| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 1433166 = | 247 (0.560) | 16 (0.040) | 9/96 | NT | 6.5% | coding (1876/3525 nt) | pfo | pyruvate‑flavodoxin oxidoreductase |
| ? | CP009273 | 1433229 = | 249 (0.650) | coding (1813/3525 nt) | pfo | pyruvate‑flavodoxin oxidoreductase | |||||
Only 100 of 427 total aligned reads displayed.
GATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCACCCT > CP009273/1433163‑1433294 | gATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCaga < 1:10259261/68‑1 (MQ=255)gATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCaga < 1:28648293/68‑1 (MQ=255)gATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCaga < 1:12170894/68‑1 (MQ=255) ttGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCagag < 1:19227232/67‑1 (MQ=255) ttGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCagag > 1:20573346/1‑67 (MQ=255) ttGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCagag > 1:22807441/1‑67 (MQ=255) ttGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGc < 1:6933931/68‑1 (MQ=255) ttGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGACTCACGCGCCAGCGCCAGAGc < 1:2715625/68‑1 (MQ=255) ctggcgctggcgcgtgaatccgtagaagaagttccgttgcaaccggtaaatccgcacagcgccaGAGc < 1:14610307‑M2/4‑1 (MQ=255) GGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCagag < 1:11873833‑M1/65‑1 (MQ=255) cgctggcgcgggcatccgtcgaagaagttccgttgcaaccggtaaatccgcacagcgccaGAGCCTg < 1:23135555‑M2/7‑1 (MQ=255) CGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTg > 1:26911579‑M1/1‑67 (MQ=255) CGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTg > 1:34084685‑M1/1‑67 (MQ=255) CGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTg < 1:24883428‑M1/67‑1 (MQ=255) CGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTg < 1:30995932‑M1/67‑1 (MQ=255) CGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTg < 1:4963146‑M1/67‑1 (MQ=255) GCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCtgg < 1:25067843‑M1/67‑2 (MQ=255) GCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGcc < 1:31940335‑M1/68‑1 (MQ=255) GCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGcc < 1:23229295‑M1/68‑1 (MQ=255) GCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGcc < 1:28859662‑M1/68‑1 (MQ=255) GCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGcc < 1:21028050‑M1/68‑1 (MQ=255) GCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGcc < 1:10726713‑M1/68‑1 (MQ=255) GCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGcc < 1:16985246‑M1/68‑1 (MQ=255) gCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGtt < 1:3244265/67‑1 (MQ=255) ggATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCg < 1:15830581/68‑1 (MQ=255) tttACCGGTTGCAACGGAACTTCTTCTGCGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGtt > 1:23051926/1‑67 (MQ=255) tttACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGtt < 1:17676266/67‑1 (MQ=255) tttACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGtt > 1:5100249/1‑67 (MQ=255) tttACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGtt > 1:10913299/1‑67 (MQ=255) tttACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGtt < 1:11476814/67‑1 (MQ=255) tttACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGtt > 1:19660802/1‑67 (MQ=255) tttACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGtt > 1:34348534/1‑67 (MQ=255) tttACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGtt > 1:25568995/1‑67 (MQ=255) ttACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTcc < 1:12903857/68‑1 (MQ=255) ttACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTcc < 1:36338848/68‑1 (MQ=255) ttACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTcc < 1:21481790/68‑1 (MQ=255) ttACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTcc < 1:27654065/68‑1 (MQ=255) ttACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTcc < 1:18507484/68‑1 (MQ=255) ttACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTcc < 1:17861510/68‑1 (MQ=255) tACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTcca < 1:3550266/68‑1 (MQ=255) tACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTcca < 1:35076502/68‑1 (MQ=255) aCCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTccac < 1:28956228/68‑1 (MQ=255) aCCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTccac < 1:1758614/68‑1 (MQ=255) aCCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTccac < 1:28303473/68‑1 (MQ=255) aCCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTccac < 1:19512223/68‑1 (MQ=255) cGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTccacca > 1:16233898/1‑68 (MQ=255) cGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTccacca > 1:6464252/1‑68 (MQ=255) ttGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTCCACCAGa > 1:28073369/1‑67 (MQ=255) tGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGATCCTGCCAGTTGCGTTCCACCAGAt < 1:35896537/67‑1 (MQ=255) tGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTCCACCAGAt < 1:30002842/67‑1 (MQ=255) tGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTCCACCAGAt < 1:29269852/67‑1 (MQ=255) tGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTCCACCAGAt < 1:6164975/67‑1 (MQ=255) tGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTCCACCAGAt < 1:19356597/67‑1 (MQ=255) tGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTCCACCAGAt < 1:8261466/67‑1 (MQ=255) tGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTCCACCAGAt < 1:33745933/67‑1 (MQ=255) tGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTCCACCAGAt < 1:25979741/67‑1 (MQ=255) tGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTCCACCAGAt < 1:7785864/67‑1 (MQ=255) tGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTCCACCAGAt < 1:2251055/67‑1 (MQ=255) tGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTCCACCAGAt < 1:7418768/67‑1 (MQ=255) tGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTCCACCAGAt < 1:14826365/67‑1 (MQ=255) tGCAAAGCAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGCTCCACCAGAt < 1:2193786/67‑1 (MQ=255) gCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTCCACCAGAt > 1:1559293/1‑66 (MQ=255) aCGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCTgg < 1:8788351/68‑1 (MQ=255) cGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCTgg > 1:910398/1‑67 (MQ=255) cGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCTgg > 1:24231500/1‑67 (MQ=255) cGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGc < 1:3849155/68‑1 (MQ=255) aaCTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCtt > 1:13276651/1‑68 (MQ=255) aCTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCttt < 1:18135093/68‑1 (MQ=255) aCTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCttt > 1:33046888/1‑68 (MQ=255) ttcttcTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCttt > 1:12339626/1‑66 (MQ=255) tcttctACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCt < 1:31689448/68‑1 (MQ=255) ttctACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCt > 1:26652079/1‑66 (MQ=255) ttctACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCt > 1:35769157/1‑66 (MQ=255) ttctACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTAc < 1:24180377/68‑1 (MQ=255) aCGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTa > 1:6009079/1‑68 (MQ=255) aCGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTa > 1:13853543/1‑68 (MQ=255) aCGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTa > 1:4734830/1‑68 (MQ=255) cGGATTCACGCGCCAGCGCCAAAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTa > 1:6702020/1‑67 (MQ=255) ggATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTa > 1:27565209/1‑66 (MQ=255) ggATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAAc < 1:25141670/68‑1 (MQ=255) gATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACt > 1:3010932/1‑68 (MQ=255) aTTCACGCGCCAGCGCCAGAGCCTGCGACCTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACt < 1:34745321/67‑1 (MQ=255) ttCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACttt > 1:25813815/1‑68 (MQ=255) ttCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACttt > 1:26283400/1‑68 (MQ=255) gcgccagcgccaGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTggaa > 1:16763609/1‑66 (MQ=255) gcgccagcgccaGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCa < 1:2347463/68‑1 (MQ=255) gccaGAGCCTGCCAGTTGCGTTCCCCCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCAc > 1:5768358‑M2/5‑67 (MQ=255) gccaGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCAcc < 1:33473758‑M2/64‑1 (MQ=255) gccaGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCAcc < 1:4170360‑M2/64‑1 (MQ=255) caGAGCGTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCACCCt < 1:31493862‑M2/66‑1 (MQ=255) caGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCAc > 1:19829317‑M2/3‑65 (MQ=255) caGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCACCCt < 1:10556657‑M2/66‑1 (MQ=255) caGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCACCCt < 1:10014877‑M2/66‑1 (MQ=255) caGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCACCCt < 1:36554658‑M2/66‑1 (MQ=255) caGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCACCCt < 1:14526668‑M2/66‑1 (MQ=255) caGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCACCCt < 1:18865016‑M2/66‑1 (MQ=255) caGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCACCCt < 1:37058907‑M2/66‑1 (MQ=255) caGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCACCCt < 1:21711338‑M2/66‑1 (MQ=255) caGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCACCCt < 1:29723935‑M2/66‑1 (MQ=255) caGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCACCCt < 1:30484756‑M2/66‑1 (MQ=255) | GATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCACCCT > CP009273/1433163‑1433294 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |