| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 775865 | 448 (1.010) | 24 (0.070) | 9/88 | NT | 6.3% | intergenic (+20/‑145) | ybgF/lysT | periplasmic TolA‑binding protein/tRNA‑Lys |
| ? | CP009273 | = 775875 | 362 (1.040) | intergenic (+30/‑135) | ybgF/lysT | periplasmic TolA‑binding protein/tRNA‑Lys | |||||
Only 100 of 281 total aligned reads displayed.
AAATACCCTGGTACTGATGGCGCTAAACAGGCACAAAAACGTCTGAACGCGATGTAATGCATAACACACGACCAGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/775789‑775865‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acacgaccagaaATAATGCGACTTCTGGTCGTGTGTTATGCATTACATCGCGTTCAGACGTTTTTGTGCCTGTTTAGC < CP009273/775875‑775810 AATACCCTGGTACTGATGGCGCTAAACAGGCACAAAAACGTCTGAACGCGATGTAATGCATAACACAC > 1:21391505/1‑68 ATACCCTGGTACTGATGGCGCTAAACAGGCACAAAAACGTCTGAACGCGATGTAATGCATAACACACG > 1:10689685/1‑68 ATACCCTGGTACTGATGGCGCTAAACAGGCACAAAAACGTCTGAACGCGATGTAATGCATAACACACG > 1:17012733/1‑68 ATACCCTGGTACTGATGGCGCTAAACAGGCACAAAAACGTCTGAACGCGATGTAATGCATAACACACG > 1:21948351/1‑68 ATACCCTGGTACTGATGGCGCTAAACAGGCACAAAAACGTCTGAACGCGATGTAATGCATAACACACG < 1:23326102/68‑1 ATACCCTGGTACTGATGGCGCTAAACAGGCACAAAAACGTCTGAACGCGATGTAATGCATAACACACG > 1:23641989/1‑68 ATACCCTGGTACTGATGGCGCTAAACAGGCACAAAAACGTCTGAACGCGATGTAATGCATAACACACG > 1:27310584/1‑68 ATACCCTGGTACTGATGGCGCTAAACAGGCACAAAAACGTCTGAACGCGATGTAATGCATAACACACG > 1:30380925/1‑68 ATACCCTGGTACTGATGGCGCTAAACAGGCACAAAAACGTCTGAACGCGATGTAATGCATAACACACG < 1:14255280/68‑1 ATACCCTGGTACTGATGGCGCTAAACAGGCACAAAAACGTCTGAACGCGATGTAATGCATAACACACG > 1:3456284/1‑68 ATACCCTGGTACTGATGGCGCTAAACAGGCACAAAAACGTCTGAACGCGATGTAATGCATAACACACG > 1:34844538/1‑68 ATACCCTGGTACTGATGGCGCTAAACAGGCACAAAAACGTCTGAACGCGATGTAATGCATAACACACG > 1:5428/1‑68 ATACCCTGGTACTGATGGCGCTAAACAGGCACAAAAACGTCTGAACGCGATGTAATGCATAACACACG < 1:7280063/68‑1 ATACCCTGGTACTGATGGCGCTAAACAGGCACAAAAACGTCTGAACGCGATGTAATGCATAACACACG > 1:9521622/1‑68 ATACCCTGGTACTGATGGCGCTAAACAGGCACAAAAACGTCTGAACGCGATGTAATGCATAACACAC > 1:20633112/1‑67 TACCCTGGTACTGATGGCGCTAAACAGGCACAAAAACGTCTGCACGCGATGTAATGCATAACACACG > 1:7377591/1‑67 TACCCTGGTACTGATGGCGCTAAACAGGCACAAAAACGTCTGAACGCGATGTAATGCATAACACACGA < 1:6922698/68‑1 TACCCTGGTACTGATGGCGCTAAACAGGCACAAAAACGTCTGAACGCGATGTAATGCATAACACACG > 1:27956617/1‑67 ACCCTGGTACTGATGGCGCTAAACAGGCACAAAAACGTCTGAACGCGATGTAATGCATAACACACGAC < 1:31339381/68‑1 ACCCTGGTACTGATGGCGCTAAACAGGCACAAAAACGTCTGAACGCGATGTAATGCATAACACACGAC < 1:101471/68‑1 ACCCTGGTACTGATGGCGCTAAACAGGCACAAAAACGTCTGAACGCGATGTAATGCATAACACACGAC < 1:11724261/68‑1 ACCCTGGTACTGATGGCGCTAAACAGGCACAAAAACGTCTGAACGCGATGTAATGCATAACACACGAC < 1:19609849/68‑1 ACCCTGGTACTGATGGCGCTAAACAGGCACAAAAACGTCTGAACGCGATGTAATGCATAACACACGA > 1:27560190/1‑67 CCCTGGTACTGATGGCGCTAAACAGGCCCAAAAACGTCTGCACGCGATGTAATGCATAACCCACGACC > 1:17378668/1‑68 CCCTGGTACTGATGGCGCTAAACAGGCACAAAAACGTCTGAACGCGATGTAATGCATAACACACGACa > 1:24641696/1‑67 CCCTGGTACTGATGGCGCTAAACAGGCACAAAAACGTCTGAACGCGATGTAATGCATAACACACGACC > 1:29841650/1‑68 CCCTGGTACTGATGGCGCTAAACAGGCACAAAAACGTCTGAACGCGATGTAATGCATAACACACGACC > 1:27852439/1‑68 CCCTGGTACTGATGGCGCTAAACAGGCACAAAAACGTCTGAACGCGATGTAATGCATAACACACGACC > 1:3501540/1‑68 CCCTGGTACTGATGGCGCTAAACAGGCACAAAAACGTCTGAACGCGATGTAATGCATAACACACGACC > 1:31898729/1‑68 CCCTGGTACTGATGGCGCTAAACAGGCACAAAAACGTCTGAACGCGATGTAATGCATAACACACGACC > 1:31961362/1‑68 CCCTGGTACTGATGGCGCTAAACAGGCACAAAAACGTCTGAACGCGATGTAATGCATAACACACGACC > 1:3281877/1‑68 CCCTGGTACTGATGGCGCTAAACAGGCACAAAAACGTCTGAACGCGATGTAATGCATAACACACGACC > 1:3323024/1‑68 CCCTGGTACTGATGGCGCTAAACAGGCACAAAAACGTCTGAACGCGATGTAATGCATAACACACGACC > 1:33814039/1‑68 CCCTGGTACTGATGGCGCTAAACAGGCACAAAAACGTCTGAACGCGATGTAATGCATAACACACGACC > 1:34029867/1‑68 CCCTGGTACTGATGGCGCTAAACAGGCACAAAAACGTCTGAACGCGATGTAATGCATAACACACGACC > 1:34437186/1‑68 CCCTGGTACTGATGGCGCTAAACAGGCACAAAAACGTCTGAACGCGATGTAATGCATAACACACGACC > 1:1321878/1‑68 CCCTGGTACTGATGGCGCTAAACAGGCACAAAAACGTCTGAACGCGATGTAATGCATAACACACGACC > 1:18375783/1‑68 CCCTGGTACTGATGGCGCTAAACAGGCACAAAAACGTCTGAACGCGATGTAATGCATAACACACGACC > 1:36632141/1‑68 CCCTGGTACTGATGGCGCTAAACAGGCACAAAAACGTCTGAACGCGATGTAATGCATAACACACGACC > 1:3726498/1‑68 CCCTGGTACTGATGGCGCTAAACAGGCACAAAAACGTCTGAACGCGATGTAATGCATAACACACGACC > 1:4333601/1‑68 CCCTGGTACTGATGGCGCTAAACAGGCACAAAAACGTCTGAACGCGATGTAATGCATAACACACGACC > 1:4650263/1‑68 CCCTGGTACTGATGGCGCTAAACAGGCACAAAAACGTCTGAACGCGATGTAATGCATAACACACGACC > 1:4855416/1‑68 CCCTGGTACTGATGGCGCTAAACAGGCACAAAAACGTCTGAACGCGATGTAATGCATAACACACGACC > 1:6498309/1‑68 CCCTGGTACTGATGGCGCTAAACAGGCACAAAAACGTCTGAACGCGATGTAATGCATAACACACGACC > 1:12245654/1‑68 CCCTGGTACTGATGGCGCTAAACAGGCACAAAAACGTCTGAACGCGATGTAATGCATAACACACGACC > 1:7176193/1‑68 CCCTGGTACTGATGGCGCTAAACAGGCACAAAAACGTCTGAACGCGATGTAATGCATAACACACGACC > 1:7570325/1‑68 CCCTGGTACTGATGGCGCTAAACAGGCACAAAAACGTCTGAACGCGATGTAATGCATAACACACGACC > 1:7721003/1‑68 CCCTGGTACTGATGGCGCTAAACAGGCACAAAAACGTCTGAACGCGATGTAATGCATAACACACGACC > 1:11014073/1‑68 CCCTGGTACTGATGGCGCTAAACAGGCACAAAAACGTCTGAACGCGATGTAATGCATAACACACGACC > 1:26387614/1‑68 CCCTGGTACTGATGGCGCTAAACAGGCACAAAAACGTCTGAACGCGATGTAATGCATAACACACGACC > 1:22747545/1‑68 CCCTGGTACTGATGGCGCTAAACAGGCACAAAAACGTCTGAACGCGATGTAATGCATAACACACGACC > 1:15877782/1‑68 CCCTGGTACTGATGGCGCTAAACAGGCACAAAAACGTCTGAACGCGATGTAATGCATAACACACGACC > 1:2375730/1‑68 CCCTGGTACTGATGGCGCTAAACAGGCACAAAAACGTCTGAACGCGATGTAATGCATAACACACGACC > 1:1968518/1‑68 CCCTGGTACTGATGGCGCTAAACAGGCACAAAAACGTCTGAACGCGATGTAATGCATAACACACGACC > 1:24062869/1‑68 CCCTGGTACTGATGGCGCTAAACAGGCACAAAAACGTCTGAACGCGATGTAATGCATAACACACGACC > 1:24213395/1‑68 CCCTGGTACTGATGGCGCTAAACAGGCACAAAAACGTCTGAACGCGATGTAATGCATAACACACGACC > 1:19324444/1‑68 CCCTGGTACTGATGGCGCTAAACAGGCACAAAAACGTCTGAACGCGATGTAATGCATAACACACGACC > 1:25214395/1‑68 CCCTGGTACTGATGGCGCTAAACAGGCACAAAAACGTCTGAACGCGATGTAATGCATAACACACGACC > 1:25767922/1‑68 CCCTGGTACTGATGGCGCTAAACAGGCACAAAAACGTCTGAACGCGATGTAATGCATAACACACGACC > 1:26223068/1‑68 CCCTGGTACTGATGGCGCTAAACAGGCACAAAAACGTCTGAACGCGATGTAATGCATAACACACGACC > 1:17694412/1‑68 CCCTGGTACTGATGGCGCTAAACAGGCACAAAAACGTCTGAACGAGATGTAATGCATAACACACGACC > 1:28064717/1‑68 CCCTGGTACTGATGGCGCCAAACAGGCACAAAAACGTCTGAACGCGATGTAATGCATAACACACGACC > 1:398298/1‑68 CCCTGGTACTGATCGCGCTAAACAGGCACAAAAACGTCTGAACGCGATGTAATGCATAACACACGACC > 1:15407065/1‑68 CCCGGGTACTGATGGCGCTAAACAGGCACAAAAACGTCTGAACGCGATGTAATGCATAACACACGACC > 1:35958986/1‑68 CCTGGTACTGATGGCGCTAAACAGGCACAAAAACGTCTGAACGCGATGTAATGCATAACACACGACCA > 1:21552351/1‑68 CTGGTACTGATGGCGCTAAACAGGCACAAAAACGTCTGAACGCGATGTAATGCATAACACACGACCAG > 1:6021366/1‑68 TGGTACTGATGGCGCTAAACAGGCACAAAAACGTCTGAACGCGATGTAATGCATAACACACGACCAGA < 1:1861583/68‑1 TGGTACTGATGGCGCTAAACAGGCACAAAAACGTCTGAACGCGATGTAATGCATAACACACGACCAGA < 1:15519138/68‑1 GGTACTGATGGCGCTAAACAGGCACAAAAACGTCTGAACGCGATGTAATGCATAACACACGACCAGAA > 1:8891803/1‑68 GGTACTGATGGCGCTAAACAGGCACAAAAACGTCTGAACGCGATGTAATGCATAACACACGACCAGAA > 1:11268334/1‑68 GGTACTGATGGCGCTAAACAGGCACAAAAACGTCTGAACGCGATGTAATGCATAACACACGACCAGAA > 1:23028719/1‑68 TGGCGCTAAACAGGCACAAAAACGTCTGAACGCGATGTAATGCATAACACACGACCAGAAATAATGCG < 1:28904898/68‑1 GGCACAAAAACGTCTGAACGCGATGTAATGCATAACACACGACCAGAAATAATGCGACTTCTGGTCGT > 1:7785136/1‑68 GCGATGTAATGCATAACACACGACCAGAAATAATGCGACTTCTGGTCGTGTGTTATGCATTACATCGC > 1:9843252/1‑68 GTAATGCATAACACACGACCAGAAATAATGCGACTTCTGGTCGTGTGTTATGCATTACATCGCGTTCA > 1:3293274/1‑68 ATGCATAACACACGACCAGAAATAATGCGACTTCTGGTCGTGTGTTATGCATTACATCGCGTTCAGAC > 1:28689932/1‑68 GCATAACACACGACCAGAAATAATGCGACTTCTGGTCGTGTGTTATGCATTACATCGCGTTCAGACGT > 1:15270529/1‑68 GCATAACACACGACCAGAAATAATGCGACTTCTGGTCGTGTGTTATGCATTACATCGCGTTCAGACGT > 1:24485712/1‑68 GCATAACACACGACCAGAAATAATGCGACTTCTGGTCGTGTGTTATGCATTACATCGCGTTCAGACGT > 1:20238219/1‑68 ATAACACACGACCAGAAATAATGCGACTTCTGGTCGTGTGTTATGCATTACATCGCGTTCAGACGTTT > 1:5575504/1‑68 ACACGACCAGAAATAATGCGACTTCTGGTCGTGTGTTATGCATTACATCGCGTTCAGACGTTTTTGT > 1:28685236/1‑67 ACACGACCAGAAATAATGCGACTTCTGGTCGTGTGTTATGCATTACATCGCGTTCAGACGTTTTTGT > 1:3567491/1‑67 ACACGACCAGAAATAATGCGACTTCTGGTCGTGTGTTATGCATTACATCGCGTTCAGACGTTTTTGT > 1:4358243/1‑67 ACACGACCAGAAATAATGCGACTTCTGGTCGTGTGTTATGCATTACATCGCGTTCAGACGTTTTTGT > 1:34304226/1‑67 ACACGACCAGAAATAATGCGACTTCTGGTCGTGTGTTATGCATTACATCGCGTTCAGACGTTTTTGT > 1:17175343/1‑67 ACACGACCAGAAATAATGCGACTTCTGGTCGTGTGTTATGCATTACATCGCGTTCAGACGTTTTTGT > 1:36270645/1‑67 CACGACCAGAAATAATGCGACTTCTGGTCGTGTGTTATGCATTACATCGCGTTCAGACGTTTTTGTG < 1:5631519/67‑1 CACGACCAGAAATAATGCGACTTCTGGTCGTGTGTTATGCATTACATCGCGTTCAGACGTTTTTGTG < 1:15055114/67‑1 CACGACCAGAAATAATGCGACTTCTGGTCGTGTGTTATGCATTACATCGCGTTCAGACGTTTTTGTG < 1:20680792/67‑1 CACGACCAGAAATAATGCGACTTCTGGTCGTGTGTTATGCATTACATCGCGTTCAGACGTTTTTGTG < 1:12715549/67‑1 CACCACCAGAAATTATGCGACTTCTGGTCGTGTGTTATGCATTACATCGCGTTCAGACGTTTTTGag < 1:19552103/67‑3 ACGACCAGAAATAATGCGACTTCTGGTCGTGTGTTATGCATTACATCGCGTTCAGACGTTTTTGTG > 1:33635604/1‑66 ACGACCAGAAATAATGCGACTTCTGGTCGTGTGTTATGCATTACATCGCGTTCAGACGTTTTTGTG > 1:13055764/1‑66 CCAGAAATAATGCGACTTCTGGTCGTGTGTTATTCATTACATCGCGTTCAGACGTTTTTGTGCCTGT < 1:22469888/67‑1 CCAGAAATAATGCGACTTCTGGTCGTGTGTTATGCATTACATCGCGTTCAGACGTTTTTGTGCCTGT < 1:6218800/67‑1 CCAGAAATAATGCGACTTCTGGTCGTGTGTTATGCATTACATCGCGTTCAGACGTTTTTGTGCCTGT < 1:8444075/67‑1 CCAGAAATAATGCGACTTCTGGTCGTGTGTTATGCATTACATCGCGTTCAGACGTTTTTGTGCCTGT < 1:25970580/67‑1 CCAGAAATAATGCGACTTCTGGTCGTGTGTTATGCATTACATCGCGTTCAGACGTTTTTGTGCCTGT < 1:36193815/67‑1 CCAGAAATAATGCGACTTCTGGTCGTGTGTTATGCATTACATCGCGTTCAGACGTTTTTGTGCCTGT < 1:36359550/67‑1 AATAATGCGACTTCTGGTCGTGTGTTATGCATTACATCGCGTTCAGACGTTTTTGTGCCTGTTTAG < 1:24018138/66‑1 AAATACCCTGGTACTGATGGCGCTAAACAGGCACAAAAACGTCTGAACGCGATGTAATGCATAACACACGACCAGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/775789‑775865‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acacgaccagaaATAATGCGACTTCTGGTCGTGTGTTATGCATTACATCGCGTTCAGACGTTTTTGTGCCTGTTTAGC < CP009273/775875‑775810 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |