| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 3601535 | 503 (1.130) | 22 (0.050) | 13/102 | NT | 5.3% | coding (1725/2199 nt) | zntA | zinc, cobalt and lead efflux system |
| ? | CP009273 | = 3601575 | 330 (0.810) | coding (1765/2199 nt) | zntA | zinc, cobalt and lead efflux system | |||||
Only 100 of 406 total aligned reads displayed.
ACTGCCATCAGTGAACTGAACGCGCTGGGCGTCAAAGGGGTGATCCTCACCGGCGATAATCCACGCGCAGCGGCGGCAATTGCCGGGGAGCTGGGGCTGGAGTTTAAAGCGGGCCTGTTGCCGGAAGATAAAGT > CP009273/3601509‑3601642 | aCTGCCATCAGTGAACTGAACGCGCTGGGCGTCAAAGGGGTGATCCTCACCGGCGATAATCCACGCGc < 1:9640152‑M2/68‑2 (MQ=255)aCTGCCATCAGTGAACTGAACGCGCTGGGCGTCAAAGGGGTGATCCTCACCGGCGATAATCCACGCGc < 1:8192230‑M2/68‑2 (MQ=255) gCCATCAGTGAACTGAACGCGCGGGGCGTCAAAGGGGTGATCCTCACCGGCGATAATCCACGCGcagc > 1:2586302‑M2/1‑64 (MQ=255) cATCAGTGAACTGAACGCGCTGGGCGTCAAAGGGGTGATCCTCACCGGCGATAATCCACGCGcagcg < 1:30219978‑M2/67‑6 (MQ=255) cATCAGTGAACTGAACGCGCTGGGCGTCAAAGAGGTGATCCTCACCGGCGATAATCCACGCGcagcg < 1:16792769‑M2/67‑6 (MQ=255) cATCAGGGAACTGAACGCGCTGGGCGTCAAAGGGGTGATCCTCACCGGCGATAATCCACGCGcagcgc > 1:35525882‑M2/1‑62 (MQ=255) tCAGTGAACTGAACGCGCTGGGCGTCAAAGGGGTGATCCTCACCGGCGATAATCCACGCGCAgcggcg > 1:25424902/1‑68 (MQ=255) tCAGTGAACTGAACGCGCTGGGCGTCAAAGGGGTGATCCTCACCGGCGATAATCCACGCGCAgcggcg > 1:30920757/1‑68 (MQ=255) gTGAACTGAACGCGCTGGGCGTCAAAGGGGTGATCCTCACCGGCGATAATCCACGCGCAGCGGCGGCa > 1:2099730/1‑68 (MQ=255) gTGAACTGAACGCGCTGGGCGTCAAAGGGGTGATCCTCACCGGCGATAATCCACGCGCAGCGGCGGCa > 1:12491585/1‑68 (MQ=255) actgaacGCGCTGGGCGTCAAAGGGGTGATCCTCACCGGCGATAATCCACGCGCAGCGGCGGCAAtt > 1:21487686/1‑67 (MQ=255) actgaacGCGCTGGGCGTCAAAGGGGTGATCCTCACCGGCGATAATCCACGCGCAGCGGCGGCAAtt > 1:18373585/1‑67 (MQ=255) actgaacGCGCTGGGCGTCAAAGGGGTGATCCTCACCGGCGATAATCCACGCGCAGCGGCGGCAAtt > 1:621380/1‑67 (MQ=255) actgaacGCGCTGGGCGTCAAAGGGGTGATCCTCACCGGCGATAATCCACGCGCAGCGGCGGCAAtt > 1:36804540/1‑67 (MQ=255) actgaacGCGCTGGGCGTCAAAGGGGTGATCCTCACCGGCGATAATCCACGCGCAGCGGCGGCAAtt < 1:33750411/67‑1 (MQ=255) actgaacGCGCTGGGCGTCAAAGGGGTGATCCTCACCGGCGATAATCCACGCGCAGCGGCGGCAAtt > 1:14609505/1‑67 (MQ=255) tgaacGCGCTGGGCGTCAAAGGGGTGATCCTCACCGGCGATAATCCACGCGcagcgcgttcagttcac > 1:15605681‑M2/1‑51 (MQ=255) tgaacGCGCTGGGCGTCAAAGGGGTGATCCTCACCGGCGATAATCCACGCGCAGCGGCGGCAATTGcc < 1:5869488/68‑1 (MQ=255) tgaacGCGCTGGGCGTCAAAGGGGTGATCCTCACCGGCGATAATCCACGCGCAGCGGCGGCAATTGcc < 1:15358826/68‑1 (MQ=255) acGCGCTGGGCGTCAAAGGGGTGATCCTCACCGGCGATAATCCACGCGCAGCGGCGGCAATTGCCggg > 1:21304621/1‑68 (MQ=255) acGCGCTGGGCGTCAAAGGGGTGATCCTCACCGGCGATAATCCACGCGCAGCGGCGGCAATTGCCggg > 1:31163638/1‑68 (MQ=255) acGCGCTGGGCGTCAAAGGGGTGATCCTCACCGGCGATAATCCACGCGCAGCGGCGGCAATTGCCgg < 1:13496949/67‑1 (MQ=255) cgcgCTGGGCGTCAAAGGGGTGATCCTCACCGGCGATAATCCACGCGCAGCGGCGGCAATTGCCgggg > 1:9265929/1‑68 (MQ=255) cgcgCTGGGCGTCAAAGGGGGGATCCTCACCGGCGATAATCCACGCGCATCGGCGGCAATTGCCgggg < 1:33381077/68‑1 (MQ=255) gcgcTGGGCGTCAAAGGGGTGATCCTCACCGGCGATAATCCACGCGCAGCGGCGGCAATTGCCGGGGa < 1:29201794/68‑1 (MQ=255) gcgcTGGGCGTCAAAGGGGTGATCCTCACCGGCGATAATCCACGCGCAGCGGCGGCAATTGCCGGGGa < 1:25593001/68‑1 (MQ=255) gcgcTGGGCGTCAAAGGGGCGAGCCTCACCGGCGATAATCCACGCGCAGCGGCGGCAATTGCCGGGGa < 1:22491756/68‑1 (MQ=255) cgcTGGGCGTCAAAGGGGTGATCCTCACCGGCGATAATCCACGCGCAGCGGCGGCAATTGCCGGGGa > 1:31463825/1‑67 (MQ=255) cgcTGGGCGTCAAAGGGGTGATCCTCACCGGCGATAATCCACGCGCAGCGGCGGCAATTGCCGGGGa > 1:36048733/1‑67 (MQ=255) gcTGGGCGTCAAAGGGGTGATCCTCACCGGCGATAATCCACGCGCAGCGGCGGCAATTGCCGGGGAg < 1:14674966/67‑1 (MQ=255) cTGGGCGTCAAAGGGGTGATCCTCACCGGCGATAATCCACGCGCAGCGGCGGCAATTGCCGGGGa > 1:27213786/1‑65 (MQ=255) cTGGGCGTCAAAGGGGTGATCCTCACCGGCGATAATCCACGCGCAGCGGCGGCAATTGCCGGGGa > 1:36423148/1‑65 (MQ=255) gCGTCAAAGGGGTGATCCTCACCGGCGATAATCCACGCGCAGCGGCGGCAATTGCCGGGGAGCTggg < 1:16644717/67‑1 (MQ=255) cGTCAAAGGGGTGATCCTCACCGGCGATAATCCACGCGCAGCGGCGGCAATTGCCGGGGAGCTggg > 1:36530388/1‑66 (MQ=255) cGTCAAAGGGGTGATCCTCACCGGCGATAATCCACGCGCAGCGGCGGCAATTGCCGGGGAGCTggg > 1:3301740/1‑66 (MQ=255) gccacaggGGCGAGCCGCACCGGCGATAATCCACGCGcagcgcgttcagttcactgatggcagttgca > 1:14211224‑M2/3‑37 (MQ=255) cAAAGGGGTGATCCTCACCGGCGATAATCCACGCGCAGCGGCGGCAATTGCCGGGGAGCTGGGGCTgg < 1:8525118/68‑1 (MQ=255) cAAAGGGGTGATCCTCACCGGCGATAATCCACGCGCAGCGGCGGCAATTGCCGGGGAGCTGGGGCTgg < 1:1884919/68‑1 (MQ=255) cAAAGGGGTGAACCTCACCGGCGATAATCCACGCGcagcgcgttcagttcactgatggcagttgcagc > 1:32628185‑M2/1‑35 (MQ=255) aaaGGGGTGATCCTCACCGGCGATAATCCACGCGCAGCGGCGGCAATTGCCGGGGAGCTGGGGCTGGa > 1:12272055/1‑68 (MQ=255) aaGGGGTGATCCTCACCGGCGATAATCCACGCGCAGCGGCGGCAATTGCCGGGGAGCTGGGGCTGGAg < 1:1735694/68‑1 (MQ=255) aaGGGGTGATCCTCACCGGCGATAATCCACGCGCAGCGGCGGCAATTGCCGGGGAGCTGGGGCTGGAg > 1:2354644/1‑68 (MQ=255) aaGGGGTGATCCTCACCGGCGATAATCCACGCGCAGCGGCGGCAATTGCCGGGGAGCTGGGGCTGGAg > 1:6505075/1‑68 (MQ=255) aaGGGGTGATCCTCACCGGCGATAATCCACGCGCAGCGGCGGCAATTGCCGGGGAGCTGGGGCTGGAg < 1:26788385/68‑1 (MQ=255) aGGGGTGATCCTCACCGGCGATAATCCACGCGCAGCGGCGGCAATTGCCGGGGAGCTGGGGCTGGAGt < 1:144578/68‑1 (MQ=255) aGGGGTGATCCTCACCGGCGATAATCCACGCGCAGCGGCGGCAATTGCCGGGGAGCTGGGGCTGGAGt < 1:30764936/68‑1 (MQ=255) aGGGGTGATCCTCACCGGCGATAATCCACGCGCAGCGGCGGCAATTGCCGGGGAGCTGGGGCTGGAGt < 1:16029566/68‑1 (MQ=255) aGGGGTGATCCTCACCGGCGATAATCCACGCGCAGCGGCGGCAATTGCCGGGGAGCTGGGGCTGGAGt > 1:4466591/1‑68 (MQ=255) aGGGGTGATCCTCACCGGCGATAATCCACGCGCAGCGGCGGCAATTGCCGGGGAGCTGGGGCTGGAGt < 1:19313589/68‑1 (MQ=255) aGGGGTGATCCTCACCGGCGATAATCCACGCGCAGCGGCGGCAATTGCCGGGGAGCTGGGGCTGGAGt > 1:1334065/1‑68 (MQ=255) aGGGGTGATCCTCACCGGCGATAATCCACGCGCAGCGGCGGCAATTGCCGGGGAGCTGGGGCTGGAGt < 1:10773031/68‑1 (MQ=255) gggTGATCCTCACCGGCGATAATCCACGCGCAGCGGCGGCAATTGCCGGGGAGCTGGGGCTGGAGttt > 1:28507029/1‑68 (MQ=255) gggTGATCCTCACCGGCGATAATCCACGCGCAGCGGCGGCAATTGCCGGGGAGCTGGGGCTGGAGttt > 1:35155389/1‑68 (MQ=255) ggTGATCCTCACCGGCGATAATCCCCGCGCAGCGGCGGCAATTGCCGGGGAGCTGGGGCGGGAGTTTa > 1:32754562/1‑68 (MQ=255) ggTGATCCTCACCGGCGATAATCCACGCGCAGCGGCGGCAATTGCCGGGGAGCTGGGGCTGGAGTTTa > 1:31913238/1‑68 (MQ=255) ggTGATCCTCACCGGCGATAATCCACGCGCAGCGGCGGCAATTGCCGGGGAGCTGGGGCTGGAGTTTa > 1:31876772/1‑68 (MQ=255) ggTGATCCTCACCGGCGATAATCCACGCGCAGCGGCGGCAATTGCCGGGGAGCTGGGGCTGGAGTTTa > 1:7116929/1‑68 (MQ=255) ggTGATCCTCACCGGCGATAATCCACGCGCAGCGGCGGCAATTGCCGGGGAGCTGGGGCTGGAGTTTa > 1:20626132/1‑68 (MQ=255) ggTGATCCTCACCGGCGATAATCCACGCGCAGCGGCGGCAATTGCCGGGGAGCTGGGGCTGGAGTTTa > 1:7649611/1‑68 (MQ=255) gATCCTCACCGGCGATAATCCACGCGCAGCGGCGGCAATTGCCGGGGAGCTGGGGCTGGAGTTTaaa < 1:17542389/67‑1 (MQ=255) gATCCTCACCGGCGATAATCCACGCGCAGCGGCGGCAATTGCCGGGGAGCTGGGGCTGGAGTTTaaa < 1:11882224/67‑1 (MQ=255) tCCTCACCGGCGATAATCCACGCGCAGCGGCGGCAATTGCCGGGGAGCTGGGGCTGGAGTTTAAAGCg > 1:37048862/1‑68 (MQ=255) tCCTCACCGGCGATAATCCACGCGCAGCGGCGGCAATTGCCGGGGAGCTGGGGCTGGAGTTTAAAGCg > 1:23166535/1‑68 (MQ=255) cTCACCGGCGATAATCCACGCGCAGCGGCGGCAATTGCCGGGGAGCTGGGGCTGGAGTTTAAAGCggg < 1:20264420/68‑1 (MQ=255) cTCACCGGCGATAATCCACGCGCAGCGGCGGCAATTGCCGGGGAGCTGGGGCTGGAGTTTAAAGCgg > 1:7342189/1‑67 (MQ=255) aCCGGCGATAATCCACGCGcagcgcgttgagttcactgatggcagttgcagcatcggcgcgcagggta < 1:9040533‑M2/68‑50 (MQ=255) aCCGGCGATAATCCACGCGCAGCGGCGGCAATTGCCGGGGAGCTGGGGGTGGAGTTTAAAGCggg > 1:26334625/1‑65 (MQ=255) aCCGGCGATAATCCACGCGCAGCGGCGGCAATTGCCGGGGAGCTGGGGCTGGAGTTTAAAGCggg > 1:13957002/1‑65 (MQ=255) aCCGGCGATAATCCACGCGCAGCGGCGGCAATTGCCGGGGAGCTGGGGCTGGAGTTTAAAGCggg > 1:6638305/1‑65 (MQ=255) ccGGCGATAATCCACGCGCAGCGGCGGCAATTGCCGGGGAGCTGGGGCTGGAGTTTAAAGCggg > 1:2883465/1‑64 (MQ=255) ccGGCGATAATCCACGCGCAGCGGCGGCAATTGCCGGGGAGCTGGGGCTGGAGTTTAAAGCggg > 1:17825394/1‑64 (MQ=255) ccGGCGATAATCCACGCGCAGCGGCGGCAATTGCCGGGGAGCTGGGGCTGGAGTTTAAAGCggg > 1:32327519/1‑64 (MQ=255) ccGGCGATAATCCACGCGCAGCGGCGGCAATTGCCGGGGAGCTGGGGCTGGAGTTTAAAGCggg > 1:12987310/1‑64 (MQ=255) ccGGCGATAATCCACGCGCAGCGGCGGCAATTGCCGGGGAGCTGGGGCTGGAGTTTAAAGCggg > 1:3902270/1‑64 (MQ=255) ccGGCGATAATCCACGCGCAGCGGCGGCAATTGCCGGGGAGCTGGGGCTGGAGTTTAAAGCggg > 1:4148805/1‑64 (MQ=255) cGGCGATAATCCACGCGCAGCGGCGGCAATTGCCGGGGAGCTGGGGCTGGAGTTTAAAGCGGGCCTGt < 1:34101927/68‑1 (MQ=255) ggCGATAATCCACGCGCAGCGGCGGCAATTGCCGGGGAGCTGGGGCTGGAGTTTAAAGCGGGCCTGtt > 1:4867701/1‑68 (MQ=255) ggCGATAATCCACGCGCAGCGGCGGCAATTGCCGGGGAGCTGGGGCTGGAGTTTAAAGCGGGCCTGtt > 1:24127042/1‑68 (MQ=255) ggCCATAATCCACGCGCAGCGGCGGCAATTGCCGCGGACCTGGGGCTGGAGTTAAAAGCGGGCCTGtt > 1:19792971/1‑68 (MQ=255) cGATAATCCACGCGCAGCGGCGGCAATTGCCGGGGAGCTGGGGCTGGAGTTTAAAGCGGGCCTGTTg > 1:24668048/1‑67 (MQ=255) gATAATCCACGCGCAGCGGCGGCAATTGCCGGGGAGCTGGGGCTGGAGTTTAAAGCGGGCCTGTTGcc > 1:29789917/1‑68 (MQ=255) gATAATCCACGCGCAGCGGCGGCAATTGCCGGGGAGCTGGGGCTGGAGTTTAAAGCGGGCCTGTTGcc > 1:5740793/1‑68 (MQ=255) gATAATCCACGCGCAGCGGCGGCAATTGCCGGGGAGCTGGGGCTGGAGTTTAAAGCGGGCCTGTTGc < 1:2995707/67‑1 (MQ=255) tCCACGCGCAGCGGCGGCAATTGCCGGGGAGCTGGGGCTGGAGTTTAAAGCGGGCCTGTTGCCGGAAg > 1:27652534/1‑68 (MQ=255) tCCACGCGCAGCGGCGGCAATTGCCGGGGAGCTGGGGCTGGAGTTTAAAGCGGGCCTGTTGCCGGAAg > 1:7882791/1‑68 (MQ=255) tCCACGCGCAGCGGCGGCAATTGCCGGGGAGCTGGGGCTGGAGTTTAAAGCGGGCCTGTTGCCGGAAg < 1:27788903/68‑1 (MQ=255) tCCACGCGCAGCGGCGGCAATTGCCGGGGAGCTGGGGCTGGAGTTTAAAGCGGGCCTGTTGCCGGAAg > 1:10010704/1‑68 (MQ=255) tCCACGCGCAGCGGCGGCAATTGCCGGGGAGCTGGGGCTGGAGTTTAAAGCGGGCCTGTTGCCGGAAg > 1:22058269/1‑68 (MQ=255) tCCACGCGCAGCGGCGGCAATTGCCGGGGAGCTGGGGCTGGAGTTTAAAGCGGGCCTGTTGCCGGAAg > 1:18937465/1‑68 (MQ=255) tCCACGCGCAGCGGCGGCAATTGCCGGGGAGCTGGGGCTGGAGTTTAAAGCGGGCCTGTTGCCGGAAg < 1:11509909/68‑1 (MQ=255) tCCACGCGCAGCGGCGGCAATTGCCGGGGAGCTGGGGCTGGAGTTTAAAGCGGGCCTGTTGCCGGAAg < 1:10241137/68‑1 (MQ=255) cgaCGCGCAGCGGCGGGAATTGCCGGGGAGCTTGGGCTGGAGTTTAAAGCGGGCCTGTTGCCGTAAGa < 1:23955958/66‑1 (MQ=255) ccACGCGCAGCGGCGGCAATTGCCGGGGAGCTGGGGCTGGAGTTTAAAGCGGGCCTGTTGCCGGAAGa < 1:27982190/68‑1 (MQ=255) ccACGCGCAGCGGCGGCAATTGCCGGGGAGCTGGGGCGGGAGGTTAAAGCGGGCCTGTTGCCGGAAGa < 1:21789217/68‑1 (MQ=255) gcgcAGCGGCGGCAATTGCCGGGGAGCTGGGGCTGGAGTTTAAAGCGGGCCTGTTGCCGGAAGATaaa > 1:10603626/1‑68 (MQ=255) gcgcAGCGGCGGCAATTGCCGGGGAGCTGGGGCTGGAGGTTAACGAGGTCCTGATGCCGGAAGATatt > 1:15055121/1‑66 (MQ=255) cgcAGCGGCGGCAATTGCCGGGGAGCTGGGGCTGGAGTTTAAAGCGGGCCTGTTGCCGGAAGATAAAg > 1:30366131/1‑68 (MQ=255) gcAGCGGCGGCAATTGCCGGGGAGCTGGGGCTGGAGTTTAAAGCGGGCCTGTTGCCGGAAGATAAAg < 1:5381485/67‑1 (MQ=255) gcAGCGGCGGCAATTGCCGGGGAGCTGGGGCTGGAGTTTAAAGCGGGCCTGTTGCCGGAAGATAAAg < 1:6885287/67‑1 (MQ=255) gcAGCGGCGGCAATTGCCGGGGAGCTGGGGCTGGAGTTTAAAGCGGGCCTGTTGCCGGAAGATAAAg < 1:22859225/67‑1 (MQ=255) | ACTGCCATCAGTGAACTGAACGCGCTGGGCGTCAAAGGGGTGATCCTCACCGGCGATAATCCACGCGCAGCGGCGGCAATTGCCGGGGAGCTGGGGCTGGAGTTTAAAGCGGGCCTGTTGCCGGAAGATAAAGT > CP009273/3601509‑3601642 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |