| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 3133702 = | 412 (0.930) | 16 (0.040) | 11/96 | NT | 5.1% | coding (457/489 nt) | hybE | hydrogenase 2‑specific chaperone |
| ? | CP009273 | 3133721 = | 246 (0.640) | coding (438/489 nt) | hybE | hydrogenase 2‑specific chaperone | |||||
Only 100 of 158 total aligned reads displayed.
TGACTGCGCACGAATGATCCTTTCGCTGCCAGTCACGAATCCGGATGTACCACACGCAGGGCGTCGCGCCCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/3133775‑3133702‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccctgc‑GTGTGGTACATCCGGATTCGTGACTGGCAGCGAAAGGATCATTCGTGCGCAGTCATCCGTCAGGCGT > CP009273/3133721‑3133787 TGACTGCGCACGAATGGTCCTTTCGCTGCCAGTCACGAATCCGGATGTACCACACGCAGGGCGTCGC < 1:12975837/67‑1TGACTGCGCACGAATGATCCTTTCGCTGCCAGTCACGAATCCGGATGTACCACACGCAGGGCGTCGC < 1:9166787/67‑1TGACTGCGCACGAATGATCCTTTCGCTGCCAGTCACGAATCCGGATGTACCACACGCAGGGCGTCGC < 1:15699676/67‑1TGACTGCGCACGAATGATCCTTTCGCTGCCAGTCACGAATCCGGATGTACCACACGCAGGGCGTCGC < 1:35135411/67‑1TGACTGCGCACGAATGATCCTTTCGCTCCCAGTCACGAATCCGGATGTACCACACGCAGGGCGTCGC < 1:11948271/67‑1 GACTGCGCACGAATGATCCTTTCGCTGCCAGTCACGAATCCGGATGTACCANACGCAGGGCGTCGCGC < 1:16578722/68‑1 GACTGCGCACGAATGATCCTTTCGCTGCCAGTCACGAATCCGGATGTACCACACGCAGGGCGTCGCGC < 1:10369448/68‑1 GACTGCGCACGAATGATCCTTTCGCTGCCAGTCACGAATCCGGATGTACCACACGCAGGGCGTCGCGC < 1:10398126/68‑1 GACTGCGCACGAATGATCCTTTCGCTGCCAGTCACGAATCCGGATGTACCACACGCAGGGCGTCGCGC < 1:10987143/68‑1 GACTGCGCACGAATGATCCTTTCGCTGCCAGTCACGAATCCGGATGTACCACACGCAGGGCGTCGCGC < 1:19784339/68‑1 GACTGCGCACGAATGATCCTTTCGCTGCCAGTCACGAATCCGGATGTACCACACGCAGGGCGTCGCGC < 1:22246120/68‑1 GACTGCGCACGAATGATCCTTTCGCTGCCAGTCACGAATCCGGATGTACCACACGCAGGGCGTCGCGC < 1:27513822/68‑1 GACTGCGCACGAATGATCCTTTCGCTGCCAGTCACGAATCCGGATGTACCACACGCAGGGCGTCGCG > 1:15455323/1‑67 GACTGCGCACGAATGATCCTTTCGCTGCCAGTCACGAATCCGGATGTACCACACGCAGGGCGTCGCG > 1:23364832/1‑67 GACTGCGCACGAATGATCCTTTCGCTGCCAGTCACGAATCCGGATGTACCACACGCAGGGCGTCGCG > 1:26814706/1‑67 GACTGCGCACGAATGATCCTTTCGCTGCCAGTCACGAATCAGGATGTACCACACGCAGGGCGTCGCGC < 1:34239665/68‑1 GACTGCGCACGAATGATCCTATCGCTGCCAGTCACGAATCCGGATGTACCACACGCAGGGCGTCGCGC < 1:22353241/68‑1 ACTGCGCACGAATGATCCTTTCGCTGCCAGTCACGAATCCGGATGTACCACACGCAGGGCGTCGCGC > 1:33192413/1‑67 ACTGCGCACGAATGATCCTTTCGCTGCCAGTCACGAATCCGGATGTACCACACGCAGGGCGTCGCGC > 1:26657663/1‑67 ACTGCGCACGAATGATCCTTTCGCTGCCAGTCACGAATCCGGATGTACCACACGCAGGGCGTCGCGC > 1:36246424/1‑67 ACTGCGCACGAATGATCCTTTCGCTGCCAGTCACGAATCCGGATGTACCACACGCAGGGCGTCGCGC > 1:3726005/1‑67 ACTGCGCACGAATGATCCTTTCGCTGCCAGTCACGAATCCGGATGTACCACACGCAGGGCGTCGCGC > 1:6603335/1‑67 ACTGCGCACGAATGATCCTTTCGCTGCCAGTCACGAATCCGGATGTACCACACGCAGGGCGTCGCGC > 1:7511216/1‑67 ACTGCGCACGAATGATCCTTTCGCTGCCAGTCACGAATCCGGATGTACCACACGCAGGGCGTCGCGC > 1:17974420/1‑67 ACTGCGCACGAATGATCCTTTCGCTGCCAGTCACGAATCCGGATGTACCACACGCAGGGCGTCGCGC > 1:8470672/1‑67 ACTGCGCACGAATGATCCTTTCGCTGCCAGTCACGAATCCGGATGTACCACACGCAGGGCGTCGCGC > 1:171689/1‑67 ACTGCGCACGAATGATCCTTTCGCTGCCAGTCACGAATCCGGATGTACCACACGCAGGGCGTCGCGC > 1:16533234/1‑67 ACTGCGCACGAATGATCCTTTCGCTGCCAGTCACGAATCCGGATGTACCACACGCAGGGCGTCGCGC > 1:15044859/1‑67 ACTGCGCACGAATGATCCTTTCGCTGCCAGTCACGAATCCGGATGTACCACACGCAGGGCGTCGCGC > 1:1120869/1‑67 ACTGCGCACGAATGATCCTTTCGCTGCCAGTCACGAATCCGGATGTACCACACGCAGGGCGTCGCGC > 1:16372123/1‑67 ACTGCGCACGAATGATCCTTTCGCTGCCAGTCACGAATCCGGATGTACCACACGCAGGGCGTCGCGC > 1:15283392/1‑67 CTGCGCACGAATGATCCTTTCGCTGCCAGTCACGAATCCGGATGTACCACACGCAGGGCGTCGCGCC < 1:18831746/67‑1 CTGCGCACGAATGATCCTTTCGCTGCCAGTCACGAATCCGGATGTACCACACGCAGGGCGTCGCGC > 1:16732068/1‑66 CTGCGCACGAATGATCCTTTCGCTGCCAGTCACGAATCCGGATGTACCACACGCAGGGCGTCGCGC > 1:18510747/1‑66 TGCGCACGAATGATCCTTTCGCTGCCAGTCACGAGTCCGGATGTACCACACGCAGGGCGTCGCGCCCT < 1:2993460/68‑1 TGCGCACGAATGATCCTTTCGCTGCCAGTCACGAATCGGGATGTACCACACGCAGGGCGTCGCGCCCT < 1:32750429/68‑1 TGCGCACGAATGATCCTTTCGCTGCCAGTCACGAATCCGGATGTACCACACGCAGGGCGTCGCGCCCT < 1:28905779/68‑1 TGCGCACGAATGATCCTTTCGCTGCCAGTCACGAATCCGGATGTACCACACGCAGGGCGTCGCGCCCT < 1:27362924/68‑1 TGCGCACGAATGATCCTTTCGCTGCCAGTCACGAATCCGGATGTACCACACGCAGGGCGTCGCGCCCT < 1:31588638/68‑1 TGCGCACGAATGATCCTTTCGCTGCCAGTCACGAATCCGGATGTACCACACGCAGGGCGTCGCGCCCT < 1:24720567/68‑1 TGCGCACGAATGATCCTTTCGCTGCCAGTCACGAATCCGGATGTACCACACGCAGGGCGTCGCGCCCT < 1:23013807/68‑1 TGCGCACGAATGATCCTTTCGCTGCCAGTCACGAATCCGGATGTACCACACGCAGGGCGTCGCGCCCT < 1:22759337/68‑1 TGCGCACGAATGATCCTTTCGCTGCCAGTCACGAATCCGGATGTACCACACGCAGGGCGTCGCGCCCT < 1:14969575/68‑1 TGCGCACGAATGATCCTTTCGCTGCCAGTCACGAATCCGGATGTACCACACGCAGGGCGTCGCGCCCT < 1:1990737/68‑1 TGCGCACGAATGATCCTTTCGCTGCCAGTCACGAATCCGGATGTACCACACGCAGGGCGTCGCGCCCT < 1:4821811/68‑1 TGCGCACGAATGATCCTTTCGCTGCCAGTCACGAATCCGGATGTACCACACGCAGGGCGTCGCGCCCT < 1:4759549/68‑1 TGCGCACGAATGATCCTTTCGCTGCCAGTCACGAATCCGGATGTACCACACGCAGGGCGTCGCGCCCT < 1:33079096/68‑1 TGCGCACGAATGATCCTTTCGCTGCCAGTCACGAATCCGGATGTACCACACGCAGGGCGTCGCGC > 1:34566082/1‑65 TGCGCACGAATGATCCTTTCGCTGCCAGTCACGAATCCGGATGTACCACACGCAGGGCGTCGCGC > 1:14271364/1‑65 TGCGCACGAATGATCCTTTCGCTGCCAGTCACGAATCCGGATGTACCACACGCAGGGCGTCGCGC > 1:3254469/1‑65 TGCGCACGAATGATCCTTTCGCTGCCAGTCACGAATCCGGATGTACCACACGCAGGGCGTCGCGC > 1:15149614/1‑65 TGCGCACGAATGATCCTTTCGCTGCCAGTCACGAATCCGGATGTACCACACGCAGGGCGTCGCGC > 1:3350551/1‑65 TGCGCACGAATGATCCTTTCGCTGCCAGTCACGAATCCGGATGTACCACACGCAGGGCGTCGCGC > 1:10229538/1‑65 TGCGCACGAATGATCCTTTCGCTGCCAGTCACGAATCCGGATGTACCACACGCAGGGCGTCGCGC > 1:2938844/1‑65 GCGCACGAATGATCCTTTCGCTGCCAGTCACGAATCCGGATGTACCACACGCAGGGCGTCGCGCCCT > 1:32165883/1‑67 GCGCACGAATGATCCTTTCGCTGCCAGTCACGAATCCGGATGTACCACACGCAGGGCGTCGCGCCCT > 1:2965895/1‑67 GCACGAATGATCCTTTCGCTGCCAGTCACGAATCCGGATGTACCACACGCAGGGCGTCGCGCCCTGC < 1:32873167/67‑1 GCACGAATGATCCTTTCGCTGCCAGTCACGAATCCGGATGTACCACACGCAGGGCGTCGCGCCCTGC < 1:30736031/67‑1 GCACGAATGATCCTTTCGCTGCCAGTCACGAATCCGGATGTACCACACGCAGGGCGTCGCGCCCTGC < 1:17189699/67‑1 GCACGAATGATCCTTTCGCTGCCAGTCACGAATCCGGATGTACCACACGCAGGGCGTCGCGCCCTGC < 1:15981301/67‑1 GCACGAATGATCCTTTCGCTGCCAGTCACGAATCCGGATGTACCACACGCAGGGCGTCGCGCCCTGC < 1:21401726/67‑1 GCACGAATGATCCTTTCGCTGCCAGTCACGAATCCGGATGTACCACACGCAGGGCGTCGCGCCCTGC < 1:2507484/67‑1 CACGAATGATCCTTTCGCTGCCAGTCACGAATCCGGATGTACCACACGCAGGGCGTCGCGCCCT > 1:22443391/1‑64 ACGAATGATCCTTTCGCTGCCAGTCACGAATCCGGATGTACCACACGCAGGGCGTCGCGCCCTGC‑GT < 1:6351636/67‑1 ACGAATGATCCTTTCGCTGCCAGTCACGAATCCGGATGTACCACACGCAGGGCGTCGCGCCCTGC‑GT < 1:2172648/67‑1 cATCCTTTCGCCCCCAGTCACGAATCCGGATGTACCACACCCAGGGCGTCGCGCCCTGC‑GTGTGGTAC < 1:888603/67‑1 TTCGCTGCCAGTCACGAATCCGGATGTACCACACGCCGGGCGTCGCGCCCTGC‑GTGTGGTACATCCGG < 1:30816300/68‑1 TCCGGATGCACCACACGCCGGGCGGCGCGCCCTGC‑GTGTGGTACATCCGGATTCGTGACTGGCAGCGA < 1:12522225/68‑1 ATGTACCACACGCAGGGCGTCGCGCCCTGC‑GTGTGGTACATCCGGATTCGTGACTGGCAGCGAAAGGA > 1:30288921/1‑68 TACCACACGCAGGGCGTCGCGCCCTGC‑GTGTGGTACATCCGGATTCGTGACTGGCAGCGAAAGGATCA > 1:8985642/1‑68 TACCACACGCAGGGCGTAGCGCCCTGC‑GGGTGGTACATCCGGATTCGTGACTGGAAGCGAAAGGATCA > 1:31766672/1‑68 ACCACACGCAGGGCGTCGCGCCCTGC‑GTGTGGTACATCCGGATTCGTGACTGGCAGCGAAAGGATCAT > 1:7168873/1‑68 ACGCAGGGCGTCGCGCCCTGCTGTTTGGTACATCCGGATTCGTGACTGGCAGCGAAAGGATCATTCGT > 1:10759530/1‑68 ACGCAGGGCGTCGCGCCCTGC‑GTGTGGTACATCCGGATTCGTGACTGGCAGCGAAAGGATCATTCGT > 1:20287127/1‑67 GCAGGGCGTCGCGCCCTGCTGTTTGGTACATCCGGATTCGTGACTGGCAGCGAAAGGATCATTCGTGC > 1:694594/1‑68 GCAGGGCGTCGCGCCCTGCTGTTTGGTACATCCGGATTCGTGACTGGCAGCGAAAGGATCATTCGTGC > 1:22435882/1‑68 GCAGGGCGTCGCGCCCTGC‑GTGTGGTACATCCGGATTCGTGACTGGCAGCGAAAGGATCATTCGTGC > 1:10198025/1‑67 GGCGTCGCGCCCTGC‑GTGTGGTACATCCGGATTCGTGACTGGCAGCGAAAGGATCATTCGTGCGCAG > 1:7040982/1‑67 GCGTCGCGCCCTGCTGTTTGGTACATCCGGATTCGTGACTGGCAGCGAAAGGATCATTCGTGCGCAG > 1:29383388/1‑67 CGCCCTGC‑GTGTGGTACATCCGGATTCGTGACTGGCAGCGAAAGGATCATTCGTGCGCAGTCATCCGT < 1:14688736/68‑1 CGCCCTGC‑GTGTGGTACATCCGGATTCGTGACTGGCAGCGAAAGGATCATTCGTGCGCAGTCATCCG < 1:24137704/67‑1 CGCCCTGC‑GTGTGGTACATCCGGATTCGTGACTGGCAGCGAAAGGATCATTCGTGCGCAGTCATCCG > 1:11956064/1‑67 CGCCCTGC‑GTGTGGTACATCCGGATTCGTGACTGGCAGCGAAAGGATCATTCGTGCGCAGTCATCCG < 1:32823118/67‑1 CGCCCTGC‑GTGTGGTACATCCGGATTCGTGACTGGCAGCGAAAGGATCATTCGTGCGCAGTCATCCG < 1:8256801/67‑1 CGCCCTGC‑GTGTGGTACATCCGGATTCGTGACTGGCAGCGAAAGGATCATTCGTGCGCAGTCATCCG < 1:31978481/67‑1 CGCCCTGC‑GTGTGGTACATCCGGATTCGTGACTGGCAGCGAAAGGATCATTCGTGCGCAGTCATCCG > 1:2704481/1‑67 CGCCCGGC‑GTGTGGTACATCCGGATTCGTGACTGGCAGCGAAAGGATCATTCGTGCGCAGTCATCCG < 1:18023118/67‑1 GCCCTGC‑GTGTGGTACATCCGGATTCGTGCCTGGCAGCGAAAGGATCATTCGTGCGCAGTCATCCGTC > 1:14334843/1‑68 GCCCTGC‑GTGTGGTACATCCGGATTCGTGACTGGCAGCGAAAGGATCATTCGTGCGCAGTCATCCGTC > 1:31797873/1‑68 GCCCTGC‑GTGTGGTACATCCGGATTCGTGACTGGCAGCGAAAGGATCATTCGTGCGCAGTCATCCGTC > 1:8558630/1‑68 GCCCTGC‑GTGTGGTACATCCGGATTCGTGACTGGCAGCGAAAGGATCATTCGTGCGCAGTCATCCGTC > 1:2687703/1‑68 CCTGC‑GTGTGGTACATCCGGATTCGTGACTGGCAGCGAAAGGATCATTCGTGCGCAGTCATCCGTCAG > 1:1572885/1‑68 CTGC‑GTGTGGTACATCCGGATTCGTGACTGGCAGCGAAAGGATCATTCGTGCGCAGTCATCCGTCAGG < 1:28682547/68‑1 CTGC‑GTGTGGGACATCCGGATTCGTGACTGGCAGCGAAAGGATCATTCGTGCGCAGTCATCCGTCAGG < 1:26895815/68‑1 gGC‑GTGGGGAACAGCCGGATTCGTGACTGGCAGCGAAAGTATCATTCGTGCGCAGTCATCCGTCAGGC < 1:7522411/67‑1 TGC‑GTGTGGTACATCCGGATTCGTGACTGGCAGCGAAAGGATCATTCGTGCGCAGTCATCCGTCAGGC < 1:25637775/68‑1 GC‑GTGTGGTACATCCGGATTCGTGACTGGCAGCGAAAGGATCATTCGTGCGCAGTCATCCGTCAGGCG < 1:3871682/68‑1 GC‑GTGTGGTACATCCGGATTCGTGACTGGCAGCGAAAGGATCATTCGTGCGCAGTCATCCGTCAGGCG < 1:35066355/68‑1 GC‑GTGTGGTACATCCGGATTCGTGACTGGCAGCGAAAGGATCATTCGTGCGCAGTCATCCGTCAGGCG < 1:2416877/68‑1 GC‑GTGTGGTACATCCGGATTCGTGACTGGCAGCGAAAGGATCATTCGTGCGCAGTCATCCGTCAGGCG > 1:19207713/1‑68 TGACTGCGCACGAATGATCCTTTCGCTGCCAGTCACGAATCCGGATGTACCACACGCAGGGCGTCGCGCCCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/3133775‑3133702‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccctgc‑GTGTGGTACATCCGGATTCGTGACTGGCAGCGAAAGGATCATTCGTGCGCAGTCATCCGTCAGGCGT > CP009273/3133721‑3133787 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |