| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 2161385 | 371 (0.830) | 21 (0.060) | 8/90 | NT | 6.7% | intergenic (‑90/+85) | yegZ/yegR | pseudogene, gpD phage P2‑like protein D/uncharacterized protein |
| ? | CP009273 | = 2161396 | 287 (0.800) | intergenic (‑101/+74) | yegZ/yegR | pseudogene, gpD phage P2‑like protein D/uncharacterized protein | |||||
Only 100 of 816 total aligned reads displayed.
AAGCCCTATCTCTGGTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACGCGCATATTTGACG > CP009273/2161318‑2161452 | gCCCTATCTCTGGTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCtt > 1:8500561/1‑68 (MQ=255) cccTATCTCTGGTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCtt > 1:9775858/1‑67 (MQ=255) cccTATCTCTGGTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCtt > 1:5389219/1‑67 (MQ=255) cccTATCTCTGGTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCtt > 1:4429667/1‑67 (MQ=255) ccTATCTCTGGTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCtt < 1:19752180/66‑1 (MQ=255) ccTATCTCTGGTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTc > 1:3252182/1‑68 (MQ=255) ccTATCTCTGGTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTc > 1:13138347/1‑68 (MQ=255) ccTATCTCTGGTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTc > 1:22829281/1‑68 (MQ=255) aTCTCTGGTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACt < 1:24451137/68‑1 (MQ=255) tctcTGGTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACtt > 1:7112261/1‑68 (MQ=255) ctctGGTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTa > 1:13597473/1‑68 (MQ=255) ctctGGTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTa > 1:26701792/1‑68 (MQ=255) ctctGGTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTa > 1:14038524/1‑68 (MQ=255) ctctGGTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTa > 1:17541028/1‑68 (MQ=255) ctctGGTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTa > 1:4857382/1‑68 (MQ=255) ctctGGTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGAAGCCTTTCACTTa > 1:34958121/1‑68 (MQ=255) tctGGTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTa > 1:1915771/1‑67 (MQ=255) tctGGTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTa > 1:3852728/1‑67 (MQ=255) ggTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCg < 1:17835961‑M2/67‑2 (MQ=255) gTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCggc < 1:21659233‑M2/68‑4 (MQ=255) tAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCggca < 1:35296075‑M2/68‑5 (MQ=255) aCCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCggcatc < 1:12889629‑M2/68‑7 (MQ=255) ccGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCggcatcg < 1:12524956‑M2/68‑8 (MQ=255) cGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCggcatcgt > 1:14459842‑M2/1‑60 (MQ=255) cGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCggcatcgt > 1:1804568‑M2/1‑60 (MQ=255) gTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCggcatcgtg > 1:29415517‑M2/1‑59 (MQ=255) gTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCggcatcgt < 1:37019180‑M2/67‑9 (MQ=255) cTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCggcatcgtgct > 1:6065965‑M2/1‑57 (MQ=255) ttCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCggcatcgtgct > 1:12068832‑M2/1‑56 (MQ=255) ttCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTc < 1:11289624/68‑1 (MQ=255) tCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTcc < 1:26855140/68‑1 (MQ=255) tCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTcc < 1:25521918/68‑1 (MQ=255) tCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTcc < 1:33039268/68‑1 (MQ=255) cATTGACCACATCGATATAATCCTCCTTCATAGCACGATGCCTTTCACTTATCggcatcgtgctatga > 1:22031548‑M2/1‑53 (MQ=255) cATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCca < 1:8924141/68‑1 (MQ=255) aTTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCcac > 1:30161109/1‑68 (MQ=255) aTTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCcac > 1:2514618/1‑68 (MQ=255) gACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAgg < 1:28896630/68‑1 (MQ=255) gACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAgg < 1:16619043/68‑1 (MQ=255) aCCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGt > 1:7585603/1‑68 (MQ=255) aCCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGt > 1:3057697/1‑68 (MQ=255) ccACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCCCTTATCggcatcgtgctatgaaggagg > 1:6430019‑M2/1‑47 (MQ=255) ccACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCggcatcgtgctatgaaggagg > 1:25790594‑M2/1‑47 (MQ=255) ccACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCggcatcgtgctatgaaggagg > 1:1873887‑M2/1‑47 (MQ=255) ccACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGt > 1:18317324/1‑67 (MQ=255) ccACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGt > 1:9082034/1‑67 (MQ=255) ccACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGt > 1:27755492/1‑67 (MQ=255) caTCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCg < 1:9400943/68‑1 (MQ=255) caTCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCg < 1:28350840/68‑1 (MQ=255) tCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCg > 1:16355541/1‑66 (MQ=255) tCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGc < 1:31594172/68‑1 (MQ=255) tCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGc < 1:36176626/68‑1 (MQ=255) tCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGc < 1:35639815/68‑1 (MQ=255) tCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGc < 1:819548/68‑1 (MQ=255) gATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCt > 1:29767782/1‑67 (MQ=255) tAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACg < 1:17308799/68‑1 (MQ=255) aGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGc > 1:24056919/1‑68 (MQ=255) aGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGc > 1:11127181/1‑68 (MQ=255) aGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGc > 1:22443613/1‑68 (MQ=255) aGAATCCTCCTTAATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGTCTACGc > 1:21429321/1‑68 (MQ=255) aTCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGcaca < 1:4002561/68‑1 (MQ=255) aTCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGca < 1:31331867/66‑1 (MQ=255) cctcctTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAg > 1:19328188/1‑67 (MQ=255) cctcctTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGc < 1:23491524/68‑1 (MQ=255) cctTCATAGCACGATGCCTTTCCCTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAg > 1:28673443/1‑68 (MQ=255) cctTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAg > 1:15585420/1‑68 (MQ=255) ctTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGa < 1:20275998/68‑1 (MQ=255) ttCATAGCACGATGCCgataagtgaaaggcatcgtgctatgaaggaggattctatcgatgtggtcaat > 1:5739158‑M1/1‑16 (MQ=255) ttCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGaa < 1:34466945/68‑1 (MQ=255) ttCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGa > 1:11752763/1‑67 (MQ=255) aTAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAAcgc < 1:6792207/68‑1 (MQ=255) aTAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAAcgc > 1:36616435/1‑68 (MQ=255) aGCACGATGCCgataagtgaaaggcatcgtgctatgaaggaggattctatcgatgtggtcaatggaag > 1:13800562‑M1/1‑11 (MQ=255) AGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACgcgc < 1:14323892‑M1/68‑1 (MQ=255) cACGATGCCgataagtgaaaggcatcgtgctatgaaggaggattctatcgatgtggtcaatggaagac > 1:24822922‑M1/1‑9 (MQ=255) CACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACGCGCat < 1:33504870‑M1/68‑1 (MQ=255) CACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACGCGCat < 1:23785229‑M1/68‑1 (MQ=255) aCGATGCCgataagtgaaaggcatcgtgctatgaaggaggattctatcgatgtggtcaatggaagacg > 1:15390824‑M1/1‑8 (MQ=255) aCGATGCCgataagtgaaaggcatcgtgctatgaaggaggattctatcgatgtggtcaatggaagacg > 1:14566374‑M1/1‑8 (MQ=255) aCGATGCCgataagtgaaaggcatcgtgctatgaaggaggattctatcgatgtggtcaatggaagacg > 1:10921176‑M1/1‑8 (MQ=255) aCGATGCCgataagtgaaaggcatcgtgctatgaaggaggattctatcgatgtggtcaatggaagac < 1:7917401‑M1/67‑60 (MQ=255) ACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCTGGCTACGCACAGCCAGAACGCGCata < 1:31969768‑M1/68‑1 (MQ=255) ACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCTGCTACGCACAGCCAGAACGCGCata > 1:21204232‑M1/1‑68 (MQ=255) ACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACGCGCata < 1:26517201‑M1/68‑1 (MQ=255) ACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACGCGCata < 1:34640729‑M1/68‑1 (MQ=255) ACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACGCGCata < 1:33925276‑M1/68‑1 (MQ=255) ACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACGCGCata < 1:31018066‑M1/68‑1 (MQ=255) ACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACGCGCata > 1:10002483‑M1/1‑68 (MQ=255) ACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACGCGCata > 1:23145154‑M1/1‑68 (MQ=255) ACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACGCGCata < 1:20711163‑M1/68‑1 (MQ=255) ACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACGCGCata < 1:15007388‑M1/68‑1 (MQ=255) cGATGCCgataagtgaaaggcatcgtgctatgaaggaggattctatcgatgtggtcaatggaagacgg < 1:25340603‑M1/68‑62 (MQ=255) CGATGCCTTTTACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACGCGCatat > 1:28083482‑M1/1‑68 (MQ=255) CGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGGACAGCCAGAACGCGCatat > 1:26021722‑M1/1‑68 (MQ=255) CGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACGCGCatat > 1:27309585‑M1/1‑68 (MQ=255) CGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACGCGCatat > 1:2709446‑M1/1‑68 (MQ=255) gATGCCgataagtgaaaggcatcgtgctatgaaggaggattctatcgatgtggtcaatggaagacggt < 1:10543690‑M1/68‑63 (MQ=255) gCCgataagtgaaaggcatcgtgctatgaaggaggattctatcgatgtggtcaatggaagacggttac < 1:36825048‑M1/68‑66 (MQ=255) cTTCCACTTCTCgccaccgggctatgaaggaggattctatcgatgtggtcaatggaagacggttacca > 1:16082719‑M2/1‑12 (MQ=255) CTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACGCGCATATTTGAc > 1:29495968‑M1/1‑67 (MQ=255) | AAGCCCTATCTCTGGTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACGCGCATATTTGACG > CP009273/2161318‑2161452 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |