| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 2875593 = | 380 (0.850) | 13 (0.040) | 12/76 | NT | 5.0% | coding (404/483 nt) | casB | CRISP RNA (crRNA) containing Cascade antiviral complex protein |
| ? | CP009273 | 2875611 = | 236 (0.780) | coding (386/483 nt) | casB | CRISP RNA (crRNA) containing Cascade antiviral complex protein | |||||
Only 100 of 558 total aligned reads displayed.
TTGTGGTCAATACAAAATCTTCCAGAAGTTGCTGGCGTTCGCGCTTTCCCCACCAGGTCAACATCCTGGCCATTAATGGCCAGTCAAGTACGGGTTCGGCGTGAGTAAGTAATCGACGTAACTGGACCATA > CP009273/2875528‑2875658 | gctgacagaacagccgatatggtccagttacgtcgattacttactcacgccgaacccgtacttgaCTg < 1:12219100‑M1/3‑1 (MQ=255) tgacagaacagccgatatggtccagttacgtcgattacttactcacgccgaacccgtacttgaCTgg > 1:27604548‑M1/64‑67 (MQ=255) tgacagaacagccgatatggtccagttacgtcgattacttactcacgccgaacccgtacttgaCTgg > 1:32898175‑M1/64‑67 (MQ=255) tgacagaacagccgatatggtccagttacgtcgattacttactcacgccgaacccgtacttgaCTGGc > 1:8499254‑M1/64‑68 (MQ=255) tgacagaacagccgatatggtccagttacgtcgattacttactcacgccgaacccgtacttgaCTGGc > 1:5169691‑M1/64‑68 (MQ=255) gacagaacagccgatatggtccagttacgtcgattacttactcacgccgcacccgtacttgaCTGGcc > 1:21482217‑M1/63‑68 (MQ=255) ggTCAATACAAAATCTTCCAGAAGTTGCTGGCGTTCGCGCTTTCCCCACCAGGTCAACATCCTGGcc < 1:19140040/67‑1 (MQ=255) ggTCAATACAAAATCTTCCAGAAGTTGCTGGCGTTCGCGCTTTCCCCACCAGGTCAACATCCTGGCCa < 1:24973061/68‑1 (MQ=255) gTCAATACAAAATCTTCCAGAAGTTGCTGGCGTTCGCGCTTTCCCCACCAGGTCAACATCCTGGCCAt > 1:25523091/1‑68 (MQ=255) tCAATACAAAATCTTCCAGAAGTTGCTGGCGTTCGCGCTTTCCCCACCAGGTCAACATCCTGGCCAt < 1:33694859/67‑1 (MQ=255) tCAATACAAAATCTTCCAGAAGTTGCTGGCGTTCGCGCTTTCCCCACCAGGTCAACATCCTGGCCAt < 1:26029117/67‑1 (MQ=255) tCAATACAAAATCTTCCAGAAGTTGCTGGCGTTCGCGCTTTCCCCACCAGGTCAACATCCTGGCCAt < 1:34468390/67‑1 (MQ=255) tCAATACAAAATCTTCCAGAAGTTGCTGGCGTTCGCGCTTTCCCCACCAGGTCAACATCCTGGCCAt < 1:808386/67‑1 (MQ=255) agaacagccgatatggtccagttacgtcgattacttactcacgccgaacccgtacttgaCTGGCCAtt < 1:14693849‑M1/9‑1 (MQ=255) cAATACAAAATCTTCCAGAAGTTGCTGGCGTTCGCGCTTTCCCCACCAGGTCAACATCCTGGCCAtt < 1:29821296/67‑1 (MQ=255) cAATACAAAATCTTCCAGAAGTTGCTGGCGTTCGCGCTTTCCCCACCAGGTCAACATCCTGGCCAtt < 1:35158972/67‑1 (MQ=255) cAATACAAAATCTTCCAGAAGTTGCTGGCGTTCGCGCTTTCCCCACCAGGTCAACATCCTGGCCAtt < 1:3257952/67‑1 (MQ=255) cAATACAAAATCTTCCAGAAGTTGCTGGCGTTCGCGCTTTCCCCACCAGGTCAACATCCTGGCCAtt < 1:15549020/67‑1 (MQ=255) cAATACAAAATCTTCCAGAAGTTGCTGGCGTTCGCGCTTTCCCCACCAGGTCAACATCCTGGCCAtt < 1:15870588/67‑1 (MQ=255) cAATACAAAATCTTCCAGAAGTTGCTGGCGTTCGCGCTTTCCCCACCAGGTCAACATCCTGGCCAtt < 1:31238041/67‑1 (MQ=255) cAATACAAAATCTTCCAGAAGTTGCTGGCGTTCGCGCTTTCCCCACCAGGTCAACATCCTGGCCAtt < 1:11204045/67‑1 (MQ=255) acagccgatatggtccagttacgtcgattacttactcacgccgaacccgtacttgaCTGGCCAtt > 1:17902056‑M1/57‑65 (MQ=255) aCAAAATCTTCCAGAAGTTGCTGGCGTTCGCGCTTTCCCCACCAGGTCAACATCCTGGCCATTAATgg < 1:34748686/68‑1 (MQ=255) aCAAAATCTTCCAGAAGTTGCTGGCGTTCGCGCTTTCCCCACCAGGTCAACATCCTGGCCATTAATg > 1:27978713/1‑67 (MQ=255) aCAAAATCGTCCAGAAGTTGCTGGCGTTCGCGCTTTCCCCACCAGGTCAACATCCTGGCCATTAATg > 1:18106164/1‑67 (MQ=255) gccgatatggtccagttacgtcgattacttactcacgccgaacccgtacttgaCTGGCCATTAATgg < 1:36211571‑M1/14‑1 (MQ=255) cgatatggtgcagttacgtcgattacttactcacgccgaacccgtacttgaCTGGCCATTAATgg > 1:6777158‑M1/52‑65 (MQ=255) cgatatggtccagttacgtcgattacttactcacgccgaacccgtacttgaCTGGCCATTAATgg > 1:32218587‑M1/52‑65 (MQ=255) cgatatggtccagttacgtcgattacttactcacgccgaacccgtacttgaCTGGCCATTAATGGcc > 1:19555378‑M1/52‑67 (MQ=255) cgatatggtccagttacgtcgattacttactcacgccgaacccgtacttgaCTGGCCATTAATGGcc > 1:13438069‑M1/52‑67 (MQ=255) cgatatggtccagttacctcgattacttactcacgccgaacccgtacttgaCTGGCCATTAATg > 1:7232304‑M1/52‑64 (MQ=255) aTCTTCCAGAAGTTGCTGGCGTTCGCGCTTTCCCCACCAGGTCAACATCCTGGCCATTAATGGCCAg > 1:17290356/1‑67 (MQ=255) aTCTTCCAGAAGTTGCTGGCGTTCGCGCTTTCCCCACCAGGTCAACATCCTGGCCATTAATGGCCAg > 1:2623934/1‑67 (MQ=255) aTCTTCCAGAAGTTGCTGGCGTTCGCGCTTTCCCCACCAGGTCAACATCCTGGCCATTAATGGCCAg > 1:30264530/1‑67 (MQ=255) aTCTTCCAGAAGTTGCTGGCGTTCGCGCTTTCCCCACCAGGTCAACATCCTGGCCATTAATGGCCAg > 1:28722694/1‑67 (MQ=255) aTCTTCCAGAAGTTGCTGGCGTTCGCGCTTTCCCCACCAGGTCAACATCCTGGCCATTAATGGCCAg > 1:4830752/1‑67 (MQ=255) aTCTTCCAGAAGTTGCTGGCGTTCGCGCTTTCCCCACCAGGTCAACATCCTGGCCATTAATGGCCAGt < 1:24823003/68‑1 (MQ=255) aTCTTCCAGAAGTTGCTGGCGTTCGCGCTTTCCCCACCAGGTCAACATCCTGGCCATTAATGGCCAGt < 1:1419932/68‑1 (MQ=255) aTCTTCCAGAAGTTGCTGGCGTTCGCGCTTTCCCCACCAGGTCAACATCCTGGCCATTAATGGCCAGt > 1:11521526/1‑68 (MQ=255) aTCTTCCAGAAGTTGCTGGCGTTCGCGCTTTCCCCACCAGGTCAACATCCTGGCCATTAATGGCCAGt < 1:2951922/68‑1 (MQ=255) aTCTTCCAGAAGTTGCTGGCGTTCGCGCTTTCCCCACCAGGTCAACATCCTGGCCATTAATGGCCAGt < 1:5004474/68‑1 (MQ=255) aTCTTCCAGAAGTTGCTGGCGTTCGCGCTTTCCCCACCAGGTCAACATCCTGGCCATTAATGGCCAGt < 1:4248712/68‑1 (MQ=255) tCTTCCAGAAGTTGCTGGCGTTCGCGCTTTCCCCACCAGGTCAACATCCTGGCCATTAATGGCCAGTc < 1:30494603/68‑1 (MQ=255) ttCCAGAAGTTGCTGGCGTTCGCGCTTTCCCCACCAGGTCAACATCCTGGCCATTAATGGCCAGTCaa < 1:218621/68‑1 (MQ=255) ttCCAGAAGTTGCTGGCGTTCGCGCTTTCCCCACCAGGTCAACATCCTGGCCATTAATGGCCAGTCaa < 1:29378691/68‑1 (MQ=255) ccAGAAGTTGCTGGCGTTCGCGCTTTCCCCACCAGGTCAACATCCTGGCCATTAATGGCCAGTCAAGt > 1:12988935/1‑68 (MQ=255) aGAAGTTGCTGGCGTTCGCGCTTTCCCCACCAGGTCAACATCCTGGCCATTAATGGCCAGTCAAGTAc > 1:36771602/1‑68 (MQ=255) aGTTGCTGGCGTTCGCGCTTTCCCCACCAGGTCAACATCCTGGCCATTAATGGCCAGTCAAGTACggg > 1:16400352/1‑68 (MQ=255) tGGCGTTCGCGGTTTCCCCAGCATGTCTACTTCCTGGCGATTATTGGCCAGTCAAgttcgggttcgg < 1:6461268/67‑1 (MQ=255) tGGCGTTCGCGCTTTCCCCACCAGGTCAACATCCTGGCCATTAATGGCCAGTCAAGTACGGGTTCGGc < 1:21118914/68‑1 (MQ=255) cGTTCGCGCTTTCCCCACCAGGTCAACATCCTGGCCATTAATGGCCAGTCAAGTACGGGTTCGGCGTg > 1:5679285/1‑68 (MQ=255) gTTCGCGCTTTCCCCACCAGGTCAACATCCTGGCCATTAATGGCCAGTCAAGTACGGGTTCGGCGTg < 1:31979119/67‑1 (MQ=255) gTTCGCGCTTTCCCCACCAGGTCAACATCCTGGCCATTAATGGCCAGTCAAGTACGGGTTCGGCGTg < 1:4024781/67‑1 (MQ=255) gTTCGCGCTTTCCCCACCAGGTCAACATCCTGGCCATTAATGGCCAGTCAAGTACGGGTTCGGCGTGa < 1:22603690/68‑1 (MQ=255) gTTCGCGCTTTCCCCACCAGGTCAACATCCTGGCCATTAATGGCCAGTCAAGTACGGGTTCGGCGTGa < 1:35809651/68‑1 (MQ=255) gTTCGCGCTTTCCCCACCAGGTCAACATCCTGGCCATTAATGGCCAGTCAAGTACGGGTTCGGCGTGa < 1:7705848/68‑1 (MQ=255) gTTCGCGCTTTCCCCACCAGGTCAACATCCTGGCCATTAATGGCCAGTCAAGTACGGGTTCGGCGTGa < 1:10472786/68‑1 (MQ=255) tCGCGCTTTCCCCACCAGGTCAACATCCTGGCCATTAATGGCCAGTCAAGTACGGGTTCGGCGTGagt < 1:33932700/68‑1 (MQ=255) tCGCGCTTTCCCCACCAGGTCAACATCCTGGCCATTAATGGCCAGTCAAGTACGGGTTCGGCGTGagt < 1:956746/68‑1 (MQ=255) tCGCGCTTTCCCCACCAGGTCAACATCCTGGCCATTAATGGCCAGTCAAGTACGGGTTCGGCGTGag < 1:25213986/67‑1 (MQ=255) cgcgCTTTCCCCACCAGGTCAACATCCTGGCCATTAATGGCCAGTCAAGTACGGGTTCGGCGTGagta < 1:15137318/68‑1 (MQ=255) gcTTTCCCCACCAGGTCAACATCCTGGCCATTAATGGCCAGTCAAGTACGGGTTCGGCGTGagtaagt > 1:29000759/1‑68 (MQ=255) gcTTTCCCCACCAGGTCAACATCCTGGCCATTAATGGCCAGTCAAGTACGGGTTCGGCGTGagtaagt > 1:17433083/1‑68 (MQ=255) gcTTTCCCCACCAGGTCAACATCCTGGCCATTAATGGCCAGTCAAGTACGGGTTCGGCGTGagtaagt > 1:18572247/1‑68 (MQ=255) ccccACCAGGTCAACATCCTGGCCATTAATGGCCAGTCAAGTACGGGTTCGGCGTGAGTAAGTAATCg < 1:20219148/68‑1 (MQ=255) ccccACCAGGGCAACATCCTGGCCATTAATGGCCAGTCAAGTACGGGTTCGGCGTGAGTAAGTAATCg < 1:32263490/68‑1 (MQ=255) gccgaacccgtacttgaCTGGCCATTAATGGCCAGTCAAGTACGGGTTCGGGGTGAGTAAGTAATCg < 1:24149579‑M1/50‑1 (MQ=255) ccaccaGGTCAACATCCTGGCCATTAATGGCCAGTCAAGTACGGGTTCGGCGTGAGTAAGTAATCGAc < 1:12777928/68‑1 (MQ=255) ccaGGTCAACATCCTGGCCATTAATGGCCAGTCAAGTACGGGTTCGGCGTGAGTAAGTAATCGACGTa < 1:6238246/68‑1 (MQ=255) ccaGGTCAACATCCTGGCCATTAATGGCCAGTCAAGTACGGGTTCGGCGTGAGTAAGTAATCGACGTa > 1:16741357/1‑68 (MQ=255) ccaGGTCAACATCCTGGCCATTAATGGCCAGTCAAGTACGGGTTCGGCGTGAGTAAGTAATCGACGTa < 1:4407000/68‑1 (MQ=255) ccaGGTCAACATCCTGGCCATTAATGGCCAGTCAAGTACGGGTTCGGCGTGAGTAAGTAATCGACGTa > 1:13191648/1‑68 (MQ=255) ccaGGTCAACATCCTGGCCATTAATGGCCAGTCAAGTACGGGTTCGGCGTGAGTAAGTAATCGACGTa > 1:36446568/1‑68 (MQ=255) ccaGGTCAACATCCTGGCCATTAATGGCCAGTCAAGTACGGGTTCGGCGTGAGTAAGTAATCGACGTa > 1:35546634/1‑68 (MQ=255) ccaGGTCAACATCCTGGCCATTAATGGCCAGTCAAGTACGGGTTCGGCGTGAGTAAGTAATCGACGTa < 1:9034817/68‑1 (MQ=255) ccaGGTCAACATCCTGGCCATTAATGGCCAGTCAAGTACGGGTTCGGCGTGAGTAAGTAATCGACGTa > 1:23861597/1‑68 (MQ=255) ccaGGTCAACATCCTGGCCATTAATGGCCAGTCAAGTACGGGTTCGGCGTGAGTAAGTAATCGACGTa < 1:33278815/68‑1 (MQ=255) ccaGGTCAACATCCTGGCCATTAATGGCCAGTCAAGTACGGGTTCGGCGTGAGTAAGTAATCGACGTa > 1:26508228/1‑68 (MQ=255) ccaGGTCAACATCCTGGCCATTAATGGCCAGTCAAGTACGGGTTCGGCGTGAGTAAGTAATCGACGTa > 1:31768332/1‑68 (MQ=255) ccaGGTCAACATCCTGGCCATTAATGGCCAGTCAAGTACGGGTTCGGCGTGAGTAAGTAATCGACGTa > 1:26843869/1‑68 (MQ=255) ccaGGTCAACATCCTGGCCATTAATGGCCAGTCAAGTACGGGTTCGGCGTGAGTAAGTAATCGACGTa > 1:27141703/1‑68 (MQ=255) ccaGGTCAACATCCTGGCCATTAATGGCCAGTCAAGTACGGGTTCGGCGTGAGGAAGTAATCGACGTa > 1:9376474/1‑68 (MQ=255) caGGTCAACATCCTGGCCATTAATGGCCAGTCAAGTACGGGTTCGGCGTGAGTAAGTAATCGACGTaa < 1:22232588/68‑1 (MQ=255) cccgtacttgaCTGGCCATTAATGGCCAGTCAAGTACGGGTTCGGCGTGAGTAAGTAATCGACGTa < 1:23216500‑M1/55‑1 (MQ=255) gTCAACATCCTGGCCATTAATGGCCAGTCAAGTACGGGTTCGGCGTGAGTAAGTAATCGACGTAACTg > 1:16943705/1‑68 (MQ=255) tacttgaCTGGCCATTAATGGCCAGTCAAGTACGGGTTCGGCGTGAGTAAGTAATCGACGTAACTgg < 1:30995007‑M1/60‑1 (MQ=255) cAACATCCTGGCCATTAATGGCCAGTCTAGTACGGGTTCGGCGTGAGTAAGTAATCGACGTAACTgg < 1:1085726/67‑1 (MQ=255) cAACATCCTGGCCATTAATGGCCAGTCAAGTACGGGTTCGGCGTGAGTAAGTAATCGACGTAACTgg < 1:23467069/67‑1 (MQ=255) cAACATCCTGGCCATTAATGGCCAGTCAAGTACGGGTTCGGCGTGAGTAAGTAATCGACGTAACTgg < 1:18895142/67‑1 (MQ=255) acttgaCTGGCCATTAATGGCCAGTCAAGTACGGGTTCGGCGTGAGTAAGTAATCGACGTAACTGGa < 1:13303076‑M1/61‑1 (MQ=255) aaCATCCTGGCCATTAATGGCCAGTCAAGTACGGGTTCGGCGTGAGTAAGTAATCGACGTAACTGGa > 1:10094779/1‑67 (MQ=255) aTCCTGGCCATTAATGGCCAGTCAAGTACGGGTTCGGCGTGAGTAAGTAATCGACGTCACTGGACCat > 1:19715534/1‑68 (MQ=255) aTCCTGGCCATTAATGGCCAGTCAAGTACGGGTTCGGCGTGAGTAAGTAATCGACGTAACTGGACCat > 1:5981992/1‑68 (MQ=255) aTCCTGGCCATTAATGGCCAGTCAAGTACGGGTTCGGCGTGAGTAAGTAATCGACGTAACTGGACCat < 1:37146511/68‑1 (MQ=255) aTCCTGGCCATTAATGGCCAGTCAAGTACGGGTTCGGCGTGAGTAAGTAATCGACGTAACTGGACCat > 1:2067721/1‑68 (MQ=255) aTCCTGGCCATTAATGGCCAGTCAAGTACGGGTTCGGCGTGAGTAAGTAATCGACGTAACTGGACCat > 1:24510907/1‑68 (MQ=255) aTCCTGGCCATTAATGGCCAGGCAAGTACGGGTTCGGCGTGAGTAAGTAATCGACGTAAGTGGACCat > 1:2834398/1‑68 (MQ=255) tCCTGGCCATTAATGGCCAGTCAAGTACGGGTTCGGCGTGAGTAAGTAATCGACGTAACTGGACCata > 1:13812240/1‑68 (MQ=255) tCCTGGCCATTAATGGCCAGTCAAGTACGGGTTCGGCGTGAGTAAGTAATCGACGTAACTGGACCata > 1:21614155/1‑68 (MQ=255) aCTGGCCATTAATGGCCAGTCAAGTACGGGTTCGGCGTGAGTAAGTAATCGACGTAACTGGCCCata < 1:1184239‑M1/66‑1 (MQ=255) | TTGTGGTCAATACAAAATCTTCCAGAAGTTGCTGGCGTTCGCGCTTTCCCCACCAGGTCAACATCCTGGCCATTAATGGCCAGTCAAGTACGGGTTCGGCGTGAGTAAGTAATCGACGTAACTGGACCATA > CP009273/2875528‑2875658 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |