| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 2848992 | 428 (0.960) | 22 (0.060) | 7/96 | NT | 5.5% | coding (1296/2079 nt) | fhlA | formate hydrogenlyase transcriptional activator |
| ? | CP009273 | = 2849010 | 389 (1.020) | coding (1314/2079 nt) | fhlA | formate hydrogenlyase transcriptional activator | |||||
CTCGGTGAAACTGGCACGGGTAAAGAGCTGATTGCCCGTGCGATCCATAATCTCAGTGGGCGTAATAATCGCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/2848918‑2848992‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atcgccgcGCAGTTCATTTTGACCATGCGGCGATTATTACGCCCACTGAGATTATGGATCGCACGGGCAATCA < CP009273/2849010‑2848946 CTCGGTGAAACTGGCACGGGTAAAGAGCTGATTGCCCGTGCGATCCATAATCTCAGTGGGCGTAATAA < 1:17374271/68‑1CTCGGTGAAACTGGCACGGGTAAAGAGCTGATTGCCCGTGCGATCCATAATCTCAGTGGGCGTAATAA > 1:31863424/1‑68CTCGGTGAAACTGGCACGGGTAAAGAGCTGATTGCCCGTGCGATCCATAATCTCAGTGGGCGTAATAA > 1:31101167/1‑68CTCGGTGAAACTGGCACGGGTAAAGAGCTGATTGCCCGTGCGATCCATAATCTCAGTGGGAGTAATAA > 1:6276125/1‑68 TCGGTGAAACTGGCACGGGTAAAGAGCTGATTGCCCGTGCGATCCATAATCTCAGTGGGCGTAATAAT < 1:22505540/68‑1 TCGGTGAAACTGGCACGGGTAAAGAGCTGATTGCCCGTGCGATCCATAATCTCAGTGGGCGTAATAAT < 1:4221244/68‑1 GGTGAAACTGGCACGGGTAAAGAGCTGATTGCCCGTGCGATCCATAATCTCAGTGGGCGTAATAATC > 1:19837653/1‑67 GGTGAAACTGGCACGGGTAAAGAGCTGATTGCCCGTGCGATCCATAATCTCAGTGGGCGTAATAATC > 1:32987383/1‑67 GGTGAAACTGGCACGGGTAAAGAGCTGATTGCCCGTGCGATCCATAATCTCAGTGGGCGTAATAATC > 1:28134865/1‑67 GGTGAAACTGGCACGGGTAAAGAGCTGATTGCCCGTGCGATCCATAATCTCAGTGGGCGTAATAATC > 1:15608726/1‑67 GTGAAACTGGCACGGGTAAAGAGCTGATTGCCCGTGCGATCCATAATCTCAGTGGGCGTAATAATCG > 1:10868420/1‑67 TGAAACTGGCACGGGTAAAGAGCTGATTGCCCGTGCGATCCATAATCTCAGTGGGCGTAATAATCGCC > 1:14086452/1‑68 TGAAACTGGCACGGGTAAAGAGCTGATTGCCCGTGCGATCCATAATCTCAGTGGGCGTAATAATCGCC > 1:8844136/1‑68 TGAAACTGGCACGGGTAAAGAGCTGATTGCCCGTGCGATCCATAATCTCAGTGGGCGTAATAATCGCC > 1:3920643/1‑68 TGAAACTGGCACGGGTAAAGAGCTGATTGCCCGTGCGATCCATAATCTCAGTGGGCGTAATAATCGCC > 1:35438104/1‑68 TGAAACTGGCACGGGTAAAGAGCTGATTGCCCGTGCGATCCATAATCTCAGTGGGCGTAATAATCGCC > 1:8242708/1‑68 TGAAACTGGCACGGGTAAAGAGCTGATTGCCCGTGCGATCCATAATCTCAGTGGGCGTAATAATCGCC > 1:24547509/1‑68 TGAAACTGGCACGGGTAAAGAGCTGATTGCCCGTGCGATCCATAATCTCAGTGGGCGTAATAATCGCC > 1:167424/1‑68 TGAAACTGGCACGGGTAAAGAGCTGATTGCCCGTGCGATCCATAATCTCAGTGGGCGTAATAATCGCC > 1:32529143/1‑68 TGAAACTGGCACGGGTAAAGAGCTGATTGCCCGTGCGATCCATAATCTCAGTGGGCGTAATAATCGCC > 1:7748438/1‑68 TGAAACTGGCACGGGTAAAGAGCTGATTGCCCGTGCGATCCATAATCTCAGTGGGCGTAATAATCGCC > 1:1197251/1‑68 TGAAACTGGCACGGGTAAAGAGCTGATTGCCCGTGCGATCCATAATCTCAGTGGGCGTAATAATCGC < 1:19298815/67‑1 GAAACTGGCACGGGTAAAGAGCTGATTGCCCGTGCGATCCATAATCTCAGTGGGCGTAATAATCGCCG < 1:21300465/68‑1 GAAACTGGCACGGGTAAAGAGCTGATTGCCCGTGCGATCCATAATCTCAGTGGGCGTAATAATCGCCG < 1:19998630/68‑1 GAAACTGGCACGGGTAAAGAGCTGATTGCCCGTGCGATCCATAATCTCAGTGGGCGTAATAATCGCC < 1:30751225/67‑1 GAAACTGGCACGGGTAAAGAGCTGATTGCCCGTGCGATCCATAATCTCAGTGGGCGTAATAATCGCC < 1:224928/67‑1 AACTGGCACGGGTAAAGAGCTGATTGCCCGTGCGATCCATAATCTCAGTGGGCGTAATAATCGCCGC < 1:29391556/67‑1 GATCCATAATCTCAGTGGGCGTTATAATCGCCGCGCAGTTCATTTTGCCCCTGCGGCGATTTTTAag > 1:2677510/1‑65 ATCTCAGTGGGCGTAATAATCGCCGCGCAGTTCATTTTGACCATGCGGCGATTATTACGCCCACTGAG > 1:128244/1‑68 TCTCAGTGGGCGTATTAATCGCCGCGCAGTTCATTTTGACCATGCGGCGATTATTACGCCCCCTGAGA > 1:27437574/1‑68 TCTCAGTGGGCGTAATAATCGCCGCGCAGTTGATTTTGCCCATGCGGCGATTATTACGCCCACTGAGA > 1:22222397/1‑68 TCTCAGTGGGCGTAATAATCGCCGCGCAGTTGATTTTGACCATGCGGCGATTATTACGCCCCCTGAGA > 1:21833680/1‑68 TCTCAGTGGGCGTAATAATCGCCGCGCAGTTCATTTTGACCATGCGGCGATTATTACGCCCGCTGAGA > 1:15721586/1‑68 TCTCAGTGGGCGTAATAATCGCCGCGCAGTTCATTTTGACCATGCGGCGATTATTACGCCCACTGAGA > 1:23324879/1‑68 TCTCAGTGGGCGTAATAATCGCCGCGCAGTTCATTTTGACCATGCGGCGATTATTACGCCCACTGAGA > 1:9535708/1‑68 TCTCAGTGGGCGTAATAATCGCCGCGCAGTTCATTTTGACCATGCGGCGATTATTACGCCCACTGAGA > 1:24840608/1‑68 TCTCAGTGGGCGTAATAATCGCCGCGCAGTTCATTTTGACCATGCGGCGATTATTACGCCCACGGAGA > 1:16490847/1‑68 TCTCAGTGGGCGTAATAATCGCCGCGCAGGTCAGTTTGCCCATGCGGCGATTATTACGCCCACTGAGc > 1:7767229/1‑67 CTCAGTGGGCGTAATAATCGCCGCGGAGTTCATTTTGACCATGCGGGGATTTTTTCGCCCACTGAGtg > 1:12675354/1‑66 CTCAGTGGGCGTAATAATCGCCGCGCAGTTGATTTTGACCATGCGGCGATTATTACGCCCACTGAGAT > 1:18655517/1‑68 CTCAGTGGGCGTAATAATCGCCGCGCAGTTCATTTTGCCCATGCGGCGATTATTACGCCCCCTGAGAT > 1:30341316/1‑68 CTCAGTGGGCGTAATAATCGCCGCGCAGTTCATTTTGAGCATGCGGCGATTATTACGCCCACTGAGAT > 1:4770196/1‑68 CTCAGTGGGCGTAATAATCGCCGCGCAGTTCATTTTGACCATGCGGCGATTATTACGCCCACTGAGct > 1:27562458/1‑66 CTCAGTGGGCGTAATAATCGCCGCGCAGTTCATTTTGACCATGCGGCGATTATTACGCCCACTGAGAT > 1:4481456/1‑68 CTCAGTGGGCGTAATAATCGCCGCGCAGTTCATTTTGACCATGCGGCGATTATTACGCCCACTGAGAT > 1:36806324/1‑68 TCAGTGGGCGTAATAATCGCCGCGCAGTTCATTTTGACCATGCGGCGATTATTACGCCCACTGAGATT > 1:22281/1‑68 CAGTGGGCGTAATAATCGCCGCGCAGTTCATTTTGACCATGCGGCGCTGATTACGCCCACGGGGATTA > 1:35563023/1‑68 AGTGGGCGTAATAATCGCCGCGCAGTTCATTTTGACCATGCGGCGATTATTACGCGCACTGAGATTAT > 1:32835795/1‑68 GGCGTAATAATCGCCGCGCAGTTCATTTTGACCATGCGGCGATTATTACGCCCACGGAGATTATGGA > 1:12673201/1‑67 AATCGCCGCGCAGTTCATTTTGACCATGCGGCGATTATTACGCCCACTGAGATTATGGATCGCACGG > 1:3985303/1‑67 AATCGCCGCGCAGTTCATTTTGACCATGCGGCGATTATTACGCCCACTGAGATTATGGATCGCACGG > 1:33154059/1‑67 AATCGCCGCGCAGTTCATTTTGACCATGCGGCGATTATTACGCCCACTGAGATTATGGATCGCACGG > 1:29955626/1‑67 ATCGCCGCGCAGTTCATTTTGACCATGCGGCGATTATTACGCCCACTGAGATTATGGATCGCACGGGC < 1:1201535/68‑1 ATCGCCGCGCAGTTCATTTTGACCATGCGGCGATTATTACGCCCACTGAGATTATGGATCGCACGGGC < 1:31956275/68‑1 ATCGCCGCGCAGTTCATTTTGACCATGCGGCGATTATTACGCCCACTGAGATTATGGATCGCACGGGC < 1:12281802/68‑1 ATCGCCGCGCAGTTCATTTTGACCATGCGGCGATTATTACGCCCACTGAGATTATGGATCGCACGGGC < 1:35136326/68‑1 ATCGCCGCGCAGTTCATTTTGACCATGCGGCGATTATTACGCCCACTGAGATTATGGATCGCACGGGC < 1:11097666/68‑1 ATCGCCGCGCAGTTCATTTTGACCATGCGGCGATTATTACGCCCACTGAGATTATGGATCGCACGGGC < 1:34471474/68‑1 ATCGCCGCGCAGTTCATTTTGACCATGCGGCGATTATTACGCCCACTGAGATTATGGATCGCACGGGC > 1:26316672/1‑68 ATCGCCGCGCAGTTCATTTTGACCATGCGGCGATTATTACGCCCACTGAGATTATGGATCGCACGGGC < 1:15799660/68‑1 ATCGCCGCGCAGTTCATTTTGACCATGCGGCGATTATTACGCCCACTGAGATTATGGATCGCACGGGC < 1:26089228/68‑1 ATCGCCGCGCAGTTCATTTTGACCATGCGGCGATTATTACGCCCACTGAGATTATGGATCGCACGGGC > 1:24048054/1‑68 ATCGCCGCGCAGTTCATTTTGACCATGCGGCGATTATTACGCCCACTGAGATTATGGATCGCACGGGC > 1:23490921/1‑68 ATCGCCGCGCAGTTCATTTTGACCATGCGGCGATTATTACGCCCACTGAGATTATGGATCGCACGGGC < 1:22901094/68‑1 ATCGCCGCGCAGTTCATTTTGACCATGCGGCGATTATTACGCCCACTGAGATTATGGATCGCACGGGC < 1:5385948/68‑1 ATCGCCGCGCAGTTCATTTTGACCATGCGGCGATTATTACGCCCACTGAGATTATGGATCGCACGGGC < 1:20354164/68‑1 ATCGCCGCGCAGTTCATTTTGACCATGCGGCGATTATTACGCCCACTGAGATTATGGATCGCACGGG < 1:26250758/67‑1 ATCGCCGCGCAGTTCATTTTGACCATGCGGCGATTATTACGCCCACTGAGATTATGGATCGCACGGG < 1:5974403/67‑1 ATCGCCGCGCAGTTCATTTTGACCATGCGGCGATTATTACGCCCACTGAGATTATGGATCGCACGGG < 1:29834701/67‑1 ATCGCCGCGCAGTTCATTTTGACCATGCGGCGATTATTACGCCCACTGAGATTATGGATCGCACGGG < 1:33791689/67‑1 ATCGCCGCGCAGTTCATTTTGACCATGCGGCGATTATTACGCCCACTGAGATTATGGATCGCACGGG < 1:12225910/67‑1 ATCGCCGCGCAGTTCATTTTGACCATGCGGCGATTATTACGCCCACTGAGATT‑TGGATCGCACGGGCA > 1:26626610/1‑68 ATCGCAGCGCAGTTCATTTTGACCATGCGGCGATTATTACGCCCACTGAGATTATGGATCGCACGGG < 1:32381074/67‑1 TCGCCGCGCAGTTCATTTTGACCATGCGGCGATTATTACGCCCACTGAGATTATGGATCGCACGGGCA < 1:27740959/68‑1 TCGCCGCGCAGTTCATTTTGACCATGCGGCGATTATTACGCCCACTGAGATTATGGATCGCACGGGCA < 1:23667497/68‑1 TCGCCGCGCAGTTCATTTTGACCATGCGGCGATTATTACGCCCACTGAGATTATGGATCGCACGGGCA < 1:1689640/68‑1 CGCCGCGCAGTTCATTTTGACCATGCGGCGATTATTACGCCCACTGAGATTATGGATCGCACGGGCAA < 1:26311465/68‑1 CGCCGCGCAGTTCATTTTGACCATGCGGCGATTATTACGCCCACTGAGATTATGGATCGCACGGGCAA < 1:21296078/68‑1 CGCCGCGCAGTTCATTTTGACCATGCGGCGATTATTACGCCCACTGAGATTATGGATCGCACGGGCAA < 1:12894098/68‑1 CGCCGCGCAGTTCATTTTGACCATGCGGCGATTATTACGCCCACTGAGATTATGGATCGCACGGGCAA < 1:8547050/68‑1 CGCCGCGCAGTTCATTTTGACCATGCGGCGATTATTACGCCCACTGAGATTATGGATCGCACGGGCAA < 1:18514935/68‑1 CCGCGCAGTTCATTTTGACCATGCGGCGATTATTACGCCCACTGAGATTATGGATCGCACGGGCAATC > 1:9621327/1‑68 CCGCGCAGTTCATTTTGACCATGCGGCGATTATTACGCCCACTGAGATTATGGATCGCACGGGCAATC > 1:16453582/1‑68 CCGCGCAGTTCATTTTGACCATGCGGCGATTATTACGCCCACTGAGATTATGGATCGCACGGGCAATC > 1:18345836/1‑68 CCGCGCAGTTCATTTTGACCATGCGGCGATTATTACGCCCACTGAGATTATGGATCGCACGGGCAATC > 1:20938045/1‑68 CGCGCAGTTCATTTTGACCATGCGGCGATTATTACGCCCACTGAGATTATGGATCGCACGGGCAATCA < 1:18791878/68‑1 CGCGCAGTTCATTTTGACCATGCGGCGATTATTACGCCCACTGAGATTATGGATCGCACGGGCAATCA > 1:10462877/1‑68 CGCGCAGTTCATTTTGACCATGCGGCGATTATTACGCCCACTGAGATTATGGATCGCACGGGCAATCA < 1:28796842/68‑1 CTCGGTGAAACTGGCACGGGTAAAGAGCTGATTGCCCGTGCGATCCATAATCTCAGTGGGCGTAATAATCGCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/2848918‑2848992‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atcgccgcGCAGTTCATTTTGACCATGCGGCGATTATTACGCCCACTGAGATTATGGATCGCACGGGCAATCA < CP009273/2849010‑2848946 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |