| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 3333655 | 353 (0.790) | 21 (0.060) | 13/94 | NT | 6.3% | coding (22/978 nt) | yrbG | putative calcium/sodium:proton antiporter |
| ? | CP009273 | = 3333682 | 327 (0.880) | coding (49/978 nt) | yrbG | putative calcium/sodium:proton antiporter | |||||
Only 100 of 232 total aligned reads displayed.
GCTTTCTGAAAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACTGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/3333580‑3333655‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcactgtAAACGACCAAAAGTAAACCAACAATTAACAGTGCCGTAGCTAAAAGCATCTAACGTCCTTTCTTCA < CP009273/3333682‑3333617 GCTTTCTGAAAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTAC > 1:9401078/1‑68GCTTTCTGAAAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTAC > 1:21062444/1‑68GCTTTCTGAAAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTAC > 1:14607251/1‑68GCTTTCTGAAAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTAC > 1:29302300/1‑68GCTTTCTGAAAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTAC > 1:12918267/1‑68GCTTTCTGAAAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTAC > 1:32309459/1‑68GCTTTCTGAAAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTAC > 1:35429013/1‑68GCTTTCTGAAAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTAC > 1:6029832/1‑68GCTTTCTGAAAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTAC > 1:10606127/1‑68GCTTTCTGAAAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTAC > 1:861942/1‑68GCTTTCTGAAAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTAC > 1:4021335/1‑68GCTTACTGAAAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTAC > 1:15951311/1‑68 CTTTCTGAAAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACG > 1:29033056/1‑68 CTTTCTGAAAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGGTAGATGCTTTTAGCTAC < 1:20597382/67‑1 TTTCTGAAAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACG < 1:19570096/67‑1 TTCTGAAAATCTTCAGTGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGC < 1:2480761/68‑1 TTCTGAAAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGC < 1:23943515/68‑1 TTCTGAAAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGC < 1:17407683/68‑1 TTCTGAAAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGC < 1:16305065/68‑1 TTCTGAAAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGC < 1:19592076/68‑1 TTCTGAAAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGC < 1:19742048/68‑1 TTCTGAAAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGC < 1:20211810/68‑1 TTCTGAAAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGC < 1:7761805/68‑1 TTCTGAAAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGC < 1:32076403/68‑1 TTCTGAAAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGC < 1:331922/68‑1 TTCTGAAAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGC < 1:4680295/68‑1 TGAAAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACT < 1:260442/68‑1 TGAAAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACT < 1:17143198/68‑1 TGAAAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGC > 1:36838573/1‑65 GAAAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACTG < 1:35488764/68‑1 GAAAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACTG < 1:14118974/68‑1 GAAAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACTG < 1:14689987/68‑1 GAAAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACTG < 1:31570827/68‑1 GAAAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACTG < 1:23587000/68‑1 GAAAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACTG < 1:33288663/68‑1 GAAAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACTG < 1:22599558/68‑1 GAAAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACTG < 1:5173690/68‑1 GAAAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACTG < 1:16173326/68‑1 GAAAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACTG < 1:7329528/68‑1 GAAAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGC > 1:10359516/1‑64 GAAAATCTTAAGCGGACCGGCGTGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACTG < 1:10724927/68‑1 AAAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACTGT < 1:30630244/68‑1 AAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACTGT < 1:3629355/67‑1 AAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACTGT < 1:10101814/67‑1 AAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACTGT < 1:33602234/67‑1 AAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACTGT < 1:10670612/67‑1 AAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACTGT < 1:12239353/67‑1 AAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACTGT < 1:8152127/67‑1 AAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACTGT < 1:30113362/67‑1 AAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACTGT < 1:9265790/67‑1 AAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACTGT < 1:28697555/67‑1 AAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACTGT < 1:18322762/67‑1 AAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACTGT < 1:16622338/67‑1 AAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACTGT < 1:15141933/67‑1 AAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACTGT < 1:22841755/67‑1 AAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACTGT < 1:23739978/67‑1 AAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACTGT < 1:24993217/67‑1 ATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACTGTAAACGACCAAAAGTAACCCAACAA > 1:29607962/1‑68 TGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACTGTAAACGACCAAAAGTAAACCAACAATTAAC > 1:26993341/1‑68 TGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACTGTAAACGACCAAAAGTAAACCAACAATTAAC > 1:34486042/1‑68 AAGAAAGGACGTTAGATGCTTTTAGCTACGGCACTG < 1:1005767/36‑1 ACGTTAGATGCTTTTAGCTACGGCACTGTAAACGACCAAAAGTAAACCAACAATTAACAGTGCCGTA > 1:17353448/1‑67 TGCTTTTAGCTACGGCACTGTAAACGACCGAAAGTAAACCAAGAATTAACAGTGCCGTAGCTAAAAGC > 1:36058627/1‑68 GCTTTTAGCTACGGCACTGTAAACGACCAAAAGTAAACCAACAATTAACAGTGCCGTAGCTAAAAGCA > 1:6261799/1‑68 CTTTTAGCTACGGCACTGTAAACGACCAAAAGTAAACCATCAATTAACAGTGCCGTAGCTAAAAGCA > 1:2099777/1‑67 CTTTTAGCTACGGCACTGTAAACGACCAAAAGTAAACCAACAATTAACAGTGCCGTAGCTAAAAGCA > 1:35314291/1‑67 CTTTTAGCTACGGCACTGTAAACGACCAAAAGTAAACCAACAATTAACAGTGCCGTAGCTAAAAGCA > 1:35084969/1‑67 GCTACGGCACTGTAAACGACCAAAAGTAAACCAACAATTAACAGTGCCGTAGCTAAAAGCATCTAACG > 1:21551324/1‑68 CGGCACTGTAAACGACCAAAAGTAAACCAACAATTAACAGTGCCGTAGCTAAAAGCATCTAACGTCC < 1:15826379/67‑1 CGGCACTGTAAACGACCAAAAGTAAACCAACAATTAACAGTGCCGTAGCTAAAAGCATCTAACGTCC < 1:5543834/67‑1 CGGCACTGTAAACGACCAAAAGTAAACCAACAATTAACAGTGCCGTAGCTAAAAGCATCTAACGTCC < 1:3958828/67‑1 CGGCACTGTAAACGACCAAAAGTAAACCAACAATTAACAGTGCCGTAGCTAAAAGCATCTAACGTCC < 1:36158131/67‑1 CGGCACTGTAAACGACCAAAAGTAAACCAACAATTAACAGTGCCGTAGCTAAAAGCATCTAACGTCC < 1:28577704/67‑1 CGGCACTGTAAACGACCAAAAGTAAACCAACAATTAACAGTGCCGTAGCTAAAAGCATCTAACGTCC < 1:11313903/67‑1 CGGCACTGTAAACGACCAAAAGTAAACCAACAATTAACAGTGCCGTAGCTAAAAGCATCTAACGTCC < 1:18443431/67‑1 CGGCACTGTAAACGACCAAAAGTAAACCAACAATTAACAGTGCCGTAGCTAAAAGCATCTAACGTCC < 1:25537664/67‑1 CGGCACTGTAAACGACCAAAAGTAAACCAACAATTAACAGTGCCGTAGCTAAAAGCATCTAACGTCC < 1:11560179/67‑1 CGGCACTGTAAACGACCAAAAGTAAACCAACAATTAACAGTGCCGTAGCTAAAAGCATCTAACGTCC < 1:10188302/67‑1 CGGCACTGTAAACGACCAAAAGTAAACCAACAATTAACAGTGCCGTAGCTAAAAGCATCTAACGTCC < 1:17713886/67‑1 GCACTGTAAACGACCAAAAGTAAACCAACAATTAACAGTGCCGTAGCTAAAAGCATCTAACGTCCTT > 1:2300783/1‑67 GCACTGTAAACGACCAAAAGTAAACCAACAATTAACAGTGCCGTAGCTAAAAGCATCTAACGTCCTT > 1:1100906/1‑67 CACTGTAAACGACCAAAAGTAAACCAACAATTAACAGTGCCGTAGCTAAAAGCATCTAACGTCCTTT < 1:26643140/67‑1 CACTGTAAACGACCAAAAGTAAACCAACAATTAACAGTGCCGTAGCTAAAAGCATCTAACGTCCTTT < 1:28068619/67‑1 CACTGTAAACGACCAAAAGTAAACCAACAATTAACAGTGCCGTAGCTAAAAGCATCTAACGTCCTTT < 1:30918047/67‑1 CACTGTAAACGACCAAAAGTAAACCAACAATTAACAGTGCCGTAGCTAAAAGCATCTAACGTCCTTT < 1:14965178/67‑1 CACTGTAAACGACCAAAAGTAAACCAACAATTAACAGTGCCGTAGCTAAAAGCATCTAACGTCCTTT < 1:29665696/67‑1 CACTGTAAACGACCAAAAGTAAACCAACAATTAACAGTGCCGTAGCTAAAAGCATCTAACGTCCTT > 1:30545219/1‑66 ACTGTAAACGACCAAAAGTAAACCAACAATTAACAGTGCCGTTGCTAAAAGCATCTAACGTCCTTTCT < 1:27431546/68‑1 ACTGTAAACGACCAAAAGTAAACCAACAATTAACAGTGCCGTAGCTAAAAGCATCTAACGTCCTTTCT < 1:4947666/68‑1 ACTGTAAACGACCAAAAGTAAACCAACAATTAACAGTGCCGTAGCTAAAAGCATCTAACGTCCTTTCT < 1:20527190/68‑1 ACTGTAAACGACCAAAAGTAAACCAACAATTAACAGTGCCGTAGCTAAAAGCATCTAACGTCCTTTCT < 1:16194210/68‑1 ACTGTAAACGACCAAAAGTAAACCAACAATTAACAGTGCCGTAGCTAAAAGCATCTAACGTCCTTTCT < 1:15234782/68‑1 ACTGTAAACGACCAAAAGTAAACCAACAATTAACAGTGCCGTAGCTAAAAGCATCTAACGTCCTTTCT < 1:640544/68‑1 ACTGTAAACGACCAAAAGTAAACCAACAATTAACAGTGCCGTAGCTAAAAGCATCTAACGTCCTTTCT < 1:36355665/68‑1 ACTGTAAACGACCAAAAGTAAACCAACAATTAACAGTGCCGTAGCTAAAAGCATCTAACGTCCTTTCT < 1:836780/68‑1 ACTGTAAACGACCAAAAGTAAACCAACAATTAACAGTGCCGTAGCTAAAAGCATCTAACGTCCTTTCT > 1:11896811/1‑68 GTAAACGACCAAAAGTAAACCAACAATTAACAGTGCCGTAGCTAAAAGCATCTAACGTCCTTTCTTCA < 1:6089984/68‑1 GTAAACGACCAAAAGTAAACCAACAATTAACAGTGCCGTAGCTAAAAGCATCTAACGTCCTTTCTTCA > 1:28825057/1‑68 GTAAACGACCAAAAGTAAACCAACAATTAACAGTGCCGTAGCTAAAAGCATCTAACGTCCTTTCTTCA < 1:33101539/68‑1 GTAAACGACCAAAAGTAAACCAACAATTAACAGTGCCGTAGCTAAAAGCATCTAACGTCCTTTCTTCA < 1:13932575/68‑1 GCTTTCTGAAAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACTGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/3333580‑3333655‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcactgtAAACGACCAAAAGTAAACCAACAATTAACAGTGCCGTAGCTAAAAGCATCTAACGTCCTTTCTTCA < CP009273/3333682‑3333617 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |