| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 1066816 = | 363 (0.820) | 25 (0.060) | 13/98 | NT | 6.5% | coding (406/801 nt) | rutD | putative aminoacrylate hydrolase, reactive intermediate detoxification |
| ? | CP009273 | 1066859 = | 400 (1.030) | coding (363/801 nt) | rutD | putative aminoacrylate hydrolase, reactive intermediate detoxification | |||||
Only 100 of 624 total aligned reads displayed.
GCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGCACAGTTACCGACGCGGGATAATCC > CP009273/1066792‑1066925 | tggctacgaataaacgcccatacgcgccgctgttttcaggttcgcgaacgattactgtatagcggcgc < 1:7012781‑M2/1‑1 (MQ=255)tggctacgaataaacgcccatacgcgccgctgttttcaggttcgcgaacgattactgtatagcggcgc < 1:15406441‑M2/1‑1 (MQ=255)tggctacgaataaacgcccatacgcgccgctgttttcaggttcgcgaacgattactgtatagcggcgc < 1:22168214‑M2/1‑1 (MQ=255)gcgcTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGgcgc < 1:18157591/68‑1 (MQ=255)gcgcTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGgcgc < 1:29516110/68‑1 (MQ=255)gcgcTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGgcgc < 1:15929451/68‑1 (MQ=255)gcgcTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGgcgc < 1:15720121/68‑1 (MQ=255)gcgcTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGgcgc < 1:6470717/68‑1 (MQ=255)gcgcTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGgcgc < 1:36410662/68‑1 (MQ=255) gcTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGt < 1:23425866/68‑1 (MQ=255) gcTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGt > 1:34986561/1‑68 (MQ=255) gcTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGt > 1:30046386/1‑68 (MQ=255) gcTTCCACCCATCCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGt < 1:13005946/68‑1 (MQ=255) ttCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTa < 1:16875730/67‑1 (MQ=255) aataaacgcccatacgCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGc < 1:27356042‑M1/52‑1 (MQ=255) aCCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGc > 1:29938587/1‑68 (MQ=255) cccATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCg < 1:3621316/68‑1 (MQ=255) taaacgcccatacgcgccgctgttttcaggttcgcgaacgattactgtatagcggcgCGTATGGGCGt < 1:889816‑M2/11‑1 (MQ=255) ccATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGt > 1:8072601/1‑68 (MQ=255) tGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTa > 1:20893689/1‑68 (MQ=255) gCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTAt > 1:7355856/1‑68 (MQ=255) ccTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTAt > 1:34599934/1‑67 (MQ=255) cgcgcCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTa > 1:196125/1‑68 (MQ=255) gcgcCGCCGCTATACAGTAATCGTTCGCGATCCTGAAAACAGCGGCGCGTATGGGCGGTTATTCGTa > 1:32211675/1‑67 (MQ=255) gcgcCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTTTGGGCGTTTATTCgga > 1:6858909/1‑65 (MQ=255) gcgcCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTa > 1:35758761/1‑67 (MQ=255) gcgcCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTa > 1:35637155/1‑67 (MQ=255) gcgcCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTa > 1:61126/1‑67 (MQ=255) gccgccgcTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTagcc < 1:22549822/68‑1 (MQ=255) gCGCCGGTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTagcca < 1:36097185‑M1/67‑1 (MQ=255) gCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTagcca < 1:19906754‑M1/67‑1 (MQ=255) GCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTagccagc > 1:17117147‑M1/1‑68 (MQ=255) GCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTAATCGTagccagc > 1:20470119‑M1/1‑68 (MQ=255) cgctgtttcccgttgcgcgaacgattactgtatagcggcgCGTATGGGCGTTTATTCGTAGCCAGCCg < 1:14602815‑M2/28‑1 (MQ=255) CGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCg > 1:31987284‑M1/1‑68 (MQ=255) CGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCg > 1:3678280‑M1/1‑68 (MQ=255) CGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCg > 1:22930394‑M1/1‑68 (MQ=255) CGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCg > 1:34275812‑M1/1‑68 (MQ=255) GCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGt < 1:4676682‑M1/68‑1 (MQ=255) taCAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAAc < 1:25896498/68‑1 (MQ=255) tttcaggcgcgcgaacgataactgaatagcgccgCGTATGGGCGTTTATTCGTAGCCAGCCGTTAAc < 1:32754058‑M2/33‑1 (MQ=255) aCAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAAc > 1:20046144/1‑67 (MQ=255) aCAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAAc > 1:16585601/1‑67 (MQ=255) aCAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAAc > 1:14166522/1‑67 (MQ=255) aCAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAAc > 1:5392592/1‑67 (MQ=255) aCAGTAATCGTTCGCGAACCTGAAAACACCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAAc > 1:28718947/1‑67 (MQ=255) aGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAAc > 1:10234419/1‑65 (MQ=255) aGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAAc > 1:4923761/1‑65 (MQ=255) aGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAAc > 1:11419449/1‑65 (MQ=255) aaTCGTTCGCTAACCTGAAAAAAGCGTCGATTATGGGCGTTTATTCTTAGCCAGCCGTTAACGCTGa < 1:32465902/67‑1 (MQ=255) aaTCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCt < 1:19484464/65‑1 (MQ=255) aaTCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGa > 1:33717129/1‑67 (MQ=255) aaTCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGa > 1:31146467/1‑67 (MQ=255) aaTCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGa < 1:4112411/67‑1 (MQ=255) aaTCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGa < 1:8470956/67‑1 (MQ=255) aaTCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGa > 1:9745847/1‑67 (MQ=255) aaTCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGa < 1:28086876/67‑1 (MQ=255) aaTCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGa > 1:11522737/1‑67 (MQ=255) aaTCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGa > 1:11893135/1‑67 (MQ=255) aaTCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGa > 1:13437829/1‑67 (MQ=255) aaTCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGa < 1:19371612/67‑1 (MQ=255) aaTCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGa < 1:23764007/67‑1 (MQ=255) aaTCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGa < 1:25545357/67‑1 (MQ=255) ctCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATc < 1:26474558/67‑1 (MQ=255) aTCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATc < 1:28960826/68‑1 (MQ=255) aTCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATc < 1:13302634/68‑1 (MQ=255) aTCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATc < 1:21204843/68‑1 (MQ=255) aTCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATc < 1:2784768/68‑1 (MQ=255) tCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCa > 1:16281151/1‑68 (MQ=255) cGTTCGCGAACCTGAAGACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCa > 1:29284942/1‑67 (MQ=255) cGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCa > 1:26310656/1‑67 (MQ=255) cGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCa > 1:24459762/1‑67 (MQ=255) cGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCa > 1:9553121/1‑67 (MQ=255) cGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCa > 1:7757015/1‑67 (MQ=255) cGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCa > 1:12612428/1‑67 (MQ=255) cGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCa > 1:14970140/1‑67 (MQ=255) gTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGc < 1:10853757/68‑1 (MQ=255) ttCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTATCAAGCCGTTAACGCTGATCAGc > 1:34039440/1‑67 (MQ=255) ttCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGc > 1:5685932/1‑67 (MQ=255) tCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGcac < 1:12312378/68‑1 (MQ=255) cgcgAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGcaca < 1:25354732/68‑1 (MQ=255) cgcgAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGcaca < 1:1000928/68‑1 (MQ=255) cgcgAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGcaca < 1:9133551/68‑1 (MQ=255) cgcgAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGcaca < 1:22298290/68‑1 (MQ=255) cgcgAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGcaca < 1:20622723/68‑1 (MQ=255) gcgAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGCACAg < 1:24916196/68‑1 (MQ=255) gcgAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGCACAg < 1:18929916/68‑1 (MQ=255) gAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGCACAGtt < 1:30658646/68‑1 (MQ=255) gAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGCACAGt < 1:26989518/67‑1 (MQ=255) gAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGCACAGt < 1:10577836/67‑1 (MQ=255) gAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGCACAGTTACCGAc < 1:27618914/68‑1 (MQ=255) gAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGCACAGTTACCGAc < 1:30318823/68‑1 (MQ=255) gAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGCACAGTTACCGAc < 1:37121292/68‑1 (MQ=255) aCAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGCACAGTTACCGCCGCgg > 1:31380257/1‑68 (MQ=255) aCAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGCACAGTTACCGACGCgg > 1:4393980/1‑68 (MQ=255) ggcgCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGCACAGTTACCGACGCggg < 1:17711089‑M2/60‑1 (MQ=255) ggcgCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGCACAGTTACCGACGCggg < 1:14734360‑M2/60‑1 (MQ=255) ggcgCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGCACAGTTACCGACGCggg < 1:11167272‑M2/60‑1 (MQ=255) gCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGCACAGTTACCGACGCGGGATAATcc > 1:21412457‑M2/2‑68 (MQ=255) gCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGCACAGTTACCGACGCGGGATAATcc > 1:21852760‑M2/2‑68 (MQ=255) | GCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGCACAGTTACCGACGCGGGATAATCC > CP009273/1066792‑1066925 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |