:17555308/1‑68 CTGCGCGTGGATTATCGCCGGTGAGGATCACCCCTTTGACGCCCAGCGCGTTCAGTTCACTGATGGCA > 1:2071824/1‑68 TGCGCGTGGATTATCGCCGGTGAGGATCACCCCTTTGACGCCCAGCGCGTTCAGTTCACTGATGGCAG > 1:13913527/1‑68 TGCGCGTGGATTATCGCCGGTGAGGATCACCCCTTTGACGCCCAGCGCGTTCAGTTCACTGATGGCA < 1:3777727/67‑1 TGCGCGTGGATTATCGCCGGTGAGGATCACCCCTTTGACGCCCAGCGCGTTCAGTTCACTGATGGCA < 1:36489892/67‑1 TGCGCGTGGATTATCGCCGGTGAGGATCACCCCTTTGACGCCCAGCGCGTTCAGTTCACTGATGGCA < 1:22837121/67‑1 TGCGCGTGGATTATCGCCGGTGAGGATCACCCCTTTGACGCCCAGCGCGTTCAGTTCACTGATGGCA < 1:15345687/67‑1 TGCGCGTGGATTATCGCCGGTGAGGATCACCCCTTTGACGCCCAGCGCGTTCAGTTCACTGATGGCA < 1:9831557/67‑1 GCGCGTGGATTATCGCCGGTGAGGATCACCCCTTTGACGCCCAGCGCGTTCAGTTCACTGATGGCAGT < 1:37102389/68‑1 GCGCGTGGATTATCGCCGGTGAGGATCACCCCTTTGACGCCCAGCGCGTTCAGTTCACTGATGGCAGT < 1:8192230/68‑1 GCGCGTGGATTATCGCCGGTGAGGATCACCCCTTTGACGCCCAGCGCGTTCAGTTCACTGATGGCAGT < 1:25624574/68‑1 GCGCGTGGATTATCGCCGGTGAGGATCACCCCTTTGACGCCCAGCGCGTTCAGTTCACTGATGGCAGT < 1:9640152/68‑1 GCGCGTGGATTATCGCCGGTGAGGATCACCCCTTTGACGCCCAGCGCGTTCAGTTCACTGATGGCAGT < 1:10629013/68‑1 CTTGGTGTCATTGCGTTACAGGATACCCTGCGCGCCGATGCTGCAACTGCCATCAGTGAACTGAACGCGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/3601464‑3601535‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgctgCGCGTGGATTATCGCCGGTGAGGATCACCCCTTTGACGCCCAGCGCGTTCAGTTCACTGATGGCAGT < CP009273/3601575‑3601509 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |