| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 3601535 | 503 (1.130) | 22 (0.050) | 13/102 | NT | 5.3% | coding (1725/2199 nt) | zntA | zinc, cobalt and lead efflux system |
| ? | CP009273 | = 3601575 | 330 (0.810) | coding (1765/2199 nt) | zntA | zinc, cobalt and lead efflux system | |||||
Only 100 of 654 total aligned reads displayed.
GTGTCATTGCGTTACAGGATACCCTGCGCGCCGATGCTGCAACTGCCATCAGTGAACTGAACGCGCTGGGCGTCAAAGGGGTGATCCTCACCGGCGATAATCCACGCGCAGCGGCGGCAATTGCCGGGGAGCTGG > CP009273/3601468‑3601602 | tgtCATTGCGTTACAGGATACCCTGCGCGCCGATGCTGCAACTGCCATCAGTGAACTGAACGCGCTgg > 1:6268825/1‑68 (MQ=255) tgtCATTGCGTTACAGGATACCCTGCGCGCCGATGCTGCAACTGCCATCAGTGAACTGAACGCGCTgg > 1:23385217/1‑68 (MQ=255) gtCATTGCGTTACAGGATACCCTGCGCGCCGATGCTGCAACTGCCATCAGTGAACTGAACGCGCTgg > 1:31358870/1‑67 (MQ=255) gtCATTGCGTTACAGGATACCCTGCGCGCCGATGCTGCAACTGCCATCAGTGAACTGAACGCGCTgg < 1:136380/67‑1 (MQ=255) gtCATTGCGTTACAGGATACCCTGCGCGCCGATGCTGCAACTGCCATCAGTGAACTGAACGCGCTgg > 1:15405910/1‑67 (MQ=255) cATTGCGTTACAGGATACCCTGCGCGCCGTTGCTGCAACTGCCATCAGTGAACTGAACGCGCTGGGCg < 1:21342488/68‑1 (MQ=255) cATTGCGTTACAGGATACCCTGCGCGCCGATGCTGCAACTGCCATCAGTGAACTGAACGCGCTGGGCg < 1:5028685/68‑1 (MQ=255) cATTGCGTTACAGGATACCCTCCGCGCCGATGCTGCAACTGCCATCAGTGAACTGAACGCGCTGGGc < 1:35856708/67‑1 (MQ=255) aTTGCGTTACAGGATACCCTGCGCGCCGATGCTGCAACTGCCATCAGTGAACTGAACGCGCTGGGCg > 1:3702137/1‑67 (MQ=255) aTTGCGTTACAGGATACCCTGCGCGCCGATGCTGCAACTGCCATCAGTGAACTGAACGCGCTGGGCGt < 1:16581942/68‑1 (MQ=255) ttGCGTTACAGGATACCCTGCGCGCCGATGCTGCAACTGCCATCAGTGAACTGAACGCGCTGGGCGTc < 1:24980314/68‑1 (MQ=255) tGCGTTACAGGATACCCTGCGCGCCGATGCTGCAACTGCCATCAGTGAACTGAACGCGCTGGGCGTCa > 1:22268952/1‑68 (MQ=255) tGCGTTACAGGATACCCTGCGCGCCGATGCTGCAACTGCCATCAGTGAACTGAACGCGCTGGGCGTCa > 1:2111238/1‑68 (MQ=255) tGCGTTACAGGATACCCTGCGCGCCGATGCTGCAACTGCCATCAGTGAACTGAACGCGCTGGGCGTCa > 1:13351860/1‑68 (MQ=255) tACAGGATACCCTGCGCGCCGATGCTGCAACTGCCATCAGTGAACTGAACGCGCTGGGCGTCAAAgg < 1:34118455/67‑1 (MQ=255) tACAGGATACCCTGCGCGCCGATGCTGCAACTGCCATCAGTGAACTGAACGCGCTGGGCGTCAAAgg < 1:25269110/67‑1 (MQ=255) tACAGGATACCCTGCGCGCCGATGCTGCAACTGCCATCAGTGAACTGAACGCGCTGGGCGTCAAAgg < 1:2760945/67‑1 (MQ=255) aCAGGATACCCTGCGCGCCGATGCTGCAACTGCCATCAGTGAACTGAACGCGCTGGGCGTCAAAgggg > 1:33732555/1‑68 (MQ=255) ccggATACACTGCGCGCCTATGCTGCAACTGCCATCAGTGAACTGAACGCGCTGGGCGTCAAAGGGGt < 1:2842061/66‑1 (MQ=255) aGGATACCCTGCGCGCCGATGCTGCAACTGCCATCAGTGAACTGATCGCGCTGGGCGTCAAAGGGGTg > 1:14096341/1‑68 (MQ=255) aGGATACCCTGCGCGCCGATGCTGCAACTGCCATCAGTGAACTGAACGCGCTGGGCGTCAAAGGGGTg > 1:24470296/1‑68 (MQ=255) aGGATACCCTGCGCGCCGATGCTGCAACTGCCATCAGTGAACTGAACGCGCTGGGCGTCAAAGGGGTg > 1:23727014/1‑68 (MQ=255) aGGATACCCTGCGCGCCGATGCTGCAACTGCCATCAGTGAACTGAACGCGCTGGGCGTCAAAGGGGTg > 1:22064525/1‑68 (MQ=255) aGGATACCCTGCGCGCCGATGCTGCAACTGCCATCAGTGAACTGAACGCGCTGGGCGTCAAAGGGGTg > 1:25964605/1‑68 (MQ=255) aGGATACCCTGCGCGCCGATGCTGCAACTGCCATCAGTGAACTGAACGCGCTGGGCGTCAAAGGGGTg > 1:5590337/1‑68 (MQ=255) aGGATACCCTGCGCGCCGATGCTGCAACTGCCATCAGTGAACTGAACGCGCTGGGCGTCAAAGGGGTg > 1:18328712/1‑68 (MQ=255) aGGATACCCTGCGCGCCGATGCTGCAACTGCCATCAGTGAACTGAACGCGCTGGGCGTCAAAGGGGTg > 1:30651400/1‑68 (MQ=255) aGGATACCCTGCGCGCCGATGCTGCAACTGCCATCAGTGAACTGAACGCGCTGGGCGTCAAAGGGGTg > 1:34644740/1‑68 (MQ=255) aGGATACCCTGCGCGCCGATGCTGCAACTGCCATCAGTGAACTGAACGCGCTGGGCGTCAAAGGGGTg > 1:35603487/1‑68 (MQ=255) aGGATACCCTGCGCGCCGATGCTGCAACTGCCATCAGTGAACTGAACGCGCTGGGCGTCAAAGGGGTg > 1:36878095/1‑68 (MQ=255) aGGATACCCTGCGCGCCGATGCTGCAACTGCCATCAGTGAACTGAACGCGCTGGGCGTCAAAGGGGTg > 1:10761467/1‑68 (MQ=255) gATACCCTGCGCGCCGATGCTGCAACTGCCATCAGTGAACTGAACGCGCTGGGCGTCAAAGGGGTGa > 1:14663342/1‑67 (MQ=255) aTACCCTGCGCGCCGATGCTGCAACTGCCATCAGTGAACTGAACGCGCTGGGCGTCAAAGGGGTGAt > 1:29074967/1‑67 (MQ=255) aTACCCTGCGCGCCGATGCTGCAACTGCCATCAGTGAACTGAACGCGCTGGGCGTCAAAGGGGTGAt > 1:6061725/1‑67 (MQ=255) aTACCCTGCGCGCCGATGCTGCAACTGCCATCAGTGAACTGAACGCGCTGGGCGTCAAAGGGGTGAt > 1:36234686/1‑67 (MQ=255) aTACCCTGCGCGCCGATGCTGCAACTGCCATCAGTGAACTGAACGCGCTGGGCGTCAAAGGGGTGAt > 1:584743/1‑67 (MQ=255) aTACCCTGCGCGCCGATGCTGCAACTGCCATCAGTGAACTGAACGCGCTGGGCGTCAAAGGGGTGAt > 1:11721443/1‑67 (MQ=255) aTACCCTGCGCGCCGATGCTGCAACTGCCATCAGTGAACTGAACGCGCTGGGCGTCAAAGGGGTGAt < 1:1923335/67‑1 (MQ=255) aTACCCTGCGCGCCGATGCTGCAACTGCCATCAGTGAACTGAACGCGCTGGGCGTCAAAGGGGTGAt < 1:12025754/67‑1 (MQ=255) aTACCCTGCGCGCCGATGCTGCAACTGCCATCAGTGAACTGAACGCGCTGGGCGTCAAAGGGGTGAt > 1:14318892/1‑67 (MQ=255) aTACCCTGCGCGCCGATGCTGCAACTGCCATCAGTGAACTGAACGCGCTGGGCGTCAAAGGGGTGAt > 1:12932761/1‑67 (MQ=255) aCCCTGCGCGCCGATGCTGCAACTGCCATCAGTGAACTGAACGCGCTGGGCGTCAAAGGGGTGATcc > 1:32132484/1‑67 (MQ=255) aCCCTGCGCGCCGATGCTGCAACTGCCATCAGTGAACTGAACGCGCTGGGCGTCAAAGGGGTGATcc > 1:32738106/1‑67 (MQ=255) aCCCTGCGCGCCGATGCTGCAACTGCCATCAGTGAACTGAACGCGCTGGGCGTCAAAGGGGTGATcc > 1:35392465/1‑67 (MQ=255) aCCCTGCGCGCCGATGCTGCAACTGCCATCAGTGAACTGAACGCGCTGGGCGTCAAAGGGGTGATcc > 1:27090992/1‑67 (MQ=255) aCCCTGCGCGCCGATGCTGCAACTGCCATCAGTGAACTGAACGCGCTGGGCGTCAAAGGGGTGATcc > 1:8568392/1‑67 (MQ=255) aCCCTGCGCGCCGATGCTGCAACTGCCATCAGTGAACTGAACGCGCTGGGCGTCAAAGGGGTGATcc > 1:2466930/1‑67 (MQ=255) aCCCTGCGCGCCGATGCTGCAACTGCCATCAGTGAACTGAACGCGCTGGGCGTCAAAGGGGTGATcc > 1:24149803/1‑67 (MQ=255) aCCCTGCGCGCCGATGCTGCAACTGCCATCAGTGAACTGAACGCGCTGGGCGTCAAAGGGGTGATcc > 1:21623248/1‑67 (MQ=255) cccTGCGCGCCGATGCTGCAACTGCCATCAGTGAACTGAACGCGCTGGGCGTCAAAGGGGTGATCCTc > 1:1995731/1‑68 (MQ=255) cccTGCGCGCCGATGCTGCAACTGCCATCAGTGAACTGAACGCGCTGGGCGTCAAAGGGGTGATCCTc > 1:10312264/1‑68 (MQ=255) cccTGCGCGCCGATGCTGCAACTGCCATCAGTGAACTGAACGCGCTGGGCGTCAAAGGGGTGATCCTc > 1:27928766/1‑68 (MQ=255) cccAGCGCGCCGATGCTGCAACTGCCATCAGTGAACTGAACGCGCTGGGCGTCAAAGGGGTGATCCTc > 1:15160407/1‑68 (MQ=255) ccTGCGCGCCGATGCTGCAACTGCCATCAGTGAACTGAACGCGCTGGGCGTCAAAGGGGTGATCCTc > 1:19641602/1‑67 (MQ=255) ccTGCGCGCCGATGCTGCAACTGCCATCAGTGAACTGAACGCGCTGGGCGTCAAAGGGGTGATCCTc > 1:23893931/1‑67 (MQ=255) ccTGCGCGCCGATGCTGCAACTGCCATCAGTGAACTGAACGCGCTGGGCGTCAAAGGGGTGATCCTc > 1:28735221/1‑67 (MQ=255) cTGCGCGCCGATGCTGCAACTGCCATCAGTGAACTGAACGCGCTGGGCGTCAAAGGGGTGCTCCTCa > 1:17586392/1‑67 (MQ=255) cTGCGCGCCGATGCTGCAACTGCCATCAGTGAACTGAACGCGCTGGGCGTCAAAGGGGTGATCCTCa > 1:12460230/1‑67 (MQ=255) cTGCGCGCCGATGCTGCAACTGCCATCAGTGAACTGAACGCGCTGGGCGTCAAAGGGGTGATCCTCa > 1:35063725/1‑67 (MQ=255) cTGCGCGCCGATGCTGCAACTGCCATCAGTGAACTGAACGCGCTGGGCGTCAAAGGGGTGATCCTCa > 1:29323092/1‑67 (MQ=255) cTGCGCGCCGATGCTGCAACTGCCATCAGTGAACTGAACGCGCTGGGCGTCAAAGGGGTGATCCTCa > 1:17807425/1‑67 (MQ=255) cTGCGCGCCGATGCTGCAACTGCCATCAGTGAACTGAACGCGCTGGGCGTCAAAGGGGTGATCCTCa > 1:18688084/1‑67 (MQ=255) gcgcgcCGATGCTGCAACTGCCATCAGTGAACTGAACGCGCTGGGCGTCAAAGGGGTGATCCTCACCg > 1:34412675/1‑68 (MQ=255) gcgcCGATGCTGCAACTGCCATCAGTGAACTGAACGCGCTGGGCGTCAAAGGGGTGATCCTCACCGGc < 1:32651910/68‑1 (MQ=255) gcgcCGATGCTGCAACTGCCATCAGTGAACTGAACGCGCTGGGCGTCAAAGGGGTGATCCTCACCGGc < 1:23082891/68‑1 (MQ=255) gcgcCGATGCTGCAACTGCCATCAGTGAACTGAACGCGCTGGGCGTCAAAGGGGTGATCCTCACCGGc > 1:31237033/1‑68 (MQ=255) gcgcCGATGCTGCAACTGCCATCAGTGAACTGAACGCGCTGGGCGTCAAAGGGGTGATCCTCACCGGc < 1:27326655/68‑1 (MQ=255) ccGATGCTGCAACTGCCATCAGTGAACTGAACGCGCTGGGCGTCAAAGGGGTGATCCTCACCGGCGAt > 1:15841512/1‑68 (MQ=255) tgctgcAACTGCCATCAGTGAACTGAACGCGCTGGGCGTCAAAGGGGTGATCCTCACCGGCGATAAt < 1:16899396/67‑1 (MQ=255) tgcAACTGCCATCAGTGAACTGAACGCGCTGcgcgtggattatcgccggtgaggatcacccctttgac > 1:2618717‑M1/1‑31 (MQ=255) tgcAACTGCCATCAGTGAACTGAACGCGCTGGGCGTCAAAGGGGTGATCCTCACCGGCGATAATCCAc > 1:20289842/1‑68 (MQ=255) aaCTGCCATCAGTGAACTGAACGCGCTGGGCGTCTAAGGGGTGATCCTCACCGGCGATAATCCAcgc > 1:17306160/1‑67 (MQ=255) tGCCATCAGTGAACTGAACGCGCTGcgcgtggattatcgccggtgaggatcacccctttgacgccca > 1:33265343‑M1/1‑25 (MQ=255) tGCCATCAGTGAACTGAACGCGCTGGGCGTCAAAGGGGTGATCCTCACCGGCGATAATCCACGCGcag > 1:2071824‑M2/1‑65 (MQ=255) tGCCATCAGTGAACTGAACGCGCTGGGCGTCAAAGGGGTGATCCTCACCGGCGATAATCCACGCGca < 1:3777727‑M2/67‑3 (MQ=255) tGCCATCAGTGAACTGAACGCGCTGGGCGTCAAAGGGGTGATCCTCACCGGCGATAATCCACGCGca < 1:36489892‑M2/67‑3 (MQ=255) gCCATCAGTGAACTGAACGCGCTGGGCGTCAAAGGGGTGATCCTCACCGGCGATAATCCACGCGcagc < 1:4047943‑M2/68‑5 (MQ=255) cATCAGTGAACTGAACGCGCTGGGCGTCAAAGGGGTGATCCTCACCGGCGATAATCCACGCGcagcg < 1:30219978‑M2/67‑6 (MQ=255) cATCAGTGAACTGAACGCGCTGGGCGTCAAAGAGGTGATCCTCACCGGCGATAATCCACGCGcagcg < 1:16792769‑M2/67‑6 (MQ=255) tCAGTGAACTGAGCGCGCTGGGCGTCATAGGGGTGATCCTCACCGGCGATAATCCACGCGCAgcggcg > 1:4583025/1‑68 (MQ=255) cAGTGAACTGAACGCGCTGGGCGTCAAAGGGGTGATCCTCACCGGCGATAATCCACGCGCAGcggcgg < 1:31807268/68‑1 (MQ=255) aGTGAACTGAACGCGCTGGGCGTCAAAGGGGTGATCCTCACCGGCGATAATCCACGCGCAGCggcggc > 1:31031997/1‑68 (MQ=255) actgaacGCGCTGGGCGTCAAAGGGGTGATCCTCACCGGCGATAATCCACGCGcagcgcgttcagttc < 1:21829476‑M2/68‑16 (MQ=255) actgaacGCGCTGGGCGTCAAAGGGGTGATCCTCACCGGCGATAATCCACGCGCAGCGGCGGCAAtt > 1:4317605/1‑67 (MQ=255) actgaacGCGCTGGGCGTCAAAGGGGTGATCCTCACCGGCGATAATCCACGCGCAGCGGCGGCAAtt < 1:22722673/67‑1 (MQ=255) actgaacGCGCTGGGCGTCAAAGGGGTGATCCTCACCGGCGATAATCCACGCGCAGCGGCGGCAAtt > 1:10019201/1‑67 (MQ=255) actgaacGCGCTGGGCGTCAAAGGGGTGATCCTCACCGGCGATAATCCACGCGCAGCGGCGGCAAtt > 1:7008384/1‑67 (MQ=255) actgaacGCGCTGGGCGTCAAAGGGGTGATCCTCACCGGCGATAATCCACGCGCAGCGGCGGCAAtt > 1:29846454/1‑67 (MQ=255) tgaacGCGCTGGGCGTCAAAGGGGTGATCCTCACCGGCGATAATCCACGCGcagcgcgttcagttcac > 1:15605681‑M2/1‑51 (MQ=255) acGCGCTGGGCGTCAAAGGGGTGATCCTCACCGGCGATAATCCACGCGcagcgcgttcagttcactga > 1:36581760‑M2/1‑48 (MQ=255) acGCGCTGGGCGTCAAAGGGGTGATCCTCACCGGCGATAATCCACGCGCAGCGGCGGCAATTGCCggg > 1:9537838/1‑68 (MQ=255) cgcgCTGGGCGTCAAAGGGGTGATCCTCACCGGCGATAATCCACGCGCAGCGGCGGCAATTGCCgggg > 1:6515991/1‑68 (MQ=255) cgcgCTGGGCGTCAAAGGGGTGATCCTCACCGGCGATAATCCACGCGCAGCGGCGGCAATTGCCgggg > 1:9265929/1‑68 (MQ=255) cgcgCTGGGCGTCAAAGGGGGGATCCTCACCGGCGATAATCCACGCGCATCGGCGGCAATTGCCgggg < 1:33381077/68‑1 (MQ=255) ccgcTGGGCGTCAAAGGAGTGATCCTCACCGGCGATAATCCACGCGCAGCGGCGGCAATTGCCGGGGa < 1:7808882/67‑1 (MQ=255) cgcTGcgcgtggattatcgccggtgaggatcacccctttgacgcccagcgcgttcagttcactgatg < 1:26686374‑M1/67‑63 (MQ=255) cTGGGCGTCAAAGGGGTGATCCTCACCGGCGATAATCCACGCGCAGCGGCGGCAATTGCCGGGGa > 1:25508271/1‑65 (MQ=255) tGcgcgtggattatcgccggtgaggatcacccctttgacgcccagcgcgttcagttcactgatggcag > 1:13913527‑M1/1‑2 (MQ=255) gcgcgtggattatcgccggtgaggatcacccctttgacgcccagcgcgttcagttcactgatggcagt < 1:25624574‑M1/68‑68 (MQ=255) gcgcgtggattatcgccggtgaggatcacccctttgacgcccagcgcgttcagttcactgatggcagt < 1:8192230‑M1/68‑68 (MQ=255) | GTGTCATTGCGTTACAGGATACCCTGCGCGCCGATGCTGCAACTGCCATCAGTGAACTGAACGCGCTGGGCGTCAAAGGGGTGATCCTCACCGGCGATAATCCACGCGCAGCGGCGGCAATTGCCGGGGAGCTGG > CP009273/3601468‑3601602 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |