| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 2499292 | 379 (0.850) | 22 (0.060) | 12/98 | NT | 5.6% | coding (820/1086 nt) | ypdF | Xaa‑Pro aminopeptidase |
| ? | CP009273 | = 2499321 | 410 (1.050) | coding (791/1086 nt) | ypdF | Xaa‑Pro aminopeptidase | |||||
Only 100 of 642 total aligned reads displayed.
TGCCGATAGCGTGACCGGTGTTATGACCGAAATAGTCGCCATAACCTGCTTCTGTAATGACCCGGCGCGCGGCATCGTCAACCTGCTGGCAGCGCACGCCGGGGCGAATCGCGGAGATTGCTGCGAGCTGTGC > CP009273/2499226‑2499358 | tGCCGATAGCGTGACCGGTGTTATGACCGAAATAGTCGCCATAACCTGCTTCTGTAATGACCCGgcgc < 1:30257582/68‑1 (MQ=255)tGCCGATAGCGTGACCGGTGTTATGACCGAAATAGTCGCCATAACCTGCTTCTGTAATGACCCGgcgc < 1:3409336/68‑1 (MQ=255) gCCGATAGCGTGACCGGTGTTATGACCGAAATAGTCGCCATAACCTGCTTCTGTAATGACCCGgcgc > 1:8813078/1‑67 (MQ=255) gCCGATAGCGTGACCGGTGTTATGACCGAAATAGTCGCCATAACCTGCTTCTGTAATGACCCGgcgc > 1:29554291/1‑67 (MQ=255) gCCGATAGCGTGACCGGTGTTATGACCGAAATAGTCGCCATAACCTGCTTCTGTAATGACCCGgcgc > 1:16220696/1‑67 (MQ=255) gCCGATAGCGTGACCGGTGTTATGACCGAAATAGTCGCCATAACCTGCTTCTGTAATGACCCGgcgc > 1:35741377/1‑67 (MQ=255) gCCGATAGCGTGACCGGTGTTATGACCGAAATAGTCGCCATAACCTGCTTCTGTAATGACCCGgcgc > 1:33461198/1‑67 (MQ=255) cGATAGCGTGACCGGTGTTATGACCGAAATAGTCGCCATAACCTGCTTCTGTAATGACCCGGcgcgcg < 1:18675780/68‑1 (MQ=255) cGTGACCGGTGTTATGACCGAAATAGTCGCCATAACCTGCTTCTGTAATGACCCGGCGCGCGGCATCg > 1:9474047/1‑68 (MQ=255) cGTGACCGGTGTTATGACCGAAATAGTCGCCATAACCTGCTTCTGTAATGACCCGGCGCGCGGCATCg > 1:2311323/1‑68 (MQ=255) cGTGACCGGTGTTATGACCGAAATAGTCGCCATAACCTGCTTCTGTAATGACCCGGCGCGCGGCATCg > 1:18997241/1‑68 (MQ=255) cGTGACCGGTGTTATGACCGAAATAGTCGCCATAACCTGCTTCTGTAATGACCCGGCGCGCGGCATCg > 1:35812581/1‑68 (MQ=255) cGTGACCGGTGTTATGACCGAAATAGTCGCCATAACCTGCTTCTGTAATGACCCGGCGCGCGGCATCg > 1:32709597/1‑68 (MQ=255) gTGACCGGTGTTATGACCGAAATAGTCGCCATAACCTGCTTCTGTAATGACCCGGCGCGCGGCATc < 1:27408340/66‑1 (MQ=255) gTGACCGGTGTTATGACCGAAATAGTCGCCATAACCTGCTTCTGTAATGACCCGGCGCGCGGCATCg < 1:7823900/67‑1 (MQ=255) aCCGGTGTTATGACCGAAATAGTCGCCATAACCTGCTTCTGTAATGACCCGGCGCGCGGCATCGTCa > 1:32357279/1‑67 (MQ=255) aCCGGTGTAATGACCGAAATAGTCGCCATAACCTGCTTCTGTAATGACCACGCGCGCGGCATCGtga > 1:11807129/1‑65 (MQ=255) cGGTGTTATGACCGAAATAGTCGCCATAACCTGCTTCTGTAATGACCCGGCGCGCGGCATCGTCAAcc < 1:21353413/68‑1 (MQ=255) cGGTGTTATGACCGAAATAGTCGCCATAACCTGCTTCTGTAATGACCCGGCGCGCGGCATCGTCAAcc < 1:10578864/68‑1 (MQ=255) cGGTGTTATGACCGAAATAGTCGCCATAACCTGCTTCTGTAATGACCCGGCGCGCGGCATCGTCAAcc < 1:36947987/68‑1 (MQ=255) tgtTATGACCGAAATAGTCGCCATAACCTGCTTCTGTAATGACCCGGCGCGCGGCATCGTCAACct > 1:11234682/1‑66 (MQ=255) gtTATGACCGAAATAGTCGCCATAACCTGCTTCTGTAATGACCCGGCGggcgctgccaggaggttgac > 1:6885283‑M1/1‑48 (MQ=255) tATGACCGAAATAGTCGCCATAACCTGCTTCTGTAATGACCCGGCGCGCGGCATCGTCAACctgctg > 1:21611146/1‑67 (MQ=255) gACCGAAATAGTCGCCATAACCTGCTTCTGTAATGCCCCGGCGCGCGGCATCGTCAACCTGCTGGCa > 1:28016618/1‑67 (MQ=255) gACCGAAATAGTCGCCATAACCTGCTTCTGTAATGACCCGGCGCGCGGCATCGTCATCCTGCTGGCa > 1:2905360/1‑67 (MQ=255) gACCGAAATAGTCGCCATAACCTGCTTCTGTAATGACCCGGCGCGCGGCATCGTCAACCTGCTGGCa > 1:29333796/1‑67 (MQ=255) gACCGAAATAGTCGCCATAACCTGCTTCTGTAATGACCCGGCGCGCGGCATCGTCAACCTGCTGGCa > 1:2893372/1‑67 (MQ=255) gACCGAAATAGTCGCCATAACCTGCTTCTGTAATGACCCGGCGCGCGGCATCGTCAACCTGCTGGCa > 1:34674730/1‑67 (MQ=255) gACCGAAATAGTCGCCATAACCTGCTTCTGTAATGACCCGGCGCGCGGCATCGTCAACCTGCTGGCa > 1:6312439/1‑67 (MQ=255) gACCGAAATAGTCGCCATAACCTGCTTCTGTAATGACCCGGCGCGCGGCATCGTCAACCTGCTGGCa > 1:3803439/1‑67 (MQ=255) gACCGAAATAGTCGCCATAACCTGCTTCTGTAATGACCCGGCGCGCGGCATCGTCAACCTGCTGGCa > 1:30766174/1‑67 (MQ=255) gACCGAAATAGTCGCCATAACCTGCTTCTGTAATGACCCGGCGCGCGGCATCGTCAACCTGCTGGCa > 1:22789995/1‑67 (MQ=255) gACCGAAATAGTCGCCATAACCTGCTTCTGTAATGACCCGGCGCGCGGCATCGTCAACCTGCTGGCa > 1:21903884/1‑67 (MQ=255) gACCGAAATAGTCGCCATAACCTGCTTCTGTAATGACCCGGCGCGCGGCATCGTCAACCTGCTGGCa > 1:9820196/1‑67 (MQ=255) gACCGAAATAGTCGCCATAACCTGCTTCTGTAATGACCCGGCGCGCGGCATCGTCAACCTGCTGGCa > 1:15538057/1‑67 (MQ=255) gACCGAAATAGTCGCCATAACCTGCTTCTGTAATGACCCGGCGCGCGGCATCGTCAACCTGCTGGCa > 1:10884282/1‑67 (MQ=255) gACCGAAATAGTCGCCATAACCTGCTTCTGTAATGACCCGGCGCGCGGCATCGTCAACCTGCTGGCa > 1:15992917/1‑67 (MQ=255) ccGAAATAGTCGCCCTAACCTGCTTCTGTAATGACACGGCGCGCGGCATCGTCAACCTGCTGGCAgc > 1:27645920/1‑67 (MQ=255) ccGAAATAGTCGCCATAACCTGCTTCTGTAATGACCCGGCGCGCGGCATCGTCAACCTGCTGGCAgc > 1:15383439/1‑67 (MQ=255) aaTAGTCGCCATAACCTGCTTCTGTAATGACCCGGCGCGCGGCATCGTCAACCTGCTGGCAGCGCAcg > 1:1790895‑M2/1‑66 (MQ=255) aaTAGTCGCCATAACCTGCTTCTGTAATGACCCGGCGCGCGGCATCGTCAACCTGCTGGCAGCGCAcg > 1:35414538‑M2/1‑66 (MQ=255) cGCCATAACCTGCTTCTGTAATGACCCGGCGCGCGGCATCGTCAACCTGCTGGCAGCGCAcgccggg > 1:24274808‑M2/1‑60 (MQ=255) cGCCATAACCTGCTTCTGTAATGACCCGGCGCGCGGCATCGTCAACCTGCTGGCAGCGCAcgccggg > 1:25181685‑M2/1‑60 (MQ=255) cGCCATAACCTGCTTCTGTAATGACCCGGCGCGCGGCATCGTCAACCTGCTGGCAGCGCAcgccggg > 1:25479688‑M2/1‑60 (MQ=255) cGCCATAACCTGCTTCTGTAATGACCCGGCGCGCGGCATCGTCAACCTGCTGGCAGCGCAcgccggg > 1:12175936‑M2/1‑60 (MQ=255) cGCCATAACCTGCTTCTGTAATGACCCGGCGCGCGGCATCGTCAACCTGCTGGCAGCGCAcgccggg > 1:892663‑M2/1‑60 (MQ=255) cGCCATAACCTGCTTCTGTAATGACCCGGCGCGCGGCATCGTCAACCTGCTGGCAGCGCAcgccggg > 1:36433628‑M2/1‑60 (MQ=255) cGCCATAACCTGCTTCTGTAATGACCCGGCGCGCGGCATCGTCAACCTGCTGGCAGCGCAcgccgg > 1:19566270‑M2/1‑60 (MQ=255) ccATAACCTGCTTCTGTAATGACCCGGCGCGCGGCATCGTCAACCTGCTGGCAGCGCACGCCGGGGCg > 1:7605301/1‑68 (MQ=255) cATAACCTGCTTCTGTAATGACCCGGCGCGCGGCATCGTCAACCTGCTGGCAGCGCAcgccgggtca > 1:2993661‑M2/1‑57 (MQ=255) tacccTGCTTCTGTAATGACCCGGCGCGCGGCATCGTCAACCTGCTGGCAGCGCACGCCGGGGGGAAt < 1:8676965/65‑1 (MQ=255) tAACCTGCTTCTGTAATGACCCGGCGCGCGGCATCGTCAACCTGCTGGCAGCGCACGCCGGGGCGAAt < 1:24518634/68‑1 (MQ=255) ccTGCTTCTGTAATGACCCGGCGtgcgctgccagcaggttgacgatgccgcgcggcgggtcattacag > 1:27789093‑M1/1‑23 (MQ=255) ccTGCTTCTGTAATGACCCGGCGtgcgctgccagcaggttgacgatgccgcgcgccgggtcattacag > 1:25944008‑M1/1‑23 (MQ=255) ccTGCTTCTGTAATGACCCGGCGCGCGGCATCGTCAACCTGCTGGCAGCGCACGCCGGGGCGAATcgc > 1:14629417/1‑68 (MQ=255) ccTGCTTCTGTAATGACCCGGCGCGCGGCATCGTCAACCTGCTGGCAGCGCACGCCGGGGCGAATcgc > 1:15819753/1‑68 (MQ=255) cTGCTTCTGTAATGACCCGGCGCGCGGCATCGTCAACCTGCTGGCAGCGCACGCCGGGGCGAATcgcg > 1:562368/1‑68 (MQ=255) cTGCTTCTGTAATGACCCGGCGCGCGGCATCGTCAACCTGCTGGCAGCGCACGCCGGGGCGAATcgcg > 1:17545486/1‑68 (MQ=255) cTGCTTCTGTAATGACCCGGCGCGCGGCATCGTCAACCTGCTGGCAGCGCACGCCGGGGCGAATcgcg > 1:2838227/1‑68 (MQ=255) cTGCTTCTGTAATGACCCGGCGCGCGGCATCGTCAACCTGCTGGCAGCGCACGCCGGGGCGAATcgcg > 1:810809/1‑68 (MQ=255) tGCTTCTGTAATGACCCGGCGCGCGGCATCGTCAACCTGCTGGCAGCGCAcgccgggtcattacagaa > 1:22208386‑M2/1‑50 (MQ=255) gCTTCTGTAATGACCCGGCGCGCGGCATCGTCAACCTGCTGGCAGCGCACGCCGGGGCGAATCGCGga > 1:5849146/1‑68 (MQ=255) tCTGTAATGACCCGGCGCGCGGCATCGTCAACCTGCTGGCAGCGCAcgccgggtcattacagaagcag > 1:36276490‑M2/1‑46 (MQ=255) tCTGTAATGACCCGGCGCGCGGCATCGTCAACCTGCTGGCAGCGCACGCCGGGGCGAATCGCGGAGAt > 1:18376141/1‑68 (MQ=255) cTGTAATGACCCGGCGCGCGGCATCGTCAACCTGCTGGCAGCGCAcgccgggtcattacagaagcagg > 1:29791161‑M2/1‑45 (MQ=255) cTGTAATGACCCGGCGCGCGGCATCGTCAACCTGCTGGCAGCGCAcgccgggtcattacagaagcagg > 1:10194344‑M2/1‑45 (MQ=255) cTGTAATGACCCGGCGCGCGGCATCGTCAACCTGCTGGCAGCGCACGCCGGGGCGAATCGCGGAGAtt < 1:18804821/68‑1 (MQ=255) tAATGACCCGGCGtgcgctgccagcaggttgacgctgccgcgcgccgggtcattacagaagcaggtta > 1:20916930‑M1/1‑13 (MQ=255) tAATGACCCGGCGCGCGGCATCGTCAACCTGCTGGCAGCGCACGCCGGGGCGAATCGCGGAGAtt > 1:10005378/1‑65 (MQ=255) tAATGACCCGGCGCGCGGCATCGTCAACCTGCTGGCAGCGCACGCCGGGGCGAATCGCGGAGAtt > 1:1938029/1‑65 (MQ=255) aaTGACCCGGCGtgcgctgccagcaggttgacgatgccgcgcgccgggtcattacagaagcaggttat > 1:4625493‑M1/1‑12 (MQ=255) aaTGACCCGGCGCGCGGCATCGTCAACCTGCTGGCAGCGCACGCCGGGGCGAATCGCGGAGATtgct > 1:33905257/1‑67 (MQ=255) aaTGACCCGGCGCGCGGCATCGTCAACCTGCTGGCAGCGCACGCCGGGGCGAATCGCGGAGATtgct > 1:26195184/1‑67 (MQ=255) aaTGACCCGGCGCGCGGCATCGTCAACCTGCTGGCAGCGCACGCCGGGGCGAATCGCGGAGATtgct > 1:30187957/1‑67 (MQ=255) aaTGACCCGGCGCGCGGCATCGTCAACCTGCTGGCAGCGCACGCCGGGGCGAATCGCGGAGATtgct > 1:28745942/1‑67 (MQ=255) tGACCCGGCGCGCGGCATCGTCAACCTGCTGGCAGCGCACGCCGGGGCGAATCGCGGAGATTGCTGCg > 1:31521180/1‑68 (MQ=255) gACCCGGCGCGCGGCATCGTCAACCTGCTGGCAGCGCACGCCGGGGCGAATCGCGGAGATTGCTGCGa > 1:2009145/1‑68 (MQ=255) gACCCGGCGCGCGGCATCGTCAACCTGCTGGCAGCGCACGCCGGGGCGAATCGCGGAGATTGCTGCGa > 1:16554404/1‑68 (MQ=255) cccGGCGtgcgctgccagcaggttgacgatgccgcgcgccgggtcattacagaagcaggttatggcg > 1:21200872‑M1/1‑7 (MQ=255) cccGGCGtgcgctgccagcaggttgacgatgccgcgcgccgggtcattacagaagcaggttatggcg > 1:20484131‑M1/1‑7 (MQ=255) cccGGCGtgcgctgccagcaggttgacgatgccgcgcgccgggtcattacagaagcaggttatggcg > 1:23431574‑M1/1‑7 (MQ=255) cccGGCGtgcgctgccagcaggttgacgatgccgcgcgccgggtcattacagaagcaggttatggcg < 1:26890110‑M1/67‑61 (MQ=255) cccGGCGtgcgctgccagcaggttgacgatgccgcgcgccgggtcattacagaagcaggttatggcg < 1:7307491‑M1/67‑61 (MQ=255) cccGGCGtgcgctgccagcaggttgacgatgccgcgcgccgggtcattacagaagcaggttatggcg < 1:35196551‑M1/67‑61 (MQ=255) cccGGCGtgcgctgccagcaggttgacgatgccgcgcgccgggtcattacagaagcaggttatggcg > 1:16828656‑M1/1‑7 (MQ=255) cccGGCGtgcgctgccagcaggttgacgatgccgcgcgccgggtcattacagaagcaggttatggcg < 1:14164527‑M1/67‑61 (MQ=255) cccGGCGtgcgctgccagcaggttgacgatgccgcgcgccgggtcattacagaagcaggttatggcg > 1:13798‑M1/1‑7 (MQ=255) cccGGCGCGCGGCATCGTCAACCTGCTGGCAGCGCACGCCGGGGCGAATCGCGGAGATTGCTGCGa > 1:13127947/1‑66 (MQ=255) cccGGCGCGCGGCATCGTCAACCTGCTGGCAGCGCACGCCGGGGCGAATCGCGGAGATTGCTGCGa > 1:14883323/1‑66 (MQ=255) cccGGCGCGCGGCATCGTCAACCTGCTGGCAGCGCACGCCGGGGCGAATCGCGGAGATTGCTGCGa > 1:23825546/1‑66 (MQ=255) cccGGCGCGCGGCATCGTCAACCTGCTGGCAGCGCACGCCGGGGCGAATCGCGGAGATTGCTGCGa > 1:6757471/1‑66 (MQ=255) cccGGCGCGCGGCATCGTCAACCTGCTGGCAGCGCACGCCGGGGCGAATCGCGGAGATTGCTGCGa > 1:13504094/1‑66 (MQ=255) cccGGCCCGCGGCATCGTCAACCTGCTGGCAGCGCACGCCGGGGCGAATCGCGGAGATTGCTGCGa > 1:4240701/1‑66 (MQ=255) cGGCGtgcgctgccagcaggttgacgatgccgcgcgccgggtcattacagaagcaggttatggcgact < 1:19772840‑M1/68‑64 (MQ=255) ggCGCGCGGCATCGTCAACCTGCTGGCAGCGCACGCCGGGGCGAATCGCGGAGATTGCTGCGAGCtgt < 1:12415915/68‑1 (MQ=255) ggCGCGCGGCATCGTCAACCTGCTGGCAGCGCACGCCGGGGCGAATCGCGGAGATTGCTGCGAGCtgt < 1:5212268/68‑1 (MQ=255) ggCGCGCGGCATCGTCAACCTGCTGGCAGCGCACGCCGGGGCGAATCGCGGAGATTGCTGCGAGCtgt < 1:31992895/68‑1 (MQ=255) cGtgcgctgccagcaggttgacgatgccgcgcgccgggtcattacagaagcaggttatggcgactatt > 1:31356246‑M1/1‑2 (MQ=255) cGtgcgctgccagcaggttgacgatgccgcgcgccgggtcattacagaagcaggttatggcgactat < 1:12898811‑M1/67‑66 (MQ=255) cGtgcgctgccagcaggttgacgatgccgcgcgccgggtcattacagaagcaggttatggcgactat < 1:3316410‑M1/67‑66 (MQ=255) | TGCCGATAGCGTGACCGGTGTTATGACCGAAATAGTCGCCATAACCTGCTTCTGTAATGACCCGGCGCGCGGCATCGTCAACCTGCTGGCAGCGCACGCCGGGGCGAATCGCGGAGATTGCTGCGAGCTGTGC > CP009273/2499226‑2499358 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |