| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 3215213 = | 264 (0.590) | 29 (0.080) | 10/96 | NT | 10.9% | coding (389/984 nt) | ebgR | transcriptional repressor |
| ? | CP009273 | 3215274 = | 250 (0.660) | coding (450/984 nt) | ebgR | transcriptional repressor | |||||
Only 100 of 436 total aligned reads displayed.
TGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCAACCA > CP009273/3215207‑3215339 | tcgtaaccgctgccgggttcgtgaaagtcgataaaacagatattgtcggtcaacgcgctggcagcggt < 1:2386023‑M2/1‑1 (MQ=255)tcgtaaccgctgccgggttcgtgaaagtcgataaaacagatattgtcggtcaacgcgctggcagcggt < 1:15588750‑M2/1‑1 (MQ=255)tcgtaaccgctgccgggttcgtgaaagtcgataaaacagatattgtcggtcaacgcgctggcagcggt < 1:13293113‑M2/1‑1 (MQ=255)tGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGAGTTTCACGAACCCGGCAGCGGt < 1:7292856/68‑1 (MQ=255)tGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGt > 1:34037079/1‑68 (MQ=255)tGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGt < 1:15938785/68‑1 (MQ=255) cgcgcCGCTGCCAGCGCGTTGCCCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGtt > 1:35816556/1‑67 (MQ=255) gcgcCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTAc > 1:13033958/1‑68 (MQ=255) aaccgcggccgggttcgggaaagtcgataaaacagaaattgtcggtcaacgcgctggccgcggTTAc < 1:15372789‑M2/4‑1 (MQ=255) CCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTTTCGCCTTTCACGAACCCGGCAGCGGTTACGAt < 1:5923944‑M1/68‑1 (MQ=255) CGCTGCCAGCGCGTTGCCCGACAATATCTGTTTTATCGACTTTCACGAACCGGGCAGCGGTTACGAt < 1:4234168‑M1/67‑1 (MQ=255) CGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGAt < 1:18110790‑M1/67‑1 (MQ=255) CGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGAt < 1:3732521‑M1/67‑1 (MQ=255) GCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGt > 1:20678443‑M1/1‑68 (MQ=255) cgggttcgtgaaagtcgataaaacagatattggcggtcaacgcgctcgcagcggTTACGATGCGGTgg < 1:8789935‑M2/14‑1 (MQ=255) CAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGAtgcggggg > 1:35578007‑M1/1‑65 (MQ=255) CAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTgg > 1:14215783‑M1/1‑68 (MQ=255) CAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTgg > 1:19749196‑M1/1‑68 (MQ=255) CAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTgg > 1:7960118‑M1/1‑68 (MQ=255) CAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTCACGATGCGGTgg > 1:24032147‑M1/1‑68 (MQ=255) cgcgTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGata > 1:12093130/1‑68 (MQ=255) gcgTTGACCGACAATATCTGTTTTATCGACTTTCACGACCCCGGCAGCGGTTACGATGCGGTGGat < 1:20734470/66‑1 (MQ=255) gcgTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGat < 1:19521295/66‑1 (MQ=255) cgTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATc > 1:22003720/1‑68 (MQ=255) tGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGAt < 1:9798614/68‑1 (MQ=255) tGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGAt < 1:17509068/68‑1 (MQ=255) tGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGAt < 1:16495661/68‑1 (MQ=255) aCCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGa > 1:14951047/1‑65 (MQ=255) cGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTgg < 1:32436949/68‑1 (MQ=255) gACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGc < 1:13907673/68‑1 (MQ=255) aCAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGc > 1:14781993/1‑67 (MQ=255) tatCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCa < 1:17777243/68‑1 (MQ=255) tatCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCa < 1:35317434/68‑1 (MQ=255) tatCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCa < 1:14370978/68‑1 (MQ=255) tatCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCa > 1:27954068/1‑68 (MQ=255) tatCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCa < 1:22955132/68‑1 (MQ=255) tCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATc > 1:4394104/1‑68 (MQ=255) tCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATc < 1:1055883/68‑1 (MQ=255) tCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATc > 1:10838956/1‑68 (MQ=255) cTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGGTCTGGCACGCATCa > 1:3641311/1‑68 (MQ=255) cTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCa > 1:31144609/1‑68 (MQ=255) tGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAg > 1:32968445/1‑68 (MQ=255) gTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCCCGCATCAGt < 1:34904002/68‑1 (MQ=255) gTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGt < 1:6832831/68‑1 (MQ=255) gTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGt < 1:11635647/68‑1 (MQ=255) gTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGt < 1:9413482/68‑1 (MQ=255) gTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGt < 1:9664984/68‑1 (MQ=255) gTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGt < 1:23744607/68‑1 (MQ=255) gTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGt < 1:22780464/68‑1 (MQ=255) gTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGt < 1:25212292/68‑1 (MQ=255) ttttATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTa > 1:7712023/1‑68 (MQ=255) ttttATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTa > 1:27581870/1‑68 (MQ=255) ttttATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTa > 1:24630054/1‑68 (MQ=255) ttttATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTa > 1:29813855/1‑68 (MQ=255) ttttATCGACTTTCACGAACCCCGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTa > 1:11224780/1‑68 (MQ=255) tttATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTaa < 1:20244474/68‑1 (MQ=255) aTCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGa > 1:21185584/1‑68 (MQ=255) tCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGaa < 1:11939573/68‑1 (MQ=255) cGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGaaa > 1:30516583/1‑68 (MQ=255) cGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGaaa > 1:26540943/1‑68 (MQ=255) cGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGaaa > 1:32122436/1‑68 (MQ=255) tttCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAatcat < 1:25792259/68‑1 (MQ=255) cGAGCCCGGCAGCGGTTAAGATGCGGTGGATATAGATCTGGCACGCATCAGTAAAGAAATCATCGACt < 1:34696043/68‑1 (MQ=255) cGAACCCGGGAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACt < 1:2540528/68‑1 (MQ=255) cGAACCCGGCAGCGGTTACGTTGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACt < 1:29491515/68‑1 (MQ=255) cGAACCCGGCAGCGGTTACGATTCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACt < 1:8382270/68‑1 (MQ=255) cGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACt < 1:23491160/68‑1 (MQ=255) cGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACt < 1:7870380/68‑1 (MQ=255) cGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACt < 1:6148819/68‑1 (MQ=255) cGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACt < 1:36706440/68‑1 (MQ=255) cGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACt < 1:6870125/68‑1 (MQ=255) cGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACt < 1:12208426/68‑1 (MQ=255) cGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACt < 1:5134176/68‑1 (MQ=255) cGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACt < 1:33473661/68‑1 (MQ=255) cGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACt < 1:4809792/68‑1 (MQ=255) cGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACt < 1:16102572/68‑1 (MQ=255) cGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACt > 1:8118079/1‑68 (MQ=255) cGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACt < 1:18954897/68‑1 (MQ=255) cGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACt < 1:24485326/68‑1 (MQ=255) cGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACt < 1:30834537/68‑1 (MQ=255) cGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACt < 1:302431/68‑1 (MQ=255) cGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACt < 1:29313347/68‑1 (MQ=255) cGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACt < 1:27057292/68‑1 (MQ=255) cGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACt < 1:26116992/68‑1 (MQ=255) gAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACtt < 1:2155855/68‑1 (MQ=255) gAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACtt < 1:24916246/68‑1 (MQ=255) aCCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCt > 1:10225584/1‑68 (MQ=255) aCCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCt > 1:15157634/1‑68 (MQ=255) cccGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCta > 1:22428831/1‑68 (MQ=255) cccGGCAGCGGTTACGATGCGGTGGATATCGAGCTGGCACGCATCAGTAAAGAAATCATCGACTTCta < 1:36219935/68‑1 (MQ=255) cctgcagcggTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCtat < 1:34557207‑M2/58‑1 (MQ=255) ccGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCtat < 1:5632225/68‑1 (MQ=255) ccGGCAGCGGTTAAGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCtat < 1:27214907/68‑1 (MQ=255) agcggTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCa > 1:12885944‑M2/6‑67 (MQ=255) agcggTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCa > 1:31411663‑M2/6‑67 (MQ=255) agcggTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCa > 1:911921‑M2/6‑67 (MQ=255) agcggTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCa < 1:28472003‑M2/62‑1 (MQ=255) gcggTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCaa > 1:11517980‑M2/5‑67 (MQ=255) gcggTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACATCTATATCaa > 1:1872206‑M2/5‑67 (MQ=255) ggTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCAAc < 1:6434056‑M2/64‑1 (MQ=255) | TGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCAACCA > CP009273/3215207‑3215339 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |