| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 1023817 = | NA (NA) | 7 (0.020) | 5/84 | NT | NA | intergenic (+2/+43) | yccU/hspQ | putative CoA‑binding protein/heat shock protein involved in degradation of mutant DnaA; hemimethylated oriC DNA‑binding protein |
| ? | CP009273 | 1023851 = | NA (NA) | intergenic (+36/+9) | yccU/hspQ | putative CoA‑binding protein/heat shock protein involved in degradation of mutant DnaA; hemimethylated oriC DNA‑binding protein | |||||
Only 100 of 464 total aligned reads displayed.
GGGTTAAATGTGGTGATGGATCGCTGCCCGGCTATTGAGATCCCTCGCCTGGGCCTGGCCAAATAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGG > CP009273/1023750‑1023884 | gggTTAAATGTGGTGATGGATCGCTGCCCGGCTATTGAGATCCCTCGCCTGGGCCTGGCCAAATaaaa < 1:28535650/68‑1 (MQ=255)gggTTAAATGTGGTGATGGATCGCTGCCCGGCTATTGAGATCCCTCGCCTGGGCCTGGCCAAATaaaa > 1:23280185/1‑68 (MQ=255)gggTTAAATGTGGTGATGGATCGCTGCCCGGCTATTGAGATCCCTCGCCTGGGCCTGGCCAAATaaaa > 1:3596368/1‑68 (MQ=255) gatgagctggcgcagaccatccgcaaacaactccaggccccgcgtctgcgtaactaatccctgtacaa < 1:9702036‑M1/2‑1 (MQ=255) gatgagctggcgcagaccatccgcaaacaactccaggccccgcgtctgcgtaactaatccctgaacaa < 1:30034387‑M1/2‑1 (MQ=255) gatgagctggcgcagaccatccgcaaacaactccaggccccgcgtctgcgtaactaatccctgaacaa < 1:30632513‑M1/2‑1 (MQ=255) gatgagctggcgcagaccatccgcaaacaactccaggccccgcgtctgcgtaactaatccctgaacaa < 1:24754551‑M1/2‑1 (MQ=255) gTTAAATGTGGTGATGGATCGCTGCCCGGCTATTGAGATCCCTCGCCTGGGCCTGGCCAAATaaaaaa > 1:11192719/1‑68 (MQ=255) atgagctggcgcagaccatccgcaaacaactccaggccccgcgtctgcgtaactaatccctgaacaaa < 1:10911202‑M1/3‑1 (MQ=255) tgagctggcgcagaccatccgcaaacacctccaggccccgcgtctgcgtaactaatccctgaacaaa < 1:36769045‑M1/3‑1 (MQ=255) tgagctggcgcagaccatccgcaaacaactccaggccccgcgtctgcgtaactaatccctgaacaaa < 1:162783‑M1/3‑1 (MQ=255) tgagctggcgcagaccatccgcaaacaactccaggccccgcgtctgcgtaactaatccctgaacaaa < 1:29728490‑M1/3‑1 (MQ=255) tAAATGTGGTGATGGATCGCTGCCCGGCTGTTGAGATCCCTCGCCTGGGCCTGGCCAAATAAAAAAt > 1:19357789/1‑67 (MQ=255) agctggcgcagaccatccgcaaacaactccaggccccgcgtctgcgtaactaatccctgaacAAATc < 1:34109100‑M1/5‑1 (MQ=255) gctggcgcagaccatccgcaaacaactccaggccccgcgtctgcgtaactaatccctgaacAAATcc < 1:7370063‑M1/6‑1 (MQ=255) gctggcgcagaccatccgcaaacaactccaggccccgcgtctgcgtaactaatccctgaacAAATcc < 1:13405102‑M1/6‑1 (MQ=255) ctggcgcagaccatccgcaaacaactccaggccccgcgtctgcgtaactaatccctgaacAAATcccc < 1:32673093‑M1/8‑1 (MQ=255) ctggcgcagaccatccgcaaacaactccaggccccgcgtctgcgtaactaatccctgaacAAATcccc < 1:22375176‑M1/8‑1 (MQ=255) tgtgGTGATGGATCGCTGCCCGGCTATTGAGATCCCTCGCCTGGGCCTGGCCAAATAAAAAATCCCCg > 1:664223/1‑68 (MQ=255) tgtgGTGATGGATCGCTGCCCGGCTATTGAGATCCCTCGCCTGGGCCTGGCCAAATAAAAAATCCCCg > 1:23955077/1‑68 (MQ=255) tgtgGTGATGGATCGCTGCCCGGCTATTGAGATCCCTCGCCTGGGCCTGGCCAAATAAAAAATCCCCg > 1:346366/1‑68 (MQ=255) tgtgGTGATGGATCGCTGCCCGGCTATTGAGATCCCTCGCCTGGGCCTGGCCAAATAAAAAATCCCCg > 1:19912018/1‑68 (MQ=255) tggcgcagaccatccgcaaacaactccaggccccgcgtctgcgtaactaatccctgaacAAATccc > 1:14490726‑M1/60‑66 (MQ=255) tggcgcagaccatccgcaaacaactccaggccccgcgtctgcgtaactaatccctgaacAAATccc > 1:30317901‑M1/60‑66 (MQ=255) ggtgATGGATCGCTGCCCGGCTATTGAGATCCCTCGCCTGGGCCTGGCCAAATAAAAAATCCCCGGaa > 1:867854/1‑68 (MQ=255) gcagaccatccgcaaacaactccaggccccgcgtctgcgtaactaatccctgaacAAATCCCCGGAAg < 1:13865707‑M1/13‑1 (MQ=255) gcagaccatccgcaaacaactccaggccccgcgtctgcgtaactaatccctgaacAAATCCCCGGAAg < 1:10396904‑M1/13‑1 (MQ=255) tgATGGATCGCTGCCCGGCTATTGAGATCCCTCGCCTGGGCCTGGCCAAATAAAAAATCCCCGGAAg > 1:31700810/1‑67 (MQ=255) tgATGGATCGCTGCCCGGCTATTGAGATCCCTCGCCTGGGCCTGGCCAAATAAAAAATCCCCGGAAg > 1:12884247/1‑67 (MQ=255) tGGATCGCTGCCCGGCTATTGAGATCCCTCGCCTGGGCCTGGCCAAATAAAAAATCCCCGGAAGGCaa > 1:25247699/1‑68 (MQ=255) aTCGCTGCCCGGCTATTGAGATCCCTCGCCTGGGCCTGGCCAAATAAAAAATCCCCGGAAGGCaaaa > 1:14725140/1‑67 (MQ=255) aTCGCTGCCCGGCTATTGAGATCCCTCGCCTGGGCCTGGCCAAATAAAAAATCCCCGGAAGGCaaaa > 1:11486802/1‑67 (MQ=255) aTCGCTGCCCGGCTATTGAGATCCCTCGCCTGGGCCTGGCCAAATAAAAAATCCCCGGAAGGCaaaa > 1:8170159/1‑67 (MQ=255) aTCGCTGCCCGGCTATTGAGATCCCTCGCCTGGGCCTGGCCAAATAAAAAATCCCCGGAAGGCaaaa > 1:30886342/1‑67 (MQ=255) aTCGCTGCCCGGCTATTGAGATCCCTCGCCTGGGCCTGGCCAAATAAAAAATCCCCGGAAGGCaaaa > 1:17189526/1‑67 (MQ=255) aTCGCTGCCCGGCTATTGAGATCCCTCGCCTGGGCCTGGCCAAATAAAAAATCCCCGGAAGGCaaaa > 1:5305515/1‑67 (MQ=255) aTCGCTGCCCGGCTATTGAGATCCCTCGCCTGGGCCTGGCCAAATAAAAAATCCCCGGAAGGCaaaa > 1:15150584/1‑67 (MQ=255) gCTGCCCGGCTATTGAGATCCCTCGCCTGGGCCTGGCCAAATAAAAAATCCCCGGAAGGCAAAAACCt > 1:27694542/1‑68 (MQ=255) tGCCCGGCTATTGAGATCCCTCGCCTGGGCCTGGCCAAATAAAAAATCCCCGGAAGGCAAAAACCtt > 1:21667724/1‑67 (MQ=255) gCCCGGCTATTGAGATCCCTCGCCTGGGCCTGGCCAAATAAAAAATCCCCGGAAGGCAAAAACCTTcc < 1:257383/68‑1 (MQ=255) cccGGCTATTGAGATCCCTCGCCTGGGCCTGGCCAAATAAAAAATCCCCGGAAGGCAAAAACCTTCCg > 1:11908123/1‑68 (MQ=255) cTATTGAGATCCCTCGCCTGGGCCTGGCCAAATAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGa < 1:21070133/67‑1 (MQ=255) cTATTGAGATCCCTCGCCTGGGCCTGGCCAAATAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGa < 1:1371451/67‑1 (MQ=255) tATTGAGATCCCTCGCCTGGGCCTGGCCAAATAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGAtt > 1:31222591/1‑68 (MQ=255) ttGAGATCCCTCGCCTGGGCCTGGCCAAATAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTg < 1:2667639/68‑1 (MQ=255) tGAGATCCCTCGCCTGGGCCTGGCCAAATAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGt < 1:6900375/68‑1 (MQ=255) tGAGATCCCTCGCCTGGGCCTGGCCAAATAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGt < 1:35039679/68‑1 (MQ=255) tGAGATCCCTCGCCTGGGCCTGGCCAAATAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGt < 1:4869471/68‑1 (MQ=255) tGAGATCCCTCGCCTGGGCCTGGCCAAATAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGt < 1:23717894/68‑1 (MQ=255) tGAGATCCCTCGCCTGGGCCTGGCCAAATAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGt < 1:20280502/68‑1 (MQ=255) tGAGATCCCTCGCCTGGGCCTGGCCAAATAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGt < 1:33348898/68‑1 (MQ=255) tGAGATCCCTCGCCTGGGCCTGGCCAAATAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGt > 1:4050213/1‑68 (MQ=255) tGAGATCCCTCGCCTGGGCCTGGCCAAATAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGt > 1:22756338/1‑68 (MQ=255) tGAGAGCCCTCGCCTGGGCCTGGCCAAATAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGt < 1:18813070/68‑1 (MQ=255) tGAGAACCCTCGCCTGGGCCTGGCCAAATAAAAAAACCCCGGAAGGCAAAAACCTTCCGGGGATTTGt < 1:5522040/68‑1 (MQ=255) agaTCCCTCGCCTGGGCCTGGCCAAATAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGTTc > 1:4537614/1‑68 (MQ=255) agaTCCCTCGCCTGGGCCTGGCCAAATAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGTTc > 1:10774624/1‑68 (MQ=255) agaTCCCTCGCCTGGGCCTGGCCAAATAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGTTc > 1:27855688/1‑68 (MQ=255) agaTCCCTCGCCTGGGCCTGGCCAAATAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGTTc > 1:20635817/1‑68 (MQ=255) agaTCCCTCGCCTGGGCCTGGCCAAATAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGTTc > 1:24327154/1‑68 (MQ=255) tCCCTCGCCTGGGCCTGGCCATATAAAAAATCCCCGGAAGGCAAAAACCTTGCGGGGATTTGTTCAgg < 1:27271060/68‑1 (MQ=255) tCCCTCGCCTGGGCCTGGCCAAATAAAAAATCCCCGGAAGGCAAAACCCTTCCGGGGATTTGGTCAgg > 1:19518071/1‑68 (MQ=255) tCCCTCGCCTGGGCCTGGCCAAATAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGTTCAgg > 1:12233472/1‑68 (MQ=255) tCCCTCGCCGGGGCCTGGCCAAATAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGTTCAgg < 1:7766590/68‑1 (MQ=255) cccTCGCCTGGGCCTGGCCAAATAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGTTCAggg > 1:8032162/1‑68 (MQ=255) ccTCGCCTGGGCCTGGCCAAATAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGTTCAGGGa < 1:28127749/68‑1 (MQ=255) ccTCGCCTGGGCCTGGCCAAATAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGTTCAGGGa < 1:1685143/68‑1 (MQ=255) ccTCGCCTGGGCCTGGCCAAATAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGTTCAGGGa < 1:3189929/68‑1 (MQ=255) ccTCGCCTGGGCCTGGCCAAATAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGTTCAGGGa > 1:28194448/1‑68 (MQ=255) ccTCGCCTGGGCCTGGCCAAATAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGTTCAGGGa < 1:35492532/68‑1 (MQ=255) ccTCGCCTGGGCCTGGCCAAATAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGTTCAGGGa < 1:21440349/68‑1 (MQ=255) cGCCTGGGCCTGGCCAAATAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGTTCAGGGATTa < 1:35771443/68‑1 (MQ=255) cGCCTGGGCCTGGCCAAATAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGTTCAGGGATTa < 1:4217035/68‑1 (MQ=255) cGCCTGGGCCTGGCCAAATAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGTTCAGGGATTa < 1:32990500/68‑1 (MQ=255) gcctgggcctggCCAAATAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGTTCAGGGATTAg < 1:16156422/68‑1 (MQ=255) cctgggcctggCCAAATAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGTTCAGGGATTAGt > 1:15450636/1‑68 (MQ=255) cctgggcctggCCAAATAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGTTCAGGGATTAGt > 1:3073516/1‑68 (MQ=255) cctgggcctggCCAAATAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGTTCAGGGATTAGt > 1:16750706/1‑68 (MQ=255) cctgggcctggCCAAATAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGTTCAGGGATTAGt > 1:6125229/1‑68 (MQ=255) cctgggcctggCCAAATAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGTTCAGGGATTAGt > 1:17522328/1‑68 (MQ=255) cctgggcctggCCAAATAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGTTCAGGGAATAGt > 1:33599702/1‑68 (MQ=255) ctgggcctggCCAAATAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGTTCAGGGATTAGt < 1:1576254/67‑1 (MQ=255) tgggcctggCCAAATAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGTTCAGGGATTAGtt > 1:32400751/1‑67 (MQ=255) gtaactaatccctgaacAAATCCCCGGAAGGCAAAAACCGTCCGGGGTTTTGTTCAGGGATTAGTTAc < 1:9032596‑M1/51‑1 (MQ=255) gcctggCCAAATAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGTTCAGGGATTAGTTACGc > 1:17973910/1‑68 (MQ=255) cctggCCAAATAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGTTCAGGGATTAGTTACGCa > 1:2585132/1‑68 (MQ=255) cctggCCAAATAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGTTCAGGGATTAGTTACGCa > 1:22987966/1‑68 (MQ=255) cctggCCAAATAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGTTCAGGGATTAGTTACGCa > 1:33855501/1‑68 (MQ=255) cctggCCAAATAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGTTCAGGGATTAGTTACGCa > 1:22101738/1‑68 (MQ=255) ctaatccctgaacAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGTTCAGGGATTAGTTACGCAg < 1:18681284‑M1/55‑1 (MQ=255) tggCCAAATAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGTTCAGGGATTAGTTACGCAGa < 1:9297576/68‑1 (MQ=255) tggCCAAATAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGTTCAGGGATTAGTTACGCAGa < 1:25009442/68‑1 (MQ=255) ccAAATAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGTTCAGGGATTAGTTACGCAGCcgc > 1:7087707/1‑68 (MQ=255) ccAAATAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGTTCAGGGATTAGTTACGCAGAcgc > 1:36334872/1‑68 (MQ=255) aTAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGTTCAGGGATTAGTTACGCAGACGCgggg < 1:2938994/68‑1 (MQ=255) aTAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGTTCAGGGATTAGTTACGCAGACGCgggg < 1:27648941/68‑1 (MQ=255) tAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGTTCAGGGATTAGTTACGCAGACGCGGGGc < 1:17451206/68‑1 (MQ=255) tAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGTTCAGGGATTAGTTACGCAGACGCGGGGc < 1:21916060/68‑1 (MQ=255) acAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGTTCAGGGATTAGTTACGCAGACGCgggg < 1:27017467‑M1/63‑1 (MQ=255) AAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTgg < 1:14185616‑M1/68‑1 (MQ=255) | GGGTTAAATGTGGTGATGGATCGCTGCCCGGCTATTGAGATCCCTCGCCTGGGCCTGGCCAAATAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGG > CP009273/1023750‑1023884 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |