BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	1433166 =	247 (0.560)	16 (0.040)	9/96	NT	6.5%	coding (1876/3525 nt)	pfo	pyruvate‑flavodoxin oxidoreductase
*	?	CP009273	1433229 =	249 (0.650)	16 (0.040)	9/96	NT	6.5%	coding (1813/3525 nt)	pfo	pyruvate‑flavodoxin oxidoreductase

Only 100 of 140 total aligned reads displayed.

ACTGGCAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGCGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP009273/1433240‑1433166

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcgccaGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCACCCT  >  CP009273/1433229‑1433294

ACTGGCAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCAC                                                                           >  1:7604711/1‑68

ACTGGCAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCAC                                                                           >  1:2322489/1‑68

ACTGGCAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCAC                                                                           >  1:25171506/1‑68

ACTGGCAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCAC                                                                           >  1:25644015/1‑68

ACTGGCAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCAC                                                                           >  1:25687111/1‑68

ACTGGCAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCAC                                                                           >  1:27248962/1‑68

  TGGCAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAG                                                                         <  1:3709008/68‑1

   GGCAGGCTCTGGCGCTGTCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGC                                                                        <  1:2376259/68‑1

   GGCAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGC                                                                        <  1:29765163/68‑1

   GGCAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGC                                                                        <  1:3010087/68‑1

   GGCAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGC                                                                        <  1:31940335/68‑1

   GGCAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGC                                                                        <  1:33717826/68‑1

   GGCAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGC                                                                        <  1:25122977/68‑1

   GGCAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGC                                                                        <  1:25055076/68‑1

   GGCAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGC                                                                        <  1:23229295/68‑1

   GGCAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGC                                                                        >  1:1041127/1‑68

   GGCAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGC                                                                        <  1:22745317/68‑1

   GGCAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGC                                                                        <  1:21730193/68‑1

   GGCAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGC                                                                        <  1:21028050/68‑1

   GGCAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGC                                                                        <  1:1417014/68‑1

   GGCAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGC                                                                        <  1:12962284/68‑1

   GGCAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGC                                                                        <  1:11950466/68‑1

   GGCAGGCTCTGGCGCGGGCGCGGGAATCCGTAGAAGAAGTTCCGGTGCAACCGGTAAATCCGCACAGC                                                                        <  1:6052194/68‑1

   GGCAGGCGCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGC                                                                        <  1:1711184/68‑1

    GCAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGC                                                                        >  1:4241518/1‑67

     CAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGCG                                                                       <  1:24883428/67‑1

     CAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGCG                                                                       <  1:7807347/67‑1

     CAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGCG                                                                       >  1:24981260/1‑67

     CAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGCG                                                                       <  1:1342744/67‑1

     CAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGCG                                                                       >  1:26911579/1‑67

     CAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGCG                                                                       <  1:27656128/67‑1

     CAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGCG                                                                       <  1:28517765/67‑1

     CAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGCG                                                                       >  1:30642301/1‑67

     CAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGCG                                                                       <  1:31866938/67‑1

     CAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGCG                                                                       >  1:1082263/1‑67

     CAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGCG                                                                       >  1:33498297/1‑67

     CAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGCG                                                                       <  1:10753162/67‑1

     CAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGCG                                                                       >  1:34084685/1‑67

     CAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGCG                                                                       >  1:34104807/1‑67

     CAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGCG                                                                       <  1:4963146/67‑1

     CAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGCG                                                                       <  1:16969856/67‑1

     CAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGCG                                                                       >  1:18815856/1‑67

     CAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGCG                                                                       >  1:20787555/1‑67

     CAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGCG                                                                       >  1:22986169/1‑67

     CAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGCG                                                                       <  1:16951121/67‑1

     CAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGCG                                                                       <  1:15610209/67‑1

     CAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGCG                                                                       <  1:18111401/67‑1

     CAGGCGCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGCG                                                                       <  1:25918411/67‑1

         CTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGCGCC                                                                     <  1:17442178/65‑1

         CTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGCGCC                                                                     <  1:35406033/65‑1

         CTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGCGCC                                                                     <  1:17589812/65‑1

          TCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGCGCCAGA                                                                  <  1:24222633/67‑1

            TGGCGCTGCCGCGTGAATCCGTAGAAGAAGTTCCGGTGCAAGCGGTAAATCCGCACAGCGCCAGAGC                                                                <  1:16015271/67‑1

               CGCTGGCGCGTGAATCCGTAGAAGACGTTCCGTTGCAACCGGTAAATCCGCACAGCGCCAGAGCCTG                                                             <  1:3205385/67‑1

               CGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGCGCCAGAGCCTG                                                             <  1:1933119/67‑1

               CGCTGGCGCGGGCATCCGTCGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGCGCCAGAGCCTG                                                             <  1:23135555/67‑1

                  gGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGCGCCAGAGCCTGCCAG                                                         <  1:14639082/67‑1

                   GGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGCGCCAGAGCCTGCCAGT                                                        <  1:12450517/68‑1

                   GGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGCGCCAGAGCCTGCCAGT                                                        <  1:36457550/68‑1

                    GCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGCGCCAGAGCCTGCCAGT                                                        <  1:26634695/67‑1

                    GCGCGTGAACCCGTAGAAGAAGTGCCGTTGCAACCGGTAAATCCGCCCAGCGCCAGAGCCTGCCAGT                                                        <  1:19459172/67‑1

                             TCCGTCGAAGAAGTTCCGTTGCAACCGGAAAATCCGCACACCGCCAGAGCCTGCCAGTTGCGTTCCAC                                              <  1:28914376/68‑1

                                  AGACGACGTTCCGTTGCAACCGGTAAATCCGCACAGCGCCAGAGCCTGCCAGTTGCGTTCCACCAGAT                                         <  1:19059676/68‑1

                                        AGTTCCGTTGCAACCGGTAAATCCGCACAGCGCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGG                                    <  1:14782068/67‑1

                                                                       GCCAGAGCCTGCCAGTTGCGTTCCCCCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCAC     >  1:5768358/1‑67

                                                                       GCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCACC    <  1:26629084/68‑1

                                                                       GCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCACC    <  1:6845833/68‑1

                                                                       GCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCACC    <  1:4793521/68‑1

                                                                       GCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCACC    <  1:36572604/68‑1

                                                                       GCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCACC    <  1:36532508/68‑1

                                                                       GCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCACC    <  1:29060286/68‑1

                                                                       GCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCACC    <  1:34431682/68‑1

                                                                       GCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCACC    <  1:21550330/68‑1

                                                                       GCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCACC    <  1:33473758/68‑1

                                                                       GCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCACC    <  1:29363943/68‑1

                                                                       GCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCACC    <  1:21068834/68‑1

                                                                       GCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCACC    <  1:28062964/68‑1

                                                                       GCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCACC    <  1:30874929/68‑1

                                                                       GCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCAC     <  1:13867247/67‑1

                                                                       GCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCAC     >  1:35797773/1‑67

                                                                       GCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCAGGCCTTTGCTACTGTAACTTTTGGCAATCGCAC     >  1:36329203/1‑67

                                                                         CAGAGCGTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCACCCT  <  1:31493862/68‑1

                                                                         CAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCtc     >  1:12625872/1‑63

                                                                         CAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCACCCT  <  1:21711338/68‑1

                                                                         CAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCACCCT  <  1:18865016/68‑1

                                                                         CAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCACCCT  <  1:10014877/68‑1

                                                                         CAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCACCCT  <  1:18177031/68‑1

                                                                         CAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCACCCT  <  1:6597007/68‑1

                                                                         CAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCACCCT  <  1:14526668/68‑1

                                                                         CAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCACCCT  <  1:30484756/68‑1

                                                                         CAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCACCCT  <  1:1775933/68‑1

                                                                         CAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCACCCT  <  1:15470053/68‑1

                                                                         CAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCACCCT  <  1:10556657/68‑1

                                                                         CAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCACCCT  <  1:37058907/68‑1

                                                                         CAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCACCCT  <  1:35064109/68‑1

                                                                         CAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCACCCT  <  1:36554658/68‑1

                                                                         CAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCACCCT  <  1:31473101/68‑1

                                                                         CAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCACCCT  <  1:35600525/68‑1

                                                                         CAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCAC     >  1:19829317/1‑65

                                                                         CAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCGTTGCTACTGTAACTTTTGGCAATCGCACCCT  <  1:5883530/68‑1

ACTGGCAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGCGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP009273/1433240‑1433166

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcgccaGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCACCCT  >  CP009273/1433229‑1433294

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.