| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 3215213 = | 264 (0.590) | 29 (0.080) | 10/96 | NT | 10.9% | coding (389/984 nt) | ebgR | transcriptional repressor |
| ? | CP009273 | 3215274 = | 250 (0.660) | coding (450/984 nt) | ebgR | transcriptional repressor | |||||
Only 100 of 115 total aligned reads displayed.
CCACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/3215287‑3215213‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcagcggTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCAACCA > CP009273/3215274‑3215339 cccCCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTG > 1:35578007/4‑68CCACCGCATCGTGACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTG > 1:24032147/1‑68CCACCGCATCGTAACCGCTGCCGTGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTG > 1:6860564/1‑68CCACCGCATCGTAACCGCTGCCGGGTTGGTGAAAGTCGATAAAACAGATATTGTCGGTCTACGCGCTG > 1:12142283/1‑68CCACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTG > 1:6517018/1‑68CCACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTG > 1:22724271/1‑68CCACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTG < 1:36875567/68‑1CCACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTG > 1:22951588/1‑68CCACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTG > 1:5445059/1‑68CCACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTG > 1:2021765/1‑68CCACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTG > 1:19749196/1‑68CCACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTG > 1:17201601/1‑68CCACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTG > 1:16602222/1‑68CCACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTG > 1:7427/1‑68CCACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTG > 1:14812455/1‑68CCACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTG > 1:14215783/1‑68CCACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTG > 1:14309977/1‑68CCACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTG > 1:8642430/1‑68CCACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTG > 1:7960118/1‑68CCACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTG > 1:7915657/1‑68CCACCGCATCGTAACCGCTGCCGGGATCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTG > 1:9643267/1‑68 CACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGAGAAAACAGATATTGTCGGTCAACGCGCTG > 1:34730501/1‑67 ACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGC > 1:6384525/1‑68 ACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGC > 1:939376/1‑68 ACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGC > 1:20082114/1‑68 ACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGC > 1:20678443/1‑68 ACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGC > 1:35182443/1‑68 ACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGC > 1:21144946/1‑68 CCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCA > 1:12890410/1‑68 CCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCA > 1:10804751/1‑68 GCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGC < 1:19455169/68‑1 ATCGTAACCGCTGCCGGGTTCGTGAAAGTGGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCG > 1:22478591/1‑67 ATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCG < 1:18110790/67‑1 ATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCG < 1:21929517/67‑1 ATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCG < 1:3732521/67‑1 ATCGTAACCGCTGCCGGGTTCGTGAAAGGCGAAAAAACAGATATTGTCGGTCAACGCGCTGGCAGCGG < 1:5923944/68‑1 TCGTACCCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCGGT < 1:7623579/68‑1 TCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCGGT < 1:15588750/68‑1 TCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCGGT < 1:2386023/68‑1 TCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCGGT < 1:26185795/68‑1 TCGTAACCCCTGCCGGGTTCGTGAAAGTCGCTAAAACAGATATAGTCGGTCACCGCGCTGGCAGCGGT < 1:5905107/68‑1 CGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGGCAACGCGCTGGCAGCGGTT < 1:11262798/68‑1 AACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGGCAACGCGCTGGCAGCGGTTACG < 1:10556062/68‑1 AACCGCGGCCGGGTTCGGGAAAGTCGATAAAACAGAAATTGTCGGTCAACGCGCTGGCCGCGGTTAC < 1:15372789/67‑1 CCGCTGCCGGGAGCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCGGTTACGAT < 1:9868383/68‑1 GCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCGGTTACGATGC < 1:4549485/68‑1 GCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCGGTTACGATGC < 1:33117891/68‑1 GCTGCCGGGTTCGTGAAAGGCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCGGTTACGATGC < 1:1861574/68‑1 tcCCGGGAGCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCGGTTACGATGCGG < 1:36375666/66‑1 gGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGGCAACGCGCTGGCAGCGGTTACGATGCGG < 1:12141331/67‑1 cGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCGGTTACGATGCGG < 1:5574670/67‑1 TGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCGGTTACGATGCGG < 1:23008768/68‑1 GCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCGGTTACGATGCGGT < 1:36093025/68‑1 GCCGGGTTCGTGAAAGGCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCGGTTACGATGCGGT < 1:10633314/68‑1 GCCGCGCTCGTGATAGTCGATACAACAGATATTGTCGGGCAACGCGCTGGCAGCGGTTACGATGCGGT < 1:17931186/68‑1 CCGGGTTCGTGAAAGGCGATAAAACAGATATGGTCGGTCAACGCGCTGGCAGCGGTTACGATGCGGT < 1:19317654/67‑1 CCGGGTGCGTGAAAGCCGATAAAACAGATATTGGCGGTCAACGCGCTGGCAGCGGTTACGATGCGGT < 1:8035727/67‑1 CGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCGGTTACGATGCGGTGG < 1:31407192/68‑1 CGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCGGTTACGATGCGGTGG < 1:35572327/68‑1 CGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCGGTTACGATGCGGTGG < 1:27197168/68‑1 CGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCGGTTACGATGCGGTG < 1:4334309/67‑1 CGGGTTCGTGAAAGTCGATAAAACAGATATTGGCGGTCACCGCGCTGGCAGCGGTTACGATGCGGTGG < 1:27795769/68‑1 CGGGTTCGTGAAAGTCGATAAAACAGATATTGGCGGTCAACGCGCTCGCAGCGGTTACGATGCGGTGG < 1:8789935/68‑1 CGGGTCCGTGAAAGGCGATAAAACAGATATTGGCGGTCAACGCGCTGGCAGCGGTTACGATGCGGTGG < 1:9555151/68‑1 GGGTTCGTCAACCTCGATAACACAGATATTGCCGGGCAACGCGCTGGCAGCGGTTACGATGCGGTGGA < 1:26922709/68‑1 GTTCGTGAAAGTCGATAAAACAGATATTGTCGGGCAACGCGCTGGCAGCGGTTACGATGCGGTGGAT < 1:21621278/67‑1 CGTGAAAGTCCATAAAACCGATACTGTCGGGCCACGCGCTGGCAGCGGTTACGATGCGGTGGATATCG < 1:28783186/68‑1 GTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCGGTTACGATGCGGTGGATATCGA < 1:7901990/68‑1 GTGAAAGTCGATAAAACAGATATTGCCGGTCACCGCGCTGGCAGCGGTTACGATGCGGTGGATATCGA < 1:15608061/68‑1 cctGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTAT < 1:34557207/65‑1 GGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATAT < 1:35375682/68‑1 GGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATAT < 1:36940617/68‑1 AGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCA > 1:12885944/1‑67 AGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCA > 1:6867495/1‑67 AGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCA > 1:911921/1‑67 AGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCA > 1:12490359/1‑67 AGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCA < 1:1242976/67‑1 AGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCA > 1:867325/1‑67 AGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCA < 1:9758212/67‑1 AGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCA < 1:21548644/67‑1 AGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCA > 1:36975288/1‑67 AGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCA < 1:367419/67‑1 AGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCA < 1:36440188/67‑1 AGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCA < 1:26926747/67‑1 AGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCA < 1:28472003/67‑1 AGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCA > 1:31411663/1‑67 GCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCAA > 1:11591232/1‑67 GCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCAA > 1:21412319/1‑67 GCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCAA > 1:16161610/1‑67 GCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCAA > 1:11517980/1‑67 GCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCAA > 1:30277406/1‑67 GCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACATCTATATCAA > 1:1872206/1‑67 GGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCAACCA > 1:29777072/1‑68 GGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCAACC < 1:19591042/67‑1 GGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCAAC < 1:12347989/66‑1 GGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCAAC < 1:16480933/66‑1 GGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCAAC < 1:1165692/66‑1 GGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCAAC < 1:6434056/66‑1 GGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCAAC < 1:27302663/66‑1 GGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCAA < 1:20866869/65‑1 CCACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/3215287‑3215213‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcagcggTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCAACCA > CP009273/3215274‑3215339 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |