| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 2323869 = | 378 (0.850) | 20 (0.050) | 6/94 | NT | 5.5% | pseudogene (4013/4605 nt) | yfaS | pseudogene, bacterial alpha2‑macroglobulin YfaS variant family; putative membrane protein |
| ? | CP009273 | 2323928 = | 369 (0.990) | pseudogene (3954/4605 nt) | yfaS | pseudogene, bacterial alpha2‑macroglobulin YfaS variant family; putative membrane protein | |||||
Only 100 of 131 total aligned reads displayed.
AATATATGGCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTAACTGGAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/2323944‑2323869‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aactggaggCATTGTCGCCATATATTTCGCCAGCCAGTTCATGGCCAGCGCGCGCTCAATAGTGGATTGCTCAGCG > CP009273/2323928‑2323994 AATATATGGCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTA < 1:913469/68‑1AATATATGGCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTA < 1:18635376/68‑1AATATATGGCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTA < 1:19477516/68‑1AATATATGGCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTA < 1:21154068/68‑1AATATATGGCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTA < 1:10054929/68‑1AATATATGGCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTA < 1:25817134/68‑1AATATATGGCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTA < 1:26842315/68‑1AATATATGGCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTA < 1:27375131/68‑1AATATATGGCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTA < 1:15374464/68‑1AATATATGGCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTA < 1:31948921/68‑1AATATATGGCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTA < 1:32088616/68‑1AATATATGGCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTA < 1:36445078/68‑1AATATATGGCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTA < 1:8736893/68‑1AATATATGGCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTA < 1:7725731/68‑1AATATATGGCGACAATGCCTCCAGTTGGTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTA < 1:16024640/68‑1 ATATATGGCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTAA < 1:30766732/68‑1 ATATATGGCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTAA < 1:2927950/68‑1 ATATATGGCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTAA < 1:8011718/68‑1 ATATATGGCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTAA < 1:15455842/68‑1 ATATATGGCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTAA < 1:2133947/68‑1 ATATATGGCGACAATGCCTCCAGTTGGTTTGCCTGCGCCTGCGGGCGCATGGGGTAAACATAAGTTAA < 1:19299513/68‑1 TATATGGCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTAAC < 1:24158785/68‑1 TATATGGCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTAAC < 1:18859160/68‑1 TATATGGCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTAAC < 1:20611632/68‑1 TATATGGCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTAAC < 1:1693079/68‑1 TATATGGCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTAAC < 1:2355332/68‑1 TATATGGCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTAAC < 1:5622390/68‑1 TATATGGCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTAAC < 1:33848611/68‑1 TATATGGCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTAAC < 1:32245484/68‑1 TATATGGCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTA > 1:33334517/1‑66 TATATGGCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTA > 1:21500207/1‑66 TATATGGCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTA > 1:4919191/1‑66 TATATGGCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTA > 1:36548332/1‑66 TATATGGCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTA > 1:3649342/1‑66 TATATGGCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTA > 1:29488718/1‑66 TATATGGCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTA > 1:23670250/1‑66 TATATGGCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTA > 1:13302279/1‑66 ATATGGCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATTGGCTAAACATAAGTTAACT < 1:5393534/68‑1 ATATGGCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTA > 1:15054625/1‑65 ATATGGCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTA > 1:15370701/1‑65 ATATGGCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTA > 1:27259625/1‑65 ATATGGCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTA > 1:16109525/1‑65 TATGGCGACAATGCCTCAAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTAACTG < 1:23316327/68‑1 ATGGCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTAACTGG > 1:20395040/1‑68 ATGGCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTAACTGG < 1:3504453/68‑1 ATGGCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTAACTGG > 1:12303608/1‑68 ATGGCGACAATGCCTCCAGTTGTTTTGCCTGCGCCGGCGGGCGCATGGGCTACGCATAAGTTAACTGG > 1:24334525/1‑68 TGGCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTAACTGGA < 1:3937038/68‑1 GGCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGCCTAAACATAAGTTAACTGGAG > 1:35070939/1‑68 GGCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGCGCTAAACATAAGTTAACTGGAG > 1:5000174/1‑68 GCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCGTGGGCTAAACATAAGTTAACTGGAGG > 1:14617033/1‑68 GCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTAACTGGAGc > 1:19795025/1‑67 GCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTAACTGGAGG > 1:8616316/1‑68 GCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTAACTGGAGG > 1:11423175/1‑68 GCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTAACTGGAGG > 1:29246928/1‑68 GCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTAACTGGAGG > 1:29037227/1‑68 GCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTAACTGGAGG > 1:8290275/1‑68 GCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTAACTGGAGG > 1:12944589/1‑68 GCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTAACTGGAGG > 1:34713815/1‑68 GCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTAACTGGAGG > 1:17252814/1‑68 GCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTAACTGGAGG > 1:25511994/1‑68 GCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTAACTGGAGG > 1:24889049/1‑68 GCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTAACTGGAGG > 1:11687517/1‑68 GCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTAACTGGAGGCATTGTCG < 1:11192179/68‑1 GCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTAACTGGAGGCATTGTCG < 1:25536964/68‑1 GCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTAACTGGAGGCATTGTCG < 1:11234102/68‑1 CTCCCGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACAGAAGTTAACTGGAGGCATTGTCGCC < 1:16609973/68‑1 CTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTAACTGGAGGCATTGTCGC < 1:30570076/67‑1 CTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTAACTGGAGGCATTGTCGC < 1:10195152/67‑1 CTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTAACTGGAGGCATTGTCGC < 1:28379736/67‑1 CTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTAACTGGAGGCATTGTCGC < 1:17930803/67‑1 CTCCAGTTGGTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTAACTGGAGGCATTGTCGC < 1:25281938/67‑1 TGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTAACTGGAGGCATTGTCGCCATATA < 1:15553425/66‑1 TGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTAACTGGAGGCATTGTCGCCATATA < 1:15553437/66‑1 CTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTAACTGGAGGCATTGTCGCCATATATTTCGCCAG < 1:14775773/67‑1 CTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTAACTGGAGGCATTGTCGCCATATATTTCGCCAG < 1:12952037/67‑1 CTGCGGGCGCATGGGCTAAACATAAGTTAACTGGAGGCATTGTCGCCATATATTTCGCCAGCCAGTT < 1:5890140/67‑1 CTGCGGGCGCATGGGCTAAACATAAGTTAACTGGAGGCATTGGCGCCATATATTTCGCCAGCCAGTT < 1:22257570/67‑1 tggGGGCGCATGGGATAAAAAAAAGTTAACTGGAGGCATTGTCGCCATATATTTCGCCAGCCAGTTCA < 1:21378787/65‑1 AACTGGAGGCATTGTCGCCATATATTTCGCCAGCCAGTTCATGGCCAGCGCGCGCTCAATAGTGGATT < 1:15377023/68‑1 AACTGGAGGCATTGTCGCCATATATTTCGCCAGCCAGTTCATGGCCAGCGCGCGCTCAATAGTGGATT < 1:6626547/68‑1 ACTGGAGGCATTGTCGCCATATATTTCGCCCGCCAGTTCATGGCCAGCGCGCGCTCAATAGTGGATT > 1:22641834/1‑67 ACTGGAGGCATTGTCGCCATATATTTCGCCAGCCAGTTCATGGCCAGCGCGCGCTCAATAGTGGATT > 1:16962093/1‑67 CTGGAGGCATTGTCGCCATATATTTCGCCAGCCAGTTCATGGCCAGCGCGCGCTCAATAGTGGATTGC < 1:25297692/68‑1 CTGGAGGCATTGTCGCCATATATTTCGCCAGCCAGTTCATGGCCAGCGCGCGCTCAATAGTGGATTGC < 1:3959574/68‑1 CTGGAGGCATTGTCGCCATATATTTCGCCAGCCAGTTCATGGCCAGCGCGCGCTCAATAGTGGATTGC < 1:10290888/68‑1 TGGAGGCATTGTCGCCATATATTTCGCCAGCCAGTTCATGGCCAGCGCGCGCTCAATAGTGGATTGC > 1:15715157/1‑67 TGGAGGCATTGTCGCCATATATTTCGCCAGCCAGTTCATGGCCAGCGCGCGCTCAATAGTGGATTGC > 1:4244566/1‑67 TGGAGGCATTGTCGCCATATATTTCGCCAGCCAGTTCATGGCCAGCGCGCGCTCAATAGTGGATTGC > 1:20490734/1‑67 TGGAGGCATTGTCGCCATATATTTCGCCAGCCAGTTCATGGCCAGCGCGCGCTCAATAGTGGATTGC > 1:18110373/1‑67 TGGAGGCATTGTCGCCATATATTTCGCCAGCCAGTTCATGGCCAGCGCGCGCTCAATAGTGGATTGC > 1:28231115/1‑67 AGGCATTGTCGCCATATATTTCGCCAGCCAGTTCATGGCCCGCGCGCGCTCAATAGTGGATTGCTCA > 1:18539580/1‑67 AGGCATTGTCGCCATATATTTCGCCAGCCAGTTCATGGCCAGCGCGCGCTCAATAGTGGATTGCTCA > 1:4584905/1‑67 AGGCATTGTCGCCATATATTTCGCCAGCCAGTTCATGGCCAGCGCGCGCTCAATAGTGGATTGCTCA > 1:16494360/1‑67 AGGCATTGTCGCCATATATTTCGCCAGCCAGTTCATGGCCAGCGCGCGCTCAATAGTGGATTGCTCA > 1:33198757/1‑67 AGGCATTGTCGCCATATATTTCGCCAGCCAGTTCATGGCCAGCGCGCGCTCAATAGTGGATTGCTCA > 1:28402494/1‑67 GCATTGTCGCCATATATTTCGCCAGCCAGTTCATGGCCAGCGCGCGCTCAATAGTGGATTGCTCAGCG > 1:1260718/1‑68 GCATTGTCGCCATATATTTCGCCAGCCAGTTCATGGCCAGCGCGCGCTCAATAGTGGATTGCTCAGCG > 1:10645666/1‑68 GCATTGTCGCCATATATTTCGCCAGCCAGTTCATGGCCAGCGCGCGCTCAATAGTGGATTGCTCAGCG > 1:32420980/1‑68 GCATTGTCGCCATATATTTCGCCAGCCAGTTCATGGCCAGCGCGCGCTCAATAGTGGATTGCTCAGCG > 1:1440555/1‑68 AATATATGGCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTAACTGGAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/2323944‑2323869‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aactggaggCATTGTCGCCATATATTTCGCCAGCCAGTTCATGGCCAGCGCGCGCTCAATAGTGGATTGCTCAGCG > CP009273/2323928‑2323994 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |