| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 1894241 = | 299 (0.670) | 12 (0.030) | 5/90 | NT | 6.0% | coding (1558/1599 nt) | yoaD | putative membrane‑anchored cyclic‑di‑GMP phosphodiesterase, regulator of cellulose production |
| ? | CP009273 | 1894274 = | 135 (0.380) | coding (1591/1599 nt) | yoaD | putative membrane‑anchored cyclic‑di‑GMP phosphodiesterase, regulator of cellulose production | |||||
Only 100 of 244 total aligned reads displayed.
AAAGAGCAACCGGCGCACGATGAAGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCCATTATGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/1894318‑1894241‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccattatgccgTTACGTTAACGCTTACTCATCTTCATCGTGCGCCGGTTGCTCTTTAACAATGCGAACCAGATCAAC > CP009273/1894274‑1894339 AAAGAGCAACCGGCGCACGATGAAGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTC < 1:9000322/68‑1 AAGCGCACCCGGCGCAGGATGATGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTTATATGTCC < 1:34674202/68‑1 AAGAGCAACCGGCGCACGATGAAGATGTGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCC < 1:5846631/68‑1 AAGAGCAACCGGCGCACGATGAAGATGAGTAAGCGTTAACGTAACGGCGTAATGGGCGTGATATGTCC < 1:10014311/68‑1 AAGAGCAACCGGCGCACGATGAAGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCC < 1:26074315/68‑1 AAGAGCAACCGGCGCACGATGAAGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCC < 1:22380035/68‑1 AAGAGCAACCGGCGCACGATGAAGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCC < 1:21793078/68‑1 AAGAGCAACCGGCGCACGATGAAGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCC < 1:26601648/68‑1 AAGAGCAACCGGCGCACGATGAAGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCC < 1:30367971/68‑1 AAGAGCAACCGGCGCACGATGAAGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCC < 1:19493604/68‑1 AAGAGCAACCGGCGCACGATGAAGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCC < 1:24964367/68‑1 AAGAGCAACCGGCGCACGATGAAGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCC < 1:30602425/68‑1 AAGAGCAACCGGCGCACGATGAAGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCC < 1:1917633/68‑1 AAGAGCAACCGGCGCACGATGAAGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCC < 1:31047457/68‑1 AAGAGCAACCGGCGCACGATGAAGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCC < 1:31647614/68‑1 AAGAGCAACCGGCGCACGATGAAGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCC < 1:32049145/68‑1 AAGAGCAACCGGCGCACGATGAAGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCC < 1:34353788/68‑1 AAGAGCAACCGGCGCACGATGAAGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCC < 1:17257002/68‑1 AAGAGCAACCGGCGCACGATGAAGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCC < 1:24308494/68‑1 AAGAGCAACCGGCGCACGATGAAGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCC < 1:36368168/68‑1 AAGAGCAACCGGCGCACGATGAAGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCC < 1:15174083/68‑1 AAGAGCAACCGGCGCACGATGAAGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCC < 1:4283486/68‑1 AAGAGCAACCGGCGCACGATGAAGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCC < 1:4684352/68‑1 AAGAGCAACCGGCGCACGATGAAGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCC < 1:78707/68‑1 AAGACCAACGGGCGCACGATGAAGATGAGTAAGCGTTAACGTACCGTCATAATGGGCGTGATATGTCC < 1:28996279/68‑1 AGAGCAACCGGCGCACGATGAAGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCCA < 1:1623851/68‑1 AGAGCAACCGGCGCACGATGAAGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCCA > 1:9792237/1‑68 AGAGCAACCGGCGCACGATGAAGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCCA > 1:625692/1‑68 AGAGCAACCGGCGCACGATGAAGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCCA < 1:11059531/68‑1 AGAGCAACCGGCGCAAGTTGTAGATGAGTAATAGTTAACGTAACGGCATAATGGGCGTGATATGTCCA < 1:24550818/68‑1 AGCAACCGGCGCACGATGAAGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCCATT > 1:10268286/1‑68 AGCAACCGGCGCACGATGAAGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCCATT > 1:34516347/1‑68 AGCAACCGGCGCACGATGAAGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCCATT > 1:9203176/1‑68 AGCAACCGGCGCACGATGAAGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCCATT > 1:7516203/1‑68 AGCAACCGGCGCACGATGAAGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCCATT > 1:27718082/1‑68 AGCAACCGGCGCACGATGAAGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCCATT > 1:29441162/1‑68 AGCAACCGGCGCACGATGAAGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCCATT > 1:7201574/1‑68 AGCAACCGGCGCACGATGAAGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCCATT > 1:36821070/1‑68 AGCAACCGGCGCACGATGAAGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCCATT > 1:32815035/1‑68 AGCAACCGGCGCACGATGAAGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCCATT > 1:33373561/1‑68 AGCAACCGGCGCACGATGAAGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCCATT > 1:35347583/1‑68 AGCAACCGGCGCACGATGAAGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCCATT > 1:2039636/1‑68 AGCAACCGGCGCACGATGAAGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCCATT > 1:24160470/1‑68 AGCAACCGGCGCACGATGAAGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCCATT > 1:15729025/1‑68 AGCAACCGGCGCACGATGAAGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCCATT > 1:20139312/1‑68 AGCAACCGGCGCACGATGAAGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCCATT > 1:21397638/1‑68 AGCAACCGGCGCACGATGAAGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCCATT > 1:10423391/1‑68 GCAACCGGCGCACGATGAAGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCCAT < 1:18187472/66‑1 CAACCGGCGCACGATGAAGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCCATTAT < 1:23152751/68‑1 CAACCGGCGCACGATGAAGATGAGTAAGCGGTAACGTAACGGCATAATGGGCGTGATATGTCCATTAT < 1:36014328/68‑1 AACCGGCGCACGATGAAGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCCATTAT < 1:14903396/67‑1 AACCGGCGCACGATGAAGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCCATTAT < 1:36037980/67‑1 AACCGGCGCACGATGAAGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCCATTA < 1:3808365/66‑1 ACCGGCGCACGATGAAGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCCATTATGC < 1:27016913/68‑1 ACCGGCGCACGATGAAGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCCATTATGC < 1:6746791/68‑1 CGGCGCACGATGAAGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCCATTATGCCG > 1:12616944/1‑68 GCACGATGAAGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCCATTATGCCGTTAC < 1:16019781/68‑1 ACGATGAAGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCCATTATGCCGTTACG < 1:28043023/67‑1 GAAGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCCATTATGCCGTTACGTTAACG < 1:1889824/68‑1 GAAGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCCATTATGCCGTTACGTTAACG < 1:7338744/68‑1 GAACATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCCATTATGCCGTTACGTTAACG < 1:19828816/68‑1 acGCGTTAACGTACCGGCATAATGGGCGTGATATGTCCATTATGCCGTTACGTTAACGCTTACTCATC < 1:29061846/66‑1 AAGCGTAAACGAAACGGCATAAGGGGCGTGATAGGTCCATTATGCCGTTACGTTAACGCTTACTCATC < 1:5049909/68‑1 CCATTATGCCGTTACGTTAACGCTTACTCATCTTCATCGTGCGCCGGTTGCTCTTTAACAATGCGAA < 1:4513842/67‑1 CCATTATGCCGTTACGTTAACGCTTACTCATCTTCATCGTGCGCCGGTTGCTCTTTAACAATGCGAA < 1:1697663/67‑1 CCATTATGCCGTTACGTTAACGCTTACTCATCTTCATCGTGCGCCGGTTGCTCTTTAACAATGCGAA < 1:7700334/67‑1 CCATTATGCCGTTACGTTAACGCTTACTCATCTTCATCGTGCGCCGGTTGCTCTTTAACAATGCGAA < 1:13917636/67‑1 CCATTATGCCGTTACGTTAACGCTTACTCATCTTCATCGTGCGCCGGTTGCTCTTTAACAATGCGAA < 1:35059265/67‑1 CCATTATGCCGTTACGTTAACGCTTACTCATCTTCATCGTGCGCCGGTTGCTCTTTAACAATGCGAA > 1:25421213/1‑67 CCATTATGCCGTTACGTTAACGCTTACTCATCTTCATCGTGCGCCGGTTGCTCTTTAACAATGCGAA < 1:32142125/67‑1 CCATTATGCCGTTACGTTAACGCTTACTCATCTTCATCGTGCGCCGGTTGCTCTTTAACAATGCGAA < 1:30148728/67‑1 TATGCCGTTACGTTAACGCTTTCTCATCTTCATCGTGCGCCGGTTGCTCTTTAACAATGCGAACCAGA < 1:34194218/68‑1 TATGCCGTTACGTTAACGCTTACTCATCTTCATCGTGCGCCGGTTGCTCTTTAACAATGCGAACCAGA < 1:26022121/68‑1 TATGCCGTTACGTTAACGCTTACTCATCTTCATCGTGCGCCGGTTGCTCTTTAACAATGCGAACCAGA < 1:7028081/68‑1 TATGCCGTTACGTTAACGCTTACTCATCTTCATCGTGCGCCGGTTGCTCTTTAACAATGCGAACCAGA < 1:13359136/68‑1 TATGCCGTTACGTTAACGCTTACTCATCTTCATCGTGCGCCGGTTGCTCTTTAACAATGCGAACCAGA < 1:12383736/68‑1 TATGCCGTTACGTTAACGCTTACTCATCTTCATCGTGCGCCGGTTGCTCTTTAACAATGCGAACCAGA < 1:4354535/68‑1 TATGCCGTTACGTTAACGCTTACTCATCTTCATCGTGCGCCGGTTGCTCTTTAACAATGCGAACCAGA < 1:30263196/68‑1 TATGCCGTTACGTTAACGCTTACTCATCTTCATCGTGCGCCGGTTGCTCTTTAACAATGCGAACCAGA < 1:15402961/68‑1 TATGCCGTTACGTTAACGCTTACTCATCTTCATCGTGCGCCGGTTGCTCTTTAACAATGCGAACCAGA < 1:9714656/68‑1 TATGCCGTTACGTTAACGCTTACTCATCTTCATCGTGCGCCGGTTGCTCTTTAACAATGCGAACCAGA < 1:31801492/68‑1 TATGCCGTTACGTTAACGCTTACTCATCTTCATCGTGCGCCGGTTGCTCTTTAACAATGCGAACCAGA < 1:18046002/68‑1 TGCCGTTACGTTAACGCTTACTCATCTTCATCGTGCGCCGGTTGCTCTTTAACAATGCGAACCAGATC > 1:1125790/1‑68 TGCCGTTACGTTAACGCTTACTCATCTTCATCGTGCGCCGGTTGCTCTTTAACAATGCGAACCAGATC > 1:14448009/1‑68 TGCCGTTACGTTAACGCTTACTCATCTTCATCGTGCGCCGGTTGCTCTTTAACAATGCGAACCAGATC > 1:22608777/1‑68 TGCCGTTACGTTAACGCTTACTCATCTTCATCGTGCGCCGGTTGCTCTTTAACAATGCGAACCAGATC > 1:1767769/1‑68 GCCGTTACGTTAACGCTTACTCATCTTCATCGTGCGCCGGTTGCTCTTTAACAATGCGAACCAGATCA > 1:11332574/1‑68 GCCGTTACGTTAACGCTTACTCATCTTCATCGTGCGCCGGTTGCTCTTTAACAATGCGAACCAGATCA < 1:35773473/68‑1 GCCGTTACGTTAACGCTTACTCATCTTCATCGTGCGCCGGTTGCTCTTTAACAATGCGAACCAGATCA < 1:18112482/68‑1 GCCGTTACGTTAACGCTTACTCATCTTCATCGTGCGCCGGTTGCTCTTTAACAATGCGAACCAGATCA > 1:6030723/1‑68 GCCGTTACCTAAACGCTTACTCATATTCAACGTGAGCCGGTTGCTCTTTAACAATGCGAACCAGATCA > 1:21952726/1‑68 CCGTTACGTTAACGCTTACTCATCTTCATCGTGCGCCGGTTGCTCTTTAACAATGCGAACCAGATCA > 1:23654180/1‑67 CCGTTACGTTAACGCTTACTCATCTTCATCGTGCGCCGGTTGCTCTTTAACAATGCGAACCAGATCA > 1:27328462/1‑67 CCGTTACGTTAACGCTTACTCATCTTCATCGTGCGCCGGTTGCTCTTTAACAATGCGAACCAGATCA > 1:20655114/1‑67 CCGTTACGTTAACGCTTACTCATCTTCATCGTGCGCCGGTTGCTCTTTAACAATGCGAACCAGATCA > 1:28702859/1‑67 CCGTTACGTTAACGCTTACTCATCTTCATCGTGCGCCGGTTGCTCTTTAACAATGCGAACCAGATCA > 1:19420782/1‑67 CCGTTACGTTAACGCTTACTCATCTTCATCGTGCGCCGGTTGCTCTTT‑ACAATGCGAACCAGATCAAC > 1:5268619/1‑68 CCGTTACGTTAACGCTTACTAATCTTCATCGTGCGCCGGTTTCTCTTTAACAATCAGAACCAGATaa > 1:16648490/1‑65 CGTTACGTTAACGCTTACTCATCTTCATCGTGCGCCGGTTGCTCTTTAACAATGCGAACCAGATCAAC > 1:10804663/1‑68 GTTACGTTAACGCTTACTCATCTTCATCGTGCGCCGGTTGCTCTTTAACAATGCGAACCAGATCAAC > 1:18697913/1‑67 AAAGAGCAACCGGCGCACGATGAAGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCCATTATGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/1894318‑1894241‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccattatgccgTTACGTTAACGCTTACTCATCTTCATCGTGCGCCGGTTGCTCTTTAACAATGCGAACCAGATCAAC > CP009273/1894274‑1894339 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |