| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 1242300 = | 945 (2.120) | 366 (0.870) | 54/106 | NT | 28.9% | coding (533/1698 nt) | treA | periplasmic trehalase |
| ? | CP009273 | = 1292972 | 906 (2.150) | coding (606/2676 nt) | adhE | fused acetaldehyde‑CoA dehydrogenase/iron‑dependent alcohol dehydrogenase/pyruvate‑formate lyase deactivase | |||||
Only 100 of 522 total aligned reads displayed.
GGTATATTACTGGGACAGTTACTTCACCATGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/1242368‑1242300‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcATACAGCTCCGGTAAACCAGCTATCGGTGTAGGCGCGGGCAACACTCCAGTTGTTATCGATGAA < CP009273/1292972‑1292909 GGTATATTACTGGGACAGTTACTTCACCATGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTC > 1:24668206/1‑67GGTATATTACTGGGACAGTTACTTCACCATGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTC < 1:21967612/67‑1GGTATATTACTGGGACAGTTACTTCACCATGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTC > 1:36343155/1‑67 TATATTACTGGGACAGTTACTTCACCATGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGC < 1:884601/67‑1 TATATTACTGGGACAGTTACTTCACCATGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGC < 1:33309688/67‑1 TATATTACTGGGACAGTTACTTCACCATGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGC < 1:33974570/67‑1 TATATTACTGGGACAGTTACTTCACCATGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGC < 1:15201176/67‑1 TATATTACTGGGACAGTTACTTCACCATGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCG < 1:16050673/66‑1 ATATTACTGGGACAGTTACTTCACCATGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCA < 1:9050150/67‑1 TATTACTGGGACAGTTACTTCACCATGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCAT > 1:33748456/1‑67 TTACTGGGACAGTTACTTCACCATGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACA > 1:2838100/1‑68 TACTGGGACAGTTACTTCACCATGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACA > 1:19231446/1‑67 TACTGGGACAGTTACTTCACCATGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCACACAG < 1:13437883/68‑1 ACTGGGACAGTTACTTCACCATGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACA > 1:31495813/1‑66 ACTGGGACAGTTACTTCACCATGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACA > 1:25965700/1‑66 ACTGGGACAGTTACTTCACCATGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACA > 1:22313179/1‑66 ACTGGGACAGTTACTTCACCATGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACA > 1:27380950/1‑66 ACTGGGACAGTTACTTCACCATGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACA > 1:30074908/1‑66 ACTGGGACAGTTACTTCACCATGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACA > 1:19825861/1‑66 ACTGGGACAGTTACTTCACCATGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACA > 1:5479275/1‑66 ACTGGGACAGTTACTTCACCATGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACA > 1:18141340/1‑66 ACTGGGACAGTTACTTCACCATGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACA > 1:34424996/1‑66 ACTGGGACAGTTACTTCACCATGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACA > 1:35296661/1‑66 ACTGGGACAGTTACTTCACCATGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACA > 1:3484514/1‑66 ACTGGGACAGTTACTTCACCATGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACA > 1:37140614/1‑66 ACTGGGACAGTTACTTCACCATGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACA > 1:14204549/1‑66 TGGGACTGTTACTTCACCATGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCAAACAGCT > 1:20688638/1‑67 TGGGACAGTTACTTCACCATGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACAGCT > 1:5104387/1‑67 TGGGACAGTTACTTCACCATGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACAGCT > 1:13599792/1‑67 TGGGACAGTTACTTCACCATGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACAGCT > 1:13984779/1‑67 TGGGACAGTTACTTCACCATGTTAGGACTTGCAGAAAGCGGTCACTGGGATAAAGTCGAATACAGCT > 1:26814068/1‑67 GGACAGTTACTTCACCATGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACAGCTCCG > 1:768980/1‑68 GACAGTTACTTCACCATGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACAGCTCCGG > 1:14888574/1‑68 GACAGTTACTTCACCATGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACAGCTCCGG > 1:29313364/1‑68 GACAGTTACTTCACCATGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACAGCTCCGG > 1:12214842/1‑68 GACAGTTACTTCACCATGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACAGCTCCGG > 1:17162020/1‑68 GACAGTTACTTCACCATGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACAGCTCCGG > 1:2565208/1‑68 GACAGTTACTTCACCATGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACAGCTCCG < 1:23756373/67‑1 ACAGTTACTTCCCCATGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATTCAGCTCCGGT > 1:13009360/1‑68 ACAGTTACTTCACCATGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACAGCTCCGGT > 1:14390241/1‑68 ACAGTTACTTCACCATGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACAGCTCCGGT > 1:2981051/1‑68 ACAGTTACTTCACCATGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACAGCTCCGGT > 1:30582450/1‑68 CAGTTACTTCACCATGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCACATACAGCTCCGGTA > 1:9514595/1‑68 AGTTACTTCACCATGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACAGCTCCGGTAA > 1:36794578/1‑68 TACTTCACCATGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACAGCTCCGGTAAACC > 1:6638541/1‑68 TACTTCACCATGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACAGCTCCGGTAAACC > 1:28073961/1‑68 TTCACCATGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACAGCTCCGGTAAACCA > 1:806690/1‑66 CACCATGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACAGCTCCGGTAAACCAGCTA > 1:12896221/1‑68 CACCATGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACAGCTCCGGTAAACCAGCTA > 1:28706303/1‑68 CACCATGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACAGCTCCGGTAAACCAGCTA > 1:27061115/1‑68 CATGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACAGCTCCGGTAAACCAGCTATCG < 1:4711602/68‑1 ATGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACAGCTCCGGTAAACCAGCTATCGG > 1:11949286/1‑68 TGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACAGCTCCGGTAAACCAGCTATCGGT < 1:12561221/68‑1 TGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACAGCTCCGGTAAACCAGCTATCGGT < 1:32921863/68‑1 TGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACAGCTCCGGTAAACCAGCTATCGGT < 1:34230230/68‑1 TGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACAGCTCCGGTAAACCAGCTATCGGT < 1:30771380/68‑1 TGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACAGCTCCGGTAAACCAGCTATCGGT < 1:28915264/68‑1 TGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACAGCTCCGGTAAACCAGCTATCGGT < 1:22589433/68‑1 TGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACAGCTCCGGTAAACCAGCTATCGGT < 1:25414239/68‑1 AGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACAGCTACGGTAAACCAGCTATCGGTGTAG > 1:10550621/1‑68 GACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACAGCTCCGGTAAACCAGCTATCGGTGTAGGC > 1:7174027/1‑68 GACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACAGCTCCGGTAAACCAGCTATCGGTGTAGGC > 1:29608624/1‑68 GACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACAGCTCCGGTAAACCAGCTATCGGTGTAGGC > 1:9212228/1‑68 ACTTGCCGAAAGCGGTCACTGGGATAAAGTCTCATACAGCTCCGGTAAACCAGCTATCCGAGTAGGC > 1:24748576/1‑67 ACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACAGCTCCGGTAAACCAGCTATCGGTGTAGGC > 1:10053910/1‑67 ACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACAGCTCCGGTAAACCAGCTATCGGTGTAGGC > 1:3551403/1‑67 ACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACAGCTCCGGTAAACCAGCTATCGGTGTAGGC > 1:13869974/1‑67 ACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACAGCTCCGGTAAACCAGCTATCGGTGTAGGC > 1:15549241/1‑67 ACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACAGCTCCGGTAAACCAGCTATCGGTGTAGGC > 1:33561859/1‑67 ACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACAGCTCCGGTAAACCAGCTATCGGTGTAGGC > 1:24946637/1‑67 ACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACAGCTCCGGTAAACCAGCTATCGGTGTAGGC > 1:23067484/1‑67 ACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACAGCTCCGGTAAACCAGCTATCGGTGTAGGC > 1:22903418/1‑67 ACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACAGCTCCGGTAAACCAGCTATCGGTGTAGGC > 1:263962/1‑67 ACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACAGCTCCGGTAAACCAGCTATCGGTGTAGGC > 1:20244346/1‑67 CTTGCCGAAAGCGGTCACTGGGATAAAGTCGCATACAGCTCCGGTAAACCAGCTATCGGTGTAGGCGC > 1:28257927/1‑68 CGAAAGCGGTCACTGGGATAATGTCGCATACAGCTCCGGTAAACCAGCTATCGGTGTAGGCGCGGGC < 1:21642198/67‑1 CGAAAGCGGTCACTGGGATAAAGTCGCATACAGCTCCGGTAAACCAGCTATCGGTGTAGGCGCGGGCA > 1:32264011/1‑68 CGAAAGCGGTCACTGGGATAAAGTCGCATACAGCTCCGGTAAACCAGCTATCGGTGTAGGCGCGGGCA > 1:35102070/1‑68 AAGCGGTCACTGGGATAAAGTCGCATACAGCTCCGGTAAACCAGCTATCGGTGTAGGCGCGGGCAAC < 1:31080139/67‑1 AGCGGTCACTGGGATAAAGTCGCATACAGCTCCGGTAAACCAGCTATCGGTGTAGGCGCGGGCAAC > 1:17388598/1‑66 AGCGGTCACTGGGATAAAGTCGCATACAGCTCCGGTAAACCAGCTATCGGTGTAGGCGCGGGCAAC > 1:16352127/1‑66 GCGGTCACTGGGATAAAGTCGCATACAGCTCCGGTAAACCAGCTATCGGTGTAGGCGCGGGCAACAC > 1:6077890/1‑67 GGTCACTGGGATAAAGTCGCATACAGCTCCGGTAAACCAGCTATCGGTGTAGGCGCGGGCAACACT < 1:24170485/66‑1 GGTCACTGGGATAAAGTCGCATACAGCTCCGGTAAACCAGCTATCGGTGTAGGCGCGGGCAACACT < 1:6285720/66‑1 GGTCACTGGGATAAAGTCGCATACAGCTCCGGTAAACCAGCTATCGGTGTAGGCGCGGGCAACACT < 1:11628974/66‑1 GGTCACTGGGATAAAGTCGCATACAGCTCCGGTAAACCAGCTATCGGTGTAGGCGCGGGCAACACT < 1:4117738/66‑1 GGTCACTGGGATAAAGTCGCATACAGCTCCGGTAAACCAGCTATCGGTGTAGGCGCGGGCAACACT < 1:34612651/66‑1 GGTCACTGGGATAAAGTCGCATACAGCTCCGGTAAACCAGCTATCGGTGTAGGCGCGGGCAACACT < 1:17762126/66‑1 CACTGGGATAAAGTCGCATACAGCTCCGGTAAACCAGCTATCGGTGTAGGCGCGGGCAACACTCCAGT < 1:35991812/68‑1 CACTGGGATAAAGTCGCATACAGCTCCGGTAAACCAGCTATCGGTGTAGGCGCGGGCAACACTCCAG < 1:21435376/67‑1 ATAAAGTCGCATACAGCTCCGGTAAACCAGCTATCGGTGTAGGCGCGGGCAACACTCCAGTTGTTATC > 1:6449469/1‑68 ATAAAGTCGCATACAGCTCCGGTAAACCAGCTATCGGTGTAGGCGCGGGCAACACTCCAGTTGTTATC > 1:19676944/1‑68 AGTCGCATACAGCTCCGGTAAACCAGCTATCGGTGTAGGCGCGGGCAACACTCCAGTTGTTATCGATG > 1:27581332/1‑68 AGTCGCATACAGCTCCGGTAAACCAGCTATCGGTGTAGGCGCGGGCAACACTCCAGTTGTTATCGATG > 1:20093087/1‑68 AGTCGCATACAGCTCCGGTAAACCAGCTATCGGTGTAGGCGCGGGCAACACTCCAGTTGTTATCGATG > 1:11282629/1‑68 AGTCGCATACAGCTCCGGTAAACCAGCTATCGGTGTAGGCGCGGGCAACACTCCAGTTGTTATCGATG > 1:18561176/1‑68 CGCATACAGCTCCGGTAAACCAGCTATCGGTGTAGGCGCGGGCAACACTCCAGTTGTTATCGATGAA < 1:20881034/67‑1 CGCATACAGCTCCGGTAAACCAGCTATCGGTGTAGGCGCGGGCAACACTCCAGTTGTTATCGATGAA < 1:27207271/67‑1 CGCATACAGCTCCGGTAAACCAGCTATCGGTGTAGGCGCGGGCAACACTCCAGTTGTTATCGATGAA < 1:11020690/67‑1 CGCATACAGCTCCGGTAAACCAGCTATCGGTGTAGGCGCGGGCAACACTCCAGTTGTTATCGATGAA < 1:18872469/67‑1 GGTATATTACTGGGACAGTTACTTCACCATGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/1242368‑1242300‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcATACAGCTCCGGTAAACCAGCTATCGGTGTAGGCGCGGGCAACACTCCAGTTGTTATCGATGAA < CP009273/1292972‑1292909 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |