| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 1066816 = | 363 (0.820) | 25 (0.060) | 13/98 | NT | 6.5% | coding (406/801 nt) | rutD | putative aminoacrylate hydrolase, reactive intermediate detoxification |
| ? | CP009273 | 1066859 = | 400 (1.030) | coding (363/801 nt) | rutD | putative aminoacrylate hydrolase, reactive intermediate detoxification | |||||
Only 100 of 131 total aligned reads displayed.
TAACGGCTGGCTACGAATAAACGCCCATACGCGCCGCTGTTTTCAGGTTCGCGAACGATTACTGTATAGCGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/1066889‑1066816‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcggcgCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGCACAGTTACCGACGCGGGATAATCC > CP009273/1066859‑1066925 TAACGGCTGGCTACGAATAAACGCCCATACGCGCCGCTGTTTTCAGGTTCGCGAACGATTACTGTATA < 1:21385251/68‑1 CGGCTGGCTACGAATAAACGCCCATACGCGCCGCTGTTTTCAGGTTCGCGCACGATTACTGTTTAGCG > 1:36198812/1‑68 CGGCTGGCTACGAATAAACGCCCATACGCGCCGCTGTTTTCAGGTTCGCGAACGCTTACTGTATAGCG > 1:32623157/1‑68 CGGCTGGCTACGAATAAACGCCCATACGCGCCGCTGTTTTCAGGTTCGCGAACGATTTCTGTATAGCG > 1:29308169/1‑68 CGGCTGGCTACGAATAAACGCCCATACGCGCCGCTGTTTTCAGGTTCGCGAACGATTAGTGTATAGCG > 1:11662199/1‑68 CGGCTGGCTACGAATAAACGCCCATACGCGCCGCTGTTTTCAGGTTCGCGAACGATTACTGTATAGCG > 1:27983756/1‑68 CGGCTGGCTACGAATAAACGCCCATACGCGCCGCTGTTTTCAGGTTCGCGAACGATTACTGTATAGCG > 1:19018651/1‑68 CGGCTGGCTACGAATAAACGCCCATACGCGCCGCTGTTTTCAGGTTCGCGAACGATTACTGTATAGCG > 1:21143483/1‑68 CGGCTGGCTACGAATAAACGCCCATACGCGCCGCTGTTTTCAGGTTCGCGAACGATTACTGTATAGCG > 1:22930394/1‑68 CGGCTGGCTACGAATAAACGCCCATACGCGCCGCTGTTTTCAGGTTCGCGAACGATTACTGTATAGCG > 1:434362/1‑68 CGGCTGGCTACGAATAAACGCCCATACGCGCCGCTGTTTTCAGGTTCGCGAACGATTACTGTATAGCG > 1:3678280/1‑68 CGGCTGGCTACGAATAAACGCCCATACGCGCCGCTGTTTTCAGGTTCGCGAACGATTACTGTATAGCG > 1:36738183/1‑68 CGGCTGGCTACGAATAAACGCCCATACGCGCCGCTGTTTTCAGGTTCGCGAACGATTACTGTATAGCG > 1:36312707/1‑68 CGGCTGGCTACGAATAAACGCCCATACGCGCCGCTGTTTTCAGGTTCGCGAACGATTACTGTATAGCG > 1:27909951/1‑68 CGGCTGGCTACGAATAAACGCCCATACGCGCCGCTGTTTTCAGGTTCGCGAACGATTACTGTATAGCG > 1:10012640/1‑68 CGGCTGGCTACGAATAAACGCCCATACGCGCCGCTGTTTTCAGGTTCGCGAACGATTACTGTATAGCG > 1:36242320/1‑68 CGGCTGGCTACGAATAAACGCCCATACGCGCCGCTGTTTTCAGGTTCGCGAACGATTACTGTATAGCG > 1:29439600/1‑68 CGGCTGGCTACGAATAAACGCCCATACGCGCCGCTGTTTTCAGGTTCGCGAACGATTACTGTATAGCG > 1:31218160/1‑68 CGGCTGGCTACGAATAAACGCCCATACGCGCCGCTGTTTTCAGGTTCGCGAACGATTACTGTATAGCG > 1:34275812/1‑68 CGGCTGGCTACGAATAAACGCCCATACGCGCCGCTGTTTTCAGGTTCGCGAACGATTACTGTATAGCG > 1:34941145/1‑68 CGGCTGGCTACGAATAAACGCCCATACGCGCCGCTGTTTTCAGGTTCGCGAACGATTACTGTATAGCG > 1:999329/1‑68 CGGCTGGCTACGAATAAACGCCCATACGCGCCGCTGTTTTCAGGTTCGCGAACGATTACTGTATAGCG > 1:12922631/1‑68 CGGCTGGCTACGAATAAACGCCCATACGCGCCGCTGTTTTCAGGTACGCGGACGATTACTGTATAGCG > 1:9677080/1‑68 GGCTGGCTACGAATAAACGCCCATACGCGCCGCTGTTTTCAGGTTCGCGAACGATTACTGTATAGCG > 1:33709106/1‑67 GCTGGCTACGATTAAACGCCCATACGCGCCGCTGTTTTCAGGTTCGCGAACGATTACTGTATAGCGGC > 1:20470119/1‑68 GCTGGCTACGAATAAACGCCCATACGCGCCGCTGTTTTCAGGTTCGCGAACGATTACTGTATAGCGGC > 1:22291896/1‑68 GCTGGCTACGAATAAACGCCCATACGCGCCGCTGTTTTCAGGTTCGCGAACGATTACTGTATAGCGGC > 1:15881236/1‑68 GCTGGCTACGAATAAACGCCCATACGCGCCGCTGTTTTCAGGTTCGCGAACGATTACTGTATAGCGGC > 1:13151699/1‑68 GCTGGCTACGAATAAACGCCCATACGCGCCGCTGTTTTCAGGTTCGCGAACGATTACTGTATAGCGGC > 1:3121501/1‑68 GCTGGCTACGAATAAACGCCCATACGCGCCGCTGTTTTCAGGTTCGCGAACGATTACTGTATAGCGGC > 1:23515617/1‑68 GCTGGCTACGAATAAACGCCCATACGCGCCGCTGTTTTCAGGTTCGCGAACGATTACTGTATAGCGGC > 1:4918735/1‑68 GCTGGCTACGAATAAACGCCCATACGCGCCGCTGTTTTCAGGTTCGCGAACGATTACTGTATAGCGGC > 1:17078955/1‑68 GCTGGCTACGAATAAACGCCCATACGCGCCGCTGTTTTCAGGTTCGCGAACGATTACTGTATAGCGGC > 1:17117147/1‑68 GCTGGCTACGAATAAACGCCCATACGCGCCGCTGTTTTCAGGTTCGCGAACGATTACTGTATAGCGGC > 1:9674046/1‑68 CTGGCTACGAATAAACGCCCATACGCGCCGCTGTTTTCAGGTTCGCGAACGATTACTGTATAGCGGC < 1:1684047/67‑1 CTGGCTACGAATAAACGCCCATACGCGCCGCTGTTTTCAGGTTCGCGAACGATTACTGTATAGCGGC < 1:19933939/67‑1 TGGCTACGAATAAACGCCCATACGCGCCGCTGTTTTCAGGTTCGCGAACGATTACTGTATAGCGGCGC < 1:30021899/68‑1 TGGCTACGAATAAACGCCCATACGCGCCGCTGTTTTCAGGTTCGCGAACGATTACTGTATAGCGGCGC < 1:15406441/68‑1 TGGCTACGAATAAACGCCCATACGCGCCGCTGTTTTCAGGTTCGCGAACGATTACTGTATAGCGGCGC < 1:7012781/68‑1 TGGCTACGAATAAACGCCCATACGCGCCGCTGTTTTCAGGTTCGCGAACGATTACTGTATAGCGGCGC < 1:31999335/68‑1 TGGCTACGAATAAACGCCCATACGCGCCGCTGTTTTCAGGTTCGCGAACGATTACTGTATAGCGGCGC < 1:26150562/68‑1 TGGCTACGAATAAACGCCCATACGCGCCGCTGTTTTCAGGTTCGCGAACGATTACTGTATAGCGGCGC < 1:19906754/68‑1 TGGCTACGAATAAACGCCCATACGCGCCGCTGTTTTCAGGTTCGCGAACGATTACTGTATAGCGGCGC < 1:4840888/68‑1 TGGCTACGAATAAACGCCCATACGCGCCGCTGTTTTCAGGTTCGCGAACGATTACTGTATAGCGGCGC < 1:10618400/68‑1 CTACGAATAAACGCCCATACGCGCCGCTGTTTTCAGGTTCGCGAACGATTACTGTATAGCGGCGCGT < 1:24535026/67‑1 ATACACGCCCATACGCGCCGCTGTTTTCAGGTTCGCGAACGATTACTGTATAGCGGCGCGTATGGGCG < 1:21705363/68‑1 ATAAACGCCCATACGCGCCGCTGTTTTCAGGTTCGCGAACGATTACTGTATAGCGGCGCGTATGGGC < 1:6809075/67‑1 TAAACGCCCATACGCGCCGCTGTTTTCAGGTTCGCGAACGATTACTGTATAGCGGCGCGTATGGGCGT < 1:889816/68‑1 AAACGCCCATACGCGCCGCTGTTTTCAGGTTCGCGAACGATTACTGTATAGCGGCGCGTATGGGCGTT < 1:35702467/68‑1 GCCCATACGCGCCGCTGTTTTCAGGTTCGCGAACGATTACTGTATAGCGGCGCGTATGGGCGTTTATT < 1:22240462/68‑1 GCCCATACGCGCCGCTGTTTTCAGGTTCGCGAACGATTACTGTATAGCGGCGCGTATGGGCGTTTATT < 1:2081824/68‑1 GCCGCTGTTTTCAGGTCCGCCAACGATTACTGTATAGCGCCGCGTATGGGCGTTTATTCGTAGCCAGC < 1:2399002/68‑1 CGCTGTTTGCAGGGGCGCCAACGATAACTGTATAGCGGCGCGTTTGGGCGTTTATTCGTAGCCAGCCG < 1:33723008/68‑1 CGCTGTTTCCCGTTGCGCGAACGATTACTGTATAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCG < 1:14602815/68‑1 ttcCAGGTGCGCGAACGATTACTGTATAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAAC < 1:16122616/64‑1 TTTCCGGTTCGCGACCTATTACTGTATCGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAAC < 1:9461602/67‑1 TTTCAGGTTCGCGAACGATTACTGTATAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAAC < 1:16346771/67‑1 TTTCAGGCGCGCGAACGATAACTGAATAGCGCCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAAC < 1:32754058/67‑1 cGGTTCGCGACCGAAGACTGTCAAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGA < 1:7273448/67‑1 CGCGAACCATAACTGTATCGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGC < 1:30477284/68‑1 GAACGATTACTGTATAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGCAC < 1:9187868/67‑1 cCGATTACTGAATCCCGGCGCGTAGGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGCACAGT < 1:23563391/67‑1 ACGATAACTCTATAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGCACAGT < 1:5249658/68‑1 GCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGCACCGTTCCCGCCGCGGGAT > 1:34596227/1‑68 GCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGCACAGTTACCGACGCGGGAT > 1:36193489/1‑68 GCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGCACAGTTACCGACGCGGGAT > 1:32363160/1‑68 GCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGCACAGTTACCGACGCGGGAT > 1:37103817/1‑68 GCGGCGCGTATGGGCGGTTATTCGTAGCCAGCCGTTAACGCTGAGCAGCACAGTTACCGACGCGGGAT > 1:10426114/1‑68 GGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGCACAGTTACCGACGCGGGATAA > 1:9452174/1‑68 GGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGCACAGTTACCGACGCGGGATAA > 1:3961044/1‑68 GGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGCACAGTTACCGACGCGGG < 1:4146809/64‑1 GGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGCACAGTTACCGACGCGGG < 1:8153447/64‑1 GGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGCACAGTTACCGACGCGGG < 1:7813459/64‑1 GGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGCACAGTTACCGACGCGGG < 1:18405376/64‑1 GGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGCACAGTTACCGACGCGGG < 1:19297160/64‑1 GGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGCACAGTTACCGACGCGGG < 1:8651637/64‑1 GGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGCACAGTTACCGACGCGGG < 1:8664283/64‑1 GGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGCACAGTTACCGACGCGGG < 1:35688117/64‑1 GGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGCACAGTTACCGACGCGGG < 1:21583931/64‑1 GGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGCACAGTTACCGACGCGGG < 1:17619356/64‑1 GGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGCACAGTTACCGACGCGGG < 1:23385264/64‑1 GGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGCACAGTTACCGACGCGGG < 1:14734360/64‑1 GGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGCACAGTTACCGACGCGGG < 1:26334159/64‑1 GGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGCACAGTTACCGACGCGGG < 1:263830/64‑1 GGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGCACAGTTACCGACGCGGG < 1:11359792/64‑1 GGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGCACAGTTACCGACGCGGG < 1:30008669/64‑1 GGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGCACAGTTACCGACGCGGG < 1:30124164/64‑1 GGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGCACAGTTACCGACGCGGG < 1:11339179/64‑1 GGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGCACAGTTACCGACGCGGG < 1:30700182/64‑1 CGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGCACAGTTACCGACGCGGGATAAT < 1:5590523/67‑1 CGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGCACAGTTACCGACGCGGGATAAT < 1:12927348/67‑1 CGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGCACAGTTACCGACGCGGGATAAT < 1:19872246/67‑1 CGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGCACAGTTACCGACGCGGGATAAT < 1:5602806/67‑1 CGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGCACAGTTACCGACGCGGGATAAT < 1:23847708/67‑1 CGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGCACAGTTACCGACGCGGGATAAT < 1:2560405/67‑1 CGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGCACAGTTACCGACGCGGGATAAT < 1:29327333/67‑1 CGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGCACAGTTACCGACGCGGGATAAT < 1:36078221/67‑1 GCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGCACAGTTACCGACGCGGGATAATCC > 1:21852760/1‑68 GCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGCACAGTTACCGACGCGGGATAATCC > 1:27711676/1‑68 GCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGCACAGTTACCGACGCGGGATAATC < 1:10993633/67‑1 TAACGGCTGGCTACGAATAAACGCCCATACGCGCCGCTGTTTTCAGGTTCGCGAACGATTACTGTATAGCGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/1066889‑1066816‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcggcgCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGCACAGTTACCGACGCGGGATAATCC > CP009273/1066859‑1066925 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |