| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 1066816 = | 363 (0.820) | 25 (0.060) | 13/98 | NT | 6.5% | coding (406/801 nt) | rutD | putative aminoacrylate hydrolase, reactive intermediate detoxification |
| ? | CP009273 | 1066859 = | 400 (1.030) | coding (363/801 nt) | rutD | putative aminoacrylate hydrolase, reactive intermediate detoxification | |||||
Only 100 of 564 total aligned reads displayed.
GCGCGGGCCGCCATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCA > CP009273/1066749‑1066882 | gcgcGGGCCGCCATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGcgcc < 1:7333503/68‑1 (MQ=255) cgcgGGCCGCCATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGcgcc > 1:35257662/1‑67 (MQ=255) attatcccgcgtcggtaactgtgctgatcagcgttaacggctggctacgaataaacgcccatacgcg < 1:36078221‑M1/2‑1 (MQ=255) attatcccgcgtcggtaactgtgctgatcagcgttaacggctggctacgaataaacgcccatacgcg < 1:29327333‑M1/2‑1 (MQ=255) attatcccgcgtcggtaactgtgctgatcagcgttaacggctggctacgaataaacgcccatacgcg < 1:23847708‑M1/2‑1 (MQ=255) ttatcccgcgtcggtaactgtgctgatgagcgttaacggctggctacgaataaacgcccatacgcgcc > 1:23610476‑M1/65‑68 (MQ=255) cgGGCCGCCATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGcgccgcc > 1:17525271/1‑68 (MQ=255) cgGGCCGCCATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGcgccgcc < 1:12384878/68‑1 (MQ=255) gggCCGCGATGCAGTCGGCGGGATAGAGGATCTACGGGTGCGCTTCCACCCATGCCTGCGcgccgcg < 1:25577894/67‑2 (MQ=255) gggCCGCCATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGcgccgcc < 1:18119633/67‑1 (MQ=255) gggCCGCCATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGcgccgcc < 1:7611406/67‑1 (MQ=255) gggCCGCCATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGcgccgcc < 1:22131983/67‑1 (MQ=255) gggCCGCCATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGcgccgcc < 1:24552995/67‑1 (MQ=255) gggCCGCCATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGcgccgcc < 1:24917150/67‑1 (MQ=255) gggCCGCCATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGcgccgcc < 1:6977549/67‑1 (MQ=255) gggCCGCCATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGcgccgcc < 1:27696326/67‑1 (MQ=255) gggCCGCCATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGcgccgcc < 1:28191095/67‑1 (MQ=255) gggCCGCCATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGcgccgcc < 1:12909146/67‑1 (MQ=255) gggCCGCCATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGcgccgcc < 1:5650586/67‑1 (MQ=255) gggCCGCCATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGcgccgcc < 1:33655342/67‑1 (MQ=255) gggCCGCCATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGcgccgcc < 1:1104880/67‑1 (MQ=255) atcccgcgtcggtaactgtgctgctcagcgttaacggctggctacgaataaccgcccatacgcgccgc > 1:10426114‑M1/63‑68 (MQ=255) gccgccATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGcgccgccgc < 1:15928559/67‑1 (MQ=255) gccgccATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGcgccgccgc < 1:4722649/67‑1 (MQ=255) gccgccATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGcgccgccgc < 1:22225445/67‑1 (MQ=255) gccgccATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGcgccgccgc < 1:28433309/67‑1 (MQ=255) gccgccATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGcgccgccgc < 1:20518897/67‑1 (MQ=255) gccgccATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGcgccgccgc < 1:28986395/67‑1 (MQ=255) ccgccATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCt < 1:8835124/67‑1 (MQ=255) ccgccATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCt < 1:23379373/67‑1 (MQ=255) ccgccATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCt < 1:303657/67‑1 (MQ=255) cccgcgtcggtaactgtgctgatcagcgttaacggctggctacgaataaacgcccatacgcgcc < 1:29553975‑M1/4‑1 (MQ=255) cccgcgtcggtaactgtgctgatcagcgttaacggctggctacgaataaacgcccatacgcgcc < 1:36674398‑M1/4‑1 (MQ=255) cgccATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCtat < 1:33255099/68‑1 (MQ=255) cgccATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCtat < 1:6495896/68‑1 (MQ=255) cgccATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCCCGCCGCCGCtat < 1:34736744/68‑1 (MQ=255) gccATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCtata < 1:29893481/68‑1 (MQ=255) gccATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCtata < 1:23117536/68‑1 (MQ=255) gccATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCtata < 1:9506947/68‑1 (MQ=255) cATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATAc < 1:36335997/67‑1 (MQ=255) cATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATAc < 1:176693/67‑1 (MQ=255) cATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACa < 1:14072338/68‑1 (MQ=255) cATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACa < 1:11566321/68‑1 (MQ=255) cATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACa < 1:21764188/68‑1 (MQ=255) cATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACa < 1:8572133/68‑1 (MQ=255) cATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACa < 1:20880819/68‑1 (MQ=255) tCCAGTCGGCGGGATTGTGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAGt < 1:36876913/68‑1 (MQ=255) tCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAGt < 1:13621818/68‑1 (MQ=255) ccAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTa > 1:6161952/1‑68 (MQ=255) cggcggGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGt > 1:19192756/1‑68 (MQ=255) cggcggGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGt > 1:16707622/1‑68 (MQ=255) cggGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTc > 1:37120992/1‑67 (MQ=255) tAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGaa < 1:2416385/67‑1 (MQ=255) agagGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAAcc < 1:26284870/68‑1 (MQ=255) agagGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAAcc < 1:15114089/68‑1 (MQ=255) agagGAACAACGGCCGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGaa > 1:16969089/1‑66 (MQ=255) ggAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGa > 1:2921207/1‑68 (MQ=255) aacaacGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGATCCTGaaa > 1:22673062/1‑68 (MQ=255) aacaacGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGaaa > 1:2703657/1‑68 (MQ=255) aacaacGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGaaa > 1:11428194/1‑68 (MQ=255) acaacGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGaaa > 1:3289888/1‑67 (MQ=255) acaacGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGaaa > 1:30936510/1‑67 (MQ=255) aacGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACa > 1:13130281/1‑68 (MQ=255) aacGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACa > 1:18803336/1‑68 (MQ=255) ggCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAgcg > 1:18296934/1‑68 (MQ=255) cggctggctacgaataaacgcccatacgCGCCGCTATACAGTAATCGTTCGCGCAACGGGAAACAgcg < 1:14602815‑M1/40‑1 (MQ=255) cTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAgcgg < 1:45698/67‑1 (MQ=255) tGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAgcggc < 1:25798927/67‑1 (MQ=255) gcgcTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGgcgc < 1:11841475/68‑1 (MQ=255) gcgcTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGgcgc < 1:25416242/68‑1 (MQ=255) gcgcTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGgcgc < 1:19715063/68‑1 (MQ=255) gcgcTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGgcgc < 1:4131745/68‑1 (MQ=255) gcTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGt > 1:30046386/1‑68 (MQ=255) gcTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGt > 1:26439277/1‑68 (MQ=255) gcTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGt > 1:34986561/1‑68 (MQ=255) gcTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGt < 1:10837921/68‑1 (MQ=255) gcTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGt < 1:1629282/68‑1 (MQ=255) gcTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGt < 1:21241220/68‑1 (MQ=255) ttCCACCCATGCCTGCGCTCAGCCGCTATTCAGTAATCGTTCGCGAACCTGAATCCAGCGGCGCGTAt > 1:5498816/1‑68 (MQ=255) ttCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTa < 1:9750856/67‑1 (MQ=255) ttCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTa < 1:31295666/67‑1 (MQ=255) cACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATgg > 1:595480/1‑67 (MQ=255) aataaacgcccatacgCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGc < 1:27356042‑M1/52‑1 (MQ=255) aCCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGc > 1:4233263/1‑68 (MQ=255) aCCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGc > 1:32373859/1‑68 (MQ=255) aCCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGc > 1:7174177/1‑68 (MQ=255) ccATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGt > 1:19407743/1‑68 (MQ=255) ccATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGt > 1:8072601/1‑68 (MQ=255) ccATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGt > 1:6796122/1‑68 (MQ=255) cgcccatacgCGCCGCTATACAGTAATCGTTCGCGCACCTGAAAACAGCGGCGCGTATGGGCGTTTAt < 1:3423556‑M1/58‑1 (MQ=255) ccTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGGAAACAGCGGCGCGTATGGGCGTTTAt > 1:10152275/1‑67 (MQ=255) cTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTAtt < 1:4977993/67‑1 (MQ=255) cTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTc > 1:15586597/1‑68 (MQ=255) cgcgcCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTa > 1:196125/1‑68 (MQ=255) gcgcCGCCGCTATACAGTAATCGTTCGCGATCCTGAAAACAGCGGCGCGTATGGGCGGTTATTCGTa > 1:32211675/1‑67 (MQ=255) gcgcCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTa > 1:20041290/1‑67 (MQ=255) gcgcCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTa > 1:35637155/1‑67 (MQ=255) gcgcCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTa > 1:35758761/1‑67 (MQ=255) gccgccgcTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTagcc < 1:9340649/68‑1 (MQ=255) gCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTagcca < 1:15406441‑M1/67‑1 (MQ=255) | GCGCGGGCCGCCATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCA > CP009273/1066749‑1066882 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |