| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 1023817 = | NA (NA) | 7 (0.020) | 5/84 | NT | NA | intergenic (+2/+43) | yccU/hspQ | putative CoA‑binding protein/heat shock protein involved in degradation of mutant DnaA; hemimethylated oriC DNA‑binding protein |
| ? | CP009273 | 1023851 = | NA (NA) | intergenic (+36/+9) | yccU/hspQ | putative CoA‑binding protein/heat shock protein involved in degradation of mutant DnaA; hemimethylated oriC DNA‑binding protein | |||||
Only 100 of 121 total aligned reads displayed.
CGCAAACAACTCCAGGCCCCGCGTCTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCTTCCGGGGATTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/1023895‑1023817‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccttccggggatttGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCATCC > CP009273/1023851‑1023917 CGCAAACAACTCCAGGCCCCGCGTCTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCT > 1:10002163/1‑68CGCAAACAACTCCAGGCCCCGCGTCTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCT > 1:21706247/1‑68CGCAAACAACTCCAGGCCCCGCGTCTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCT > 1:11863457/1‑68CGCAAACAACTCCAGGCCCCGCGTCTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCT > 1:4076708/1‑68CGCAAACAACTCCAGGCCCCGCGTCTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCT > 1:8063220/1‑68 CAAACAACTCCAGGCCCCGCGTCTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCTT > 1:15879808/1‑67 AAACAACTCCAGGCCCCGCGTCTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCTTCC < 1:14475393/68‑1 ACAACTCCAGGCCCCGCGTCTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCTTCCGG > 1:5963942/1‑68 ACAACTCCAGGCCCCGCGTCTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCTTCCGG > 1:407373/1‑68 ACAACTCCAGGCCCCGCGTCTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCTTCCGG > 1:35433765/1‑68 ACAACTCCAGGCCCCGCGTCTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCTTCCGG > 1:34463699/1‑68 ACAACTCCAGGCCCCGCGTCTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCTTCCGG > 1:27841709/1‑68 ACAACTCCAGGCCCCGCGTCTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCTTCCGG > 1:26539289/1‑68 ACAACTCCAGGCCCCGCGTCTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCTTCCGG > 1:22988737/1‑68 ACAACTCCAGGCCCCGCGTCTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCTTCCGG > 1:2292467/1‑68 ACAACTCCAGGCCCCGCGTCTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCTTCCGG > 1:22034543/1‑68 ACAACTCCAGGCCCCGCGTCTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCTTCCGG > 1:10004610/1‑68 ACAACTCCAGGCCCCGCGTCTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCTTCCGG > 1:11377356/1‑68 CAACTCCAGGCCCCGCGTCTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCTTCCGGG > 1:30064335/1‑68 CAACTCCAGGCCCCGCGTCTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCTTCCGGG > 1:5663481/1‑68 AACTCCAGGCCCCGCGGCTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCTTCCGGGG < 1:28434678/68‑1 ACTCCAGGCCCCGCGGCTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGTCTTCCGGGGA < 1:28403930/68‑1 CTCCAGGCCCCGCGTCTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCTTCCGGGGAT < 1:15857469/68‑1 CTCCAGGCCCCGCGTCTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCTTCCGGGGAT < 1:33648632/68‑1 CTCCAGGCCCCGCGTCTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCTTCCGGGGAT > 1:30989427/1‑68 CTCCAGGCCCCGCGTCTGCGTAACAAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCTTCAGGGGAT > 1:36395034/1‑68 TCCAGGCCCCGCGTCTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCTTCCGGGGATT < 1:24956399/68‑1 TCCAGGCCCCGCGTCTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCTTCCGGGGATT > 1:35796408/1‑68 TCCAGGCCCCGCGTCTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCTTCCGGGGATT < 1:1352728/68‑1 CCAGGCCCCGCGTCTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCTTCCGGGGATTT < 1:14185616/68‑1 CCAGGCCCCGCGTCTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCTTCCGGGGATTT > 1:340271/1‑68 CCAGGCCCCGCGTCTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCTTCCGGGGATTT > 1:22945091/1‑68 CCAGGCCCCGCGTCTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCTTCAGGGGATTT > 1:32228543/1‑68 CCAGGCCCCGCGTCTGCGTAACTAATCCCTGAACAAATCCCCGGAACGTTTTTGCCTTCCGGGGATTT < 1:19778979/68‑1 CCAGGCCCCGCGTCGGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCTTCCGGGGATTT > 1:18169848/1‑68 CCCCGCGTCTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCTTCCGGGGATTTGT < 1:27017467/65‑1 GCGTCTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCTTCCGGGGATTTGTTCAGGGA < 1:21093221/68‑1 CTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCTTCCGGGGATTTGTTCAGGGATTAG < 1:18723037/68‑1 CTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCTTCCGGGGATTTGTTCAGGGATTAG < 1:18681284/68‑1 CTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCTTCCGGGGATTTGTTCAGGGATTA < 1:36246942/67‑1 GCGTATCTAAACCCTCACCAAATCCCCGCAAGGTTTTTGCCATCCGGGGATTTGTTCAGGGATTAGT < 1:11642585/67‑1 GTAACAAATCCCTGAACAAAACCCCGGAAGGGTTTTGCCTCCCGGGGATTTGTTCAGGGATTAGTTAC < 1:36291879/68‑1 CCTTCCGGGGATTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTG < 1:17669859/68‑1 CTTCCGGGGATTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGC < 1:33250447/68‑1 CTTCCGGGGATTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGC < 1:30721745/68‑1 CTTCCGGGGATTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGC < 1:31607741/68‑1 CTTCCGGGGATTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGC < 1:13865707/68‑1 CTTCCGGGGATTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGC < 1:416406/68‑1 CTTCCGGGGATTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGC < 1:16788997/68‑1 CTTCCGGGGATTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGC < 1:16771776/68‑1 CTTCCGGGGATTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGC < 1:7955620/68‑1 CTTCCGGGGATTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGC < 1:10396904/68‑1 CTTCCGGGGATTTGTTCAGGGAATAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGC < 1:7951441/68‑1 TTCCGGGGATTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCG < 1:9748105/68‑1 TCCGGGGATTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCG > 1:11125045/1‑67 GGGGATTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAG < 1:33971057/68‑1 GGGGATTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAG < 1:32673093/68‑1 GGGGATTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAG < 1:9364960/68‑1 GGGGATTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAG < 1:30461311/68‑1 GGGGATTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAG < 1:22375176/68‑1 GGGGATTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCA > 1:16805872/1‑67 GGGGATTTGTTCAGGGAGTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAG < 1:24251104/68‑1 GGGATTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCA > 1:13772618/1‑66 GGGATTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCA > 1:14490726/1‑66 GGGATTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCA > 1:9392430/1‑66 GGGATTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCA > 1:1552131/1‑66 GGATTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGC < 1:7370063/67‑1 GGATTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGC < 1:16179441/67‑1 GATTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCT < 1:34109100/67‑1 TTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATTGTCTGCGCCAGCTCAT < 1:30563272/68‑1 TTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCAT < 1:7065114/68‑1 TTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCAT < 1:10911202/68‑1 TTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCAT < 1:13559098/68‑1 TTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCA < 1:162783/67‑1 TTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCA < 1:26135856/67‑1 TTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCA < 1:29248850/67‑1 TTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCA < 1:117063/67‑1 TTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCA < 1:23472749/67‑1 TTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCA < 1:29728490/67‑1 TTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCA > 1:3787673/1‑67 TTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCA < 1:20855134/67‑1 TTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCGGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCAT < 1:22005063/68‑1 TTTGTTCAGGGAGTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCA < 1:28670169/67‑1 TTGTTCTGGGATTAGTAACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCATC < 1:13423083/68‑1 TTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCATC < 1:14989832/68‑1 TTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCATC < 1:8161197/68‑1 TTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCATC < 1:18727633/68‑1 TTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCATC < 1:529417/68‑1 TTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCATC < 1:24754551/68‑1 TTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCATC < 1:3406321/68‑1 TTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCATC < 1:27123479/68‑1 TTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCATC < 1:13357820/68‑1 TTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCATC < 1:31649167/68‑1 TTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCATC < 1:30034387/68‑1 TTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCATC < 1:30632513/68‑1 TTGTACAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCATC < 1:9702036/68‑1 TGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCATCC > 1:5448369/1‑68 TGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCATCC < 1:5708788/68‑1 TGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCATCC > 1:33114453/1‑68 TGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCATCC > 1:31054363/1‑68 CGCAAACAACTCCAGGCCCCGCGTCTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCTTCCGGGGATTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/1023895‑1023817‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccttccggggatttGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCATCC > CP009273/1023851‑1023917 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |