| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 2161385 | 371 (0.830) | 21 (0.060) | 8/90 | NT | 6.7% | intergenic (‑90/+85) | yegZ/yegR | pseudogene, gpD phage P2‑like protein D/uncharacterized protein |
| ? | CP009273 | = 2161396 | 287 (0.800) | intergenic (‑101/+74) | yegZ/yegR | pseudogene, gpD phage P2‑like protein D/uncharacterized protein | |||||
Only 100 of 619 total aligned reads displayed.
CTGGTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACGCGCATATTTGACGCTTACCAAAAA > CP009273/2161329‑2161463 | ctGGTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATc < 1:33204444/68‑1 (MQ=255) ggTAACCGTCTCCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCg < 1:14989060‑M2/67‑2 (MQ=255) gTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCggc < 1:21659233‑M2/68‑4 (MQ=255) tAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCggc > 1:32238564‑M2/1‑64 (MQ=255) aaCCGTCTTCCATTGACCACATCGATAGCATCCTCCTTCATAGCACGATGCCTTTCACTTATCggca < 1:14564115‑M2/67‑5 (MQ=255) aaCCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCggca < 1:28464886‑M2/67‑5 (MQ=255) aaCCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCggca < 1:8677745‑M2/67‑5 (MQ=255) ccGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCggcatcg < 1:16316183‑M2/68‑8 (MQ=255) ccGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCggcatcg < 1:13192390‑M2/68‑8 (MQ=255) ccGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCggcatcg < 1:25340603‑M2/68‑8 (MQ=255) cGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCggcatcgt > 1:8936718‑M2/1‑60 (MQ=255) cGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCggcatcgt > 1:10921176‑M2/1‑60 (MQ=255) cGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCggcatcgt > 1:18617562‑M2/1‑60 (MQ=255) gTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCggcatcgt < 1:14441981‑M2/67‑9 (MQ=255) cTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCCCGATGCCTTTCACTTATCggcatcgtgct > 1:23773894‑M2/1‑57 (MQ=255) tCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCggcatcgtgctat > 1:28209132‑M2/1‑55 (MQ=255) tCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTcc < 1:9488156/68‑1 (MQ=255) tCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTcc < 1:25521918/68‑1 (MQ=255) cATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCca < 1:9793760/68‑1 (MQ=255) aTTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCcac > 1:2514618/1‑68 (MQ=255) aCCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGt > 1:23935216/1‑68 (MQ=255) aCCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGt > 1:22595143/1‑68 (MQ=255) aCCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGt > 1:22290415/1‑68 (MQ=255) ccACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCggcatcgtgctatgaaggagg > 1:25790594‑M2/1‑47 (MQ=255) ccACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCggcatcgtgctatgaaggagg > 1:15345246‑M2/1‑47 (MQ=255) ccACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCggcatcgtgctatgaaggagg > 1:30761055‑M2/1‑47 (MQ=255) ccACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCCCAGGt > 1:6534543/1‑67 (MQ=255) ccACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGtt < 1:5293753/68‑1 (MQ=255) ccACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGtt < 1:12143068/68‑1 (MQ=255) ccACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGt > 1:14243435/1‑67 (MQ=255) ccACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGt > 1:17913963/1‑67 (MQ=255) ccACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGt > 1:17753688/1‑67 (MQ=255) ccACATCGATAGAATCCTACTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGt > 1:28745546/1‑67 (MQ=255) acaTCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCggcatcgtgctatgaaggaggat > 1:19594676‑M2/1‑45 (MQ=255) caTCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCg < 1:18224989/68‑1 (MQ=255) caTCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCg < 1:34376937/68‑1 (MQ=255) tCGATATAATCCTCCTTCATAGCACGATGCCTTTCACTTATCggcatcgtgctatgaaggaggattct > 1:16521753‑M2/1‑42 (MQ=255) tCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCggcatcgtgctatgaaggaggattct > 1:7550346‑M2/1‑42 (MQ=255) tCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGGTCCCACAGGTTCCGGc < 1:29425765/68‑1 (MQ=255) tCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCg > 1:16080807/1‑66 (MQ=255) tCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGc < 1:31559278/68‑1 (MQ=255) tCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGc < 1:918293/68‑1 (MQ=255) tCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGc < 1:35639815/68‑1 (MQ=255) tCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGc < 1:819548/68‑1 (MQ=255) tCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGc < 1:19241651/68‑1 (MQ=255) tAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTAc < 1:4716159/67‑1 (MQ=255) tAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACg < 1:22947407/68‑1 (MQ=255) tAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACg < 1:27350243/68‑1 (MQ=255) aGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGc > 1:21236590/1‑68 (MQ=255) aGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGc > 1:30167457/1‑68 (MQ=255) aGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGc > 1:11127181/1‑68 (MQ=255) aGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGc > 1:700053/1‑68 (MQ=255) aGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGc > 1:21079959/1‑68 (MQ=255) aGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGc > 1:4075351/1‑68 (MQ=255) aGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGc > 1:3868966/1‑68 (MQ=255) aGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGc > 1:373655/1‑68 (MQ=255) aTCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGcaca < 1:32825637/68‑1 (MQ=255) aTCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGcaca > 1:3688553/1‑68 (MQ=255) aTCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGcaca < 1:13858836/68‑1 (MQ=255) aTCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGcaca < 1:36244288/68‑1 (MQ=255) aTCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGca < 1:31331867/66‑1 (MQ=255) cctcctTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAg > 1:26545615/1‑67 (MQ=255) cctcctTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAg > 1:6049134/1‑67 (MQ=255) cctcctTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAg > 1:12443726/1‑67 (MQ=255) cctcctTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGc < 1:11298683/68‑1 (MQ=255) cctgtgggAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCa < 1:2990422‑M1/60‑1 (MQ=255) cctTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAg > 1:15585420/1‑68 (MQ=255) ttCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGa > 1:11752763/1‑67 (MQ=255) tCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAAc > 1:5629147/1‑68 (MQ=255) cATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCCCAGCCAGAAc > 1:26805464/1‑67 (MQ=255) cATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAAc > 1:27557037/1‑67 (MQ=255) cATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAAc > 1:20156919/1‑67 (MQ=255) aTAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAAcgc > 1:36616435/1‑68 (MQ=255) aTAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAAcgc > 1:26360824/1‑68 (MQ=255) tAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAAcgcg < 1:27883294/68‑1 (MQ=255) AGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACgcgc < 1:7824120‑M1/68‑1 (MQ=255) AGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACgcgc < 1:23375836‑M1/68‑1 (MQ=255) CACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACGCGCat < 1:28901234‑M1/68‑1 (MQ=255) CACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACGCGCat < 1:31051522‑M1/68‑1 (MQ=255) accaTGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACGCGCata > 1:2411776/4‑68 (MQ=255) ACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACGCGCata < 1:34957589‑M1/68‑1 (MQ=255) ACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACGCGCata < 1:34640729‑M1/68‑1 (MQ=255) ACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACGCGCata > 1:10002483‑M1/1‑68 (MQ=255) ACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACGCGCata < 1:21917180‑M1/68‑1 (MQ=255) ACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACGCGCata < 1:33925276‑M1/68‑1 (MQ=255) ACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACGCGCata < 1:33604822‑M1/68‑1 (MQ=255) CGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGGACAGCCAGAACGCGCatat > 1:26021722‑M1/1‑68 (MQ=255) CGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACGCGCatat > 1:35317084‑M1/1‑68 (MQ=255) CGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACGCGCatat > 1:2709446‑M1/1‑68 (MQ=255) GCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACGCGCATATTTg < 1:24771044‑M1/67‑1 (MQ=255) CCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACGCGCATATTTGAc < 1:31862849‑M1/68‑1 (MQ=255) CTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACGCGCATATTTGAc > 1:29495968‑M1/1‑67 (MQ=255) aCTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACGCGCATATTTGCCGCTTa > 1:6303544/1‑67 (MQ=255) aCTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACGCGCATATTTGACGCTTa > 1:1717113/1‑67 (MQ=255) cTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACGCGCATATTTGACGCTTAcc > 1:130309/1‑68 (MQ=255) cTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACGCGCATATTTGACGCTTAcc < 1:20377348/68‑1 (MQ=255) tATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACGCGCATATTTGACGCTTACCaa > 1:13651329/1‑68 (MQ=255) tCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACGCGCATATTTGACGCTTACCaaaa < 1:18859904/68‑1 (MQ=255) tCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACGCGCATATTTGACGCTTACCaaaa > 1:10585550/1‑68 (MQ=255) cGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACGCGCATATTTGACGCTTACCaaaaa > 1:1281649/1‑68 (MQ=255) | CTGGTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACGCGCATATTTGACGCTTACCAAAAA > CP009273/2161329‑2161463 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |