| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 1433166 = | 247 (0.560) | 16 (0.040) | 9/96 | NT | 6.5% | coding (1876/3525 nt) | pfo | pyruvate‑flavodoxin oxidoreductase |
| ? | CP009273 | 1433229 = | 249 (0.650) | coding (1813/3525 nt) | pfo | pyruvate‑flavodoxin oxidoreductase | |||||
Only 100 of 349 total aligned reads displayed.
CGAGCATCGCAGCGGTTACGGTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGC > CP009273/1433100‑1433232 | cGAGCATCGCAGCGGTTACGGTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTg > 1:1226814/1‑68 (MQ=255)agggtgcgattgccaaaagttacagtagcaaaggccaggatctggtggaacgcaactggcaggctcTg < 1:30484756‑M1/2‑1 (MQ=255)agggtgcgattgccaaaagttacagtagcaaaggccaggatctggtggaacgcaactggcaggctcTg < 1:18865016‑M1/2‑1 (MQ=255)agggtgcgattgccaaaagttacagtagcaaaggccaggatctggtggaacgcaactggcaggctcTg < 1:10014877‑M1/2‑1 (MQ=255)agggtgcgattgccaaaagttacagtagcaaaggccaggatctggtggaacgcaactggcaggctcTg < 1:36554658‑M1/2‑1 (MQ=255)agggtgcgattgccaaaagttacagtagcaaaggccaggatctggtggaacgcaactggcaggctcTg < 1:23608473‑M1/2‑1 (MQ=255)agggtgcgattgccaaaagttacagtagcaaaggccaggatctggtggaacgcaactggcaggctcTg < 1:6597007‑M1/2‑1 (MQ=255)agggtgcgattgccaaaagttacagtagcaaaggccaggatctggtggaacgcaactggcaggctcTg < 1:34384456‑M1/2‑1 (MQ=255)agggtgcgattgccaaaagttacagtagcaaaggccaggatctggtggaacgcaactggcaggctcTg < 1:21711338‑M1/2‑1 (MQ=255)agggtgcgattgccaaaagttacagtagcaaaggccaggatctggtggaacgcaactggcaggctcTg < 1:35600525‑M1/2‑1 (MQ=255) ggtgcgattgccaaaagttacagtagcaaaggccaggatctggtggaacgcaactggcaggctcTGgc < 1:6930341‑M1/4‑1 (MQ=255) ggtgcgattgccaaaagttacagtagcaaaggccaggatctggtggaacgcaactggcaggctcTGgc < 1:4793521‑M1/4‑1 (MQ=255) ggtgcgattgccaaaagttacagtagcaaaggccaggatctggtggaacgcaactggcaggctcTGgc < 1:29363943‑M1/4‑1 (MQ=255) gtgcgattgccaaaagttacagtagcaaaggccaggatctggtggaacgcaactggcaggctcTg > 1:15018818‑M1/64‑65 (MQ=255) gtgcgattgccaaaagttacagtagcaaaggccaggatctggtggaacgcaactggcaggctcTGgc < 1:13867247‑M1/4‑1 (MQ=255) gtgcgattgccaaaagttacagtagcaaaggccaggatctggtggaacgcaactggcaggctcTGgc > 1:19427288‑M1/64‑67 (MQ=255) gCATCGCAGCGGTTACGGTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGgc < 1:28415094/67‑1 (MQ=255) gCATCGCAGCGGTTACGGTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGgc < 1:23287931/67‑1 (MQ=255) gCATCGCAGCGGTTACGGTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGgc < 1:29796227/67‑1 (MQ=255) gcgattgccaaaagttacagtagcaaaggccaggatctggtggaacgcaactggcaggctcTGgc < 1:26173444‑M1/4‑1 (MQ=255) aTCGCAGCGGTTACGGTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGgc > 1:27901296/1‑65 (MQ=255) tCGCAGCGGTTACGGTTTTCACGAAATCAAGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCtg < 1:29688761/68‑1 (MQ=255) cGCAGCGGTTACGGTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCtgt < 1:6217321/68‑1 (MQ=255) cGCAGCGGTTACGGTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCtgt < 1:5691568/68‑1 (MQ=255) cGCAGCGGTTACGGTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCtgt < 1:3922777/68‑1 (MQ=255) cGCAGCGGTTACGGTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCtgt < 1:6962598/68‑1 (MQ=255) cGCAGCGGTTACGGTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCtgt < 1:3984645/68‑1 (MQ=255) cGCAGCGGTTACGGTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCtgt < 1:13962710/68‑1 (MQ=255) cGCAGCGGTTACGGTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCtgt < 1:34959830/68‑1 (MQ=255) cGCAGCGGTTACGGTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCtgt < 1:18003281/68‑1 (MQ=255) cGCAGCGGTTACGGGTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCggt < 1:10609346/68‑1 (MQ=255) gCAGCGGTTACGGTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCtgt > 1:17504493/1‑67 (MQ=255) gCGGTTACGGTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCgg > 1:11215086/1‑68 (MQ=255) ggTTACGGTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGa < 1:32727873/67‑1 (MQ=255) ggTTACGGTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGa < 1:3682781/67‑1 (MQ=255) ggTTACGGTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGa < 1:27208066/67‑1 (MQ=255) ggTTACGGTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGAt > 1:19561956/1‑68 (MQ=255) ggTTACGGTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGAt > 1:29272660/1‑68 (MQ=255) ggTTAAGTTTTTAACGAAATCAGGGTCGGCATCGGAAACCACTGTCGGTCGATTGGAGCTGTGCGGa < 1:20304536/67‑1 (MQ=255) ttACGGTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGAtt < 1:166454/67‑1 (MQ=255) tACGGTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGAttt > 1:32410701/1‑67 (MQ=255) tACGGTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGAttt > 1:13408509/1‑67 (MQ=255) tACGGTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGAttt > 1:2535738/1‑67 (MQ=255) ggTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCg > 1:8671529/1‑68 (MQ=255) gTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCgg > 1:10337993/1‑68 (MQ=255) gTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCgg > 1:17286523/1‑68 (MQ=255) gTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCgg > 1:23037013/1‑68 (MQ=255) cACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCa < 1:7970735/68‑1 (MQ=255) cACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCa < 1:22054828/68‑1 (MQ=255) cGAAATCAGGGGCGGCATCGGAACCCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAAc < 1:30090652/68‑1 (MQ=255) cGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAAc > 1:14101889/1‑68 (MQ=255) cGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAAc > 1:33789218/1‑68 (MQ=255) aaaggccaggatctggtggaacgcaactggcaggctcTGGCGCTGGGCGGGTTTACCGGTTGCAACgg < 1:26868019‑M1/31‑1 (MQ=255) aaTCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGa < 1:31257528/68‑1 (MQ=255) aaTCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGa < 1:21433140/68‑1 (MQ=255) aTCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGaa < 1:8359157/68‑1 (MQ=255) tCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGa > 1:24423367/1‑66 (MQ=255) cAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAAct < 1:27282326/68‑1 (MQ=255) cAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAAct < 1:22607244/68‑1 (MQ=255) cAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAAct < 1:33053331/68‑1 (MQ=255) aGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAAct < 1:32494889/67‑1 (MQ=255) gggCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAActtct > 1:24916894/1‑68 (MQ=255) gggCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAActtct > 1:2478950/1‑68 (MQ=255) ggcggcATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAActtc < 1:24294740/66‑1 (MQ=255) ggcggcATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAActtc < 1:31527668/66‑1 (MQ=255) ggcggcATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAActt < 1:28044095/65‑1 (MQ=255) ggcggcATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAActt < 1:14726203/65‑1 (MQ=255) cgcggcATCGGAAACCACTGGCGGTCTATTGGAGCTGTGCGGATTTACCGGTTGCAACGGAActt < 1:35078652/64‑1 (MQ=255) gcggcATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAActtct > 1:36266381/1‑66 (MQ=255) gcggcATCGGAAACCACTGGCGGTCGATTGGCCCTGTGCGGATTTACCGCTTGCAACGGAAcatct > 1:34108400/1‑66 (MQ=255) cggcATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTtcttct > 1:26302533/1‑68 (MQ=255) atctggtggaacgcaactggcaggctcTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACGtcgtct < 1:19059676‑M1/41‑1 (MQ=255) ggcATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTtcttct < 1:33258173/67‑1 (MQ=255) gtggaacgcaactggcaggctcTGGCGGTGTGCGGATTTTCCGGTTGCAACGGAACTTCTTCGACGGa < 1:28914376‑M1/46‑1 (MQ=255) gcaactggcaggctcTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCAcgc < 1:50447‑M1/53‑1 (MQ=255) ccACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGGTTCAcgc > 1:12574027/1‑68 (MQ=255) ccACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCAcgc > 1:36424290/1‑68 (MQ=255) ccACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCAcgc > 1:25663239/1‑68 (MQ=255) ccACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCAcgc > 1:210225/1‑68 (MQ=255) cACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCAcgcg < 1:11854931/68‑1 (MQ=255) actggcaggctcTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACgcgcc < 1:12450517‑M1/56‑1 (MQ=255) ggCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACgcgcca > 1:18320669/1‑67 (MQ=255) cGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACgcgccagc < 1:7475660/67‑1 (MQ=255) cGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACgcgccagc > 1:5810800/1‑67 (MQ=255) cGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACgcgccagc > 1:26650545/1‑67 (MQ=255) cGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACgcgccagc < 1:30704629/67‑1 (MQ=255) cGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACgcgccagc < 1:30283774/67‑1 (MQ=255) cGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACgcgccagc < 1:26552988/67‑1 (MQ=255) cGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACgcgccagc > 1:23907346/1‑67 (MQ=255) cGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACgcgccagc > 1:17927929/1‑67 (MQ=255) cGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACgcgccagc < 1:15521930/67‑1 (MQ=255) ggTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACgcgccagcgc < 1:18693721/68‑1 (MQ=255) ggTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACgcgccagcg < 1:35916942/67‑1 (MQ=255) ggTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACgcgccagcg < 1:23996877/67‑1 (MQ=255) ggTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACgcgccagcg < 1:7685441/67‑1 (MQ=255) ggTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACgcgccagcg < 1:12911118/67‑1 (MQ=255) ggTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACgcgccagcg < 1:8812580/67‑1 (MQ=255) gctcTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACGcgccagcgccag < 1:14610307‑M1/64‑1 (MQ=255) gctcTGGCGCTGTGCGGATTTACCGCTTGCACCGGAACTTCTTCTACGGATTCACgcggcagcgcca < 1:16015271‑M1/63‑1 (MQ=255) ttGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCagag > 1:20573346/1‑67 (MQ=255) | CGAGCATCGCAGCGGTTACGGTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGC > CP009273/1433100‑1433232 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |