| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 2875593 = | 380 (0.850) | 13 (0.040) | 12/76 | NT | 5.0% | coding (404/483 nt) | casB | CRISP RNA (crRNA) containing Cascade antiviral complex protein |
| ? | CP009273 | 2875611 = | 236 (0.780) | coding (386/483 nt) | casB | CRISP RNA (crRNA) containing Cascade antiviral complex protein | |||||
Only 100 of 549 total aligned reads displayed.
ATCTTCCAGAAGTTGCTGGCGTTCGCGCTTTCCCCACCAGGTCAACATCCTGGCCATTAATGGCCAGTCAAGTACGGGTTCGGCGTGAGTAAGTAATCGACGTAACTGGACCATATCGGCTGTTCTGTCAGCCCG > CP009273/2875544‑2875678 | aTCTTCCAGAAGTTGCTGGCGTTCGCGCTTTCCCCACCAGGTCAACATCCTGGCCATTAATGGCCAGt < 1:10188737/68‑1 (MQ=255)aTCTTCCAGAAGTTGCTGGCGTTCGCGCTTTCCCCACCAGGTCAACATCCTGGCCATTAATGGCCAGt < 1:36523596/68‑1 (MQ=255)aTCTTCCAGAAGTTGCTGGCGTTCGCGCTTTCCCCACCAGGTCAACATCCTGGCCATTAATGGCCAGt < 1:35791402/68‑1 (MQ=255)aTCTTCCAGAAGTTGCTGGCGTTCGCGCTTTCCCCACCAGGTCAACATCCTGGCCATTAATGGCCAGt < 1:19526186/68‑1 (MQ=255) tatggtccagttacgtcgattacttactcacgccgaacccgtacttgactggccattaatggccagt < 1:21969766‑M2/1‑1 (MQ=255) cctCCAGAAGTTGCTGGCGTTCGCGCTTTCCCCACCAGGTCAACATCCTGGCCATTAATGGCCAGTCa < 1:5837661/66‑1 (MQ=255) ttCCAGAAGTTGCTGGCGTTCGCGCTTTCCCCACCAGGTCAACATCCTGGCCATTAATGGCCAGTCaa < 1:31319366/68‑1 (MQ=255) ttCCAGAAGTTGCTGGCGTTCGCGCTTTCCCCACCAGGTCAACATCCTGGCCATTAATGGCCAGTCaa < 1:23684039/68‑1 (MQ=255) tCCAGAAGTTGCTGGCGTTCGCGCTTTCCCCACCAGGTCAACATCCTGGCCATTAATGGCCAGTCAAg < 1:6882743/68‑1 (MQ=255) ggtccagttacgtcgattacttactcacgccgaacccgtacttgaCTGGCCATTAATGGCCAGTCAAg > 1:25698341‑M1/46‑68 (MQ=255) ccAGAAGTTGCTGGCGTTCGCGCTTTCCCCACCAGGTCAACATCCTGGCCATTAATGGCCAGTCAAGt > 1:24252719/1‑68 (MQ=255) ccAGAAGTTGCTGGCGTTCGCGCTTTCCCCACCAGGTCAACATCCTGGCCATTAATGGCCAGTCAAGt < 1:14489194/68‑1 (MQ=255) cagttacgtcgattacttactcacgccgaacccgtacttgaCTGGCCATTAATGGCCAGTCAAGTACg > 1:9765694‑M1/42‑68 (MQ=255) aaGTTGCTGGCGTTCGCGCTTTCCCCACCAGGTCAACATCCTGGCCATTAATGGCCAGTCAAGTACgg > 1:11656608/1‑68 (MQ=255) aGTTGCTGGCGTTCGCGCTTTCCCCACCAGGTCAACATCCTGGCCATTAATGGCCAGTCAAGTACggg > 1:4910749/1‑68 (MQ=255) aGTTGCTGGCGTTCGCGCTTTCCCCACCAGGTCAACATCCTGGCCATTAATGGCCAGTCAAGTACggg > 1:12065158/1‑68 (MQ=255) aGTTGCTGGCGTTCGCGCTTTCCCCACCAGGTCAACATCCTGGCCATTAATGGCCAGTCAAGTACggg < 1:26197963/68‑1 (MQ=255) aGTTGCTGGCGTTCGCGCTTTCCCCACCAGGTCAACATCCAGGCCATTACTGGCCAGTCAAGTACggg > 1:25462828/1‑68 (MQ=255) aGTTGCTGGCGTGCGCGCTTTACCCACCAGGTCAACATCCTGGCCATTAATGGCCAGTCAAGTACggg < 1:6410450/68‑1 (MQ=255) cTGGCGTTCGCGCTTTCCCCACCAGGTCAACATCCTGGCCATTAATGGCCAGTCAAGTACGGGTTCg > 1:5293595/1‑67 (MQ=255) ggCGTTCGCGCTTTCCCCACCAGGTCAACATCCTGGCCATTAATGGCCAGGCAAGTACGGGTTCGGCg > 1:4027505/1‑68 (MQ=255) cGTTCGCGCTTTCCCCACCAGGTCAACATCCTGGCCATTAATGGCCAGTCAAGTACGGGTTCGGCGTg > 1:24905084/1‑68 (MQ=255) gTTCGCGCTTTCCCCACCAGGTCAACATCCTGGCCATTAATGGCCATTCAAGTACGGGTTCGGCGTg < 1:32758151/67‑1 (MQ=255) gTTCGCGCTTTCCCCACCAGGTCAACATCCTGGCCATTAATGGCCAGTCAAGTACGGGTTCGGCGTg < 1:31979119/67‑1 (MQ=255) gTTCGCGCTTTCCCCACCAGGTCAACATCCTGGCCATTAATGGCCAGTCAAGTACGGGTTCGGCGTGa < 1:17295012/68‑1 (MQ=255) gTTCGCGCTTTCCCCACCAGGTCAACATCCTGGCCATTAATGGCCAGTCAAGTACGGGTTCGGCGTGa < 1:18696120/68‑1 (MQ=255) gTTCGCGCTTTCCCCACCAGGTCAACATCCTGGCCATTAATGGCCAGTCAAGTACGGGTTCGGCGTGa < 1:16132225/68‑1 (MQ=255) tacttactcacgccgaacccgtacttgaCTGGCCATTAATGGCCAGTCAAGTACGGGTTCGGCGTGag > 1:34894057‑M1/29‑68 (MQ=255) tCGCGCTTTCCCCACCAGGTCAACATCCTGGCCATTAATGGCCAGTCAAGTACGGGTTCGGCGTGagt < 1:33932700/68‑1 (MQ=255) tCGCGCTTTCCCCACCAGGTCAACATCCTGGCCATTAATGGCCAGTCAAGTACGGGTTCGGCGTGag < 1:32080484/67‑1 (MQ=255) tCGCGCTTTCCCCACCAGGTCAACATCCTGGCCATTAATGGCCAGTCAAGTACGGGTTCGGCGTGag < 1:25213986/67‑1 (MQ=255) acttactcacgccgaacccgtacttgcctggccattaatggccagTCAAGTACGGGTTCGGCGTGagt < 1:28120381‑M2/23‑1 (MQ=255) gcTTTCCCCACCAGGTCAACATCCTGGCCATTAATGGCCAGTCAAGTACGGGTTCGGCGTGagtaagt < 1:29381875/68‑1 (MQ=255) gcTTTCCCCACCAGGTCAACATCCTGGCCATTAATGGCCAGTCAAGTACGGGTTCGGCGTGagtaag < 1:31021121/67‑1 (MQ=255) cgccgaccccgtactgcactgcccataaatggccagTCAAGAACGGGTTCGGCGTGAGTAAGTAATCg < 1:2987624‑M2/32‑1 (MQ=255) ccccACCAGGTCAACATCCTGGCCATTAATGGCCAGTCAAGTACGGGTTCGGCGTGAGTAAGTAATCg < 1:2755518/68‑1 (MQ=255) ccccACCAGGGCAACATCCTGGCCATTAATGGCCAGTCAAGTACGGGTTCGGCGTGAGTAAGTAATCg < 1:32263490/68‑1 (MQ=255) ccaccaGGTCAACATCCTGGCCATTAATGGCCAGTCAAGTACGGGTTCGGCGTGAGTAAGTAATCGAc < 1:7713241/68‑1 (MQ=255) caccaGGTCAACATCCTGGCCATTAATGGCCAGTCAAGTACGGGTTCGGCGTGAGTAAGTAATCGACg > 1:11378856/1‑68 (MQ=255) ccaGGTCAACATCCTGGCCATTAATGGCCAGTCAAGTa > 1:505886/1‑38 (MQ=255) ccaGGTCAACATCCTGGCCATTAATGGCCAGTCAAGTACGGGTTCGGCGTGAGTAAGTAATCGACGTa > 1:31768332/1‑68 (MQ=255) ccaGGTCAACATCCTGGCCATTAATGGCCAGTCAAGTACGGGTTCGGCGTGAGTAAGTAATCGACGTa > 1:26508228/1‑68 (MQ=255) ccaGGTCAACATCCTGGCCATTAATGGCCAGTCAAGTACGGGTTCGGCGTGAGTAAGTAATCGACGTa > 1:12666952/1‑68 (MQ=255) ccaGGTCAACATCCTGGCCATTAATGGCCAGTCAAGTACGGGTTCGGCGTGAGTAAGTAATCGACGTa > 1:288223/1‑68 (MQ=255) ccaGGTCAACATCCTGGCCATTAATGGCCAGTCAAGTACGGGTTCGGCGTGAGTAAGTAATCGACGTa < 1:29094895/68‑1 (MQ=255) ccaGGTCAACATCCTGGCCATTAATGGCCAGTCAAGTACGGGTTCGGCGTGAGTAAGTAATCGACGTa > 1:34470733/1‑68 (MQ=255) ccaGGTCAACATCCTGGCCATTAATGGCCAGTCAAGTACGGGTTCGGCGTGAGTAAGTAATCGACGTa > 1:21731287/1‑68 (MQ=255) ccaGGTCAACATCCTGGCCATTAATGGCCAGTCAAGTACGGGTTCGGCGTGAGTAAGTAATCGACGTa > 1:21293848/1‑68 (MQ=255) ccaGGTCAACATCCTGGCCATTAATGGCCAGTCAAGTACGGGTTCGGCGTGAGTAAGTAATCGACGTa < 1:20557451/68‑1 (MQ=255) ccaGGTCAACATCCTGGCCATTAATGGCCAGTCAAGTACGGGTTCGGCGTGAGTAAGTAATCGACGTa > 1:13408910/1‑68 (MQ=255) ccaGGTCAACATCCTGGCCATTAATGGCCAGTCAAGTACGGGTTCGGCGTGAGTAAGTAATCGACGTa < 1:10533969/68‑1 (MQ=255) ccaGGTCAACATCCTGGCCATTAATGGCCAGTCAAGTACGGGTTCGGCGTGAGTAAGTAATCGACGTa < 1:1553421/68‑1 (MQ=255) ccaGGTCAACATCCTGGCCATTAATGGCCAGTCAAGTACGGGTTCGGCGTGAGTAAGTAATCGACGTa > 1:14118729/1‑68 (MQ=255) ccaGGTCAACATCCTGGCCATTAATGGCCAGTCAAGTACGGGTTCGGCGTGAGGAAGTAATCGACGTa > 1:9376474/1‑68 (MQ=255) caGGTCAACATCCTGGCCATTAATGGCCAGTCAAGTACGGGTTCGGCGTGAGTAAGTAATCGACGTaa < 1:17481302/68‑1 (MQ=255) tCAACATCCTGGCCATTAATGGCCAGTCAAGTACGGGTTCGGCGTGAGTAAGTAATCGACGTAACTgg > 1:27178257/1‑68 (MQ=255) tacttgaCTGGCCATTAATGGCCAGTCAAGTACGGGTTCGGCGTGAGTAAGTAATCGACGTAACTgg < 1:24722431‑M1/60‑1 (MQ=255) cAACATCCTGGCCATTAATGGCCAGTCAAGTACGGGTTCGGCGTGAGTAAGTAATCGACGTAACTgg < 1:23467069/67‑1 (MQ=255) aaCATCCTGGCCATTAATGGCCAGTCAAGTACGGGTTCGGCGTGAGTAAGTAATCGACGTAACTGGa > 1:10094779/1‑67 (MQ=255) aaCATCCTGGCCATTAATGGCCAGTCAAGTACGGGTTCGGCGTGAGTAAGTAATCGACGTAACTGGAc < 1:26675014/68‑1 (MQ=255) cttgaCTGGCCATTAATGGCCAGTCAAGTACGGGTTCGGCGTGAGTAAGTAATCGACGTAACTGGAcc < 1:30872156‑M1/63‑1 (MQ=255) aCATCCTGGCCATTAATGGCCAGTCAAGTACGGGTTCGGCGTGAGTAAGTAATCGACGTAACTGGAcc < 1:18237690/68‑1 (MQ=255) cATCCTGGCCATTAATGGCCAGTCAAGTACGGGTTCGGCGTGAGTAAGTAATCGACGTAACTGGACCa < 1:29612495/68‑1 (MQ=255) cATCCTGGCCATTAATGGCCAGTCAAGTACGGGTTCGGCGTGAGTAAGTAATCGACGTAACTGGACCa < 1:33420751/68‑1 (MQ=255) aTCCTGGCCATTAATGGCCAGTCAAGTACGGGTTCGGCGTGAGTAAGTAATCGACGTAACTGGACCat > 1:13635110/1‑68 (MQ=255) aTCCTGGCCATTAATGGCCAGTCAAGTACGGGTTCGGCGTGAGTAAGTAATCGACGTAACTGGACCat < 1:37105348/68‑1 (MQ=255) aTCCTGGCCATTAATGGCCAGTCAAGTACGGGTTCGGCGTGAGTAAGTAATCGACGTAACTGGACCat > 1:2232651/1‑68 (MQ=255) aTCCTGGCCATTAATGGCCAGTCAAGTACGGGTTCGGCGTGAGTAAGTAATCGACGTAACTGGACCat < 1:13111328/68‑1 (MQ=255) aTCCTGGCCATTAATGGCCAGTCAAGTACGGGTTCGGCGTGAGTAAGTAATCGACGTAACTGGACCat > 1:33138504/1‑68 (MQ=255) tCCTGGCCATTAATGGCCAGTCAAGTACGGGTTCGGCGTGAGTAAGTAATCGACGTAACTGGACCata > 1:30358602/1‑68 (MQ=255) TGGCCATTAATGGCCAGTCAAGTACGGGTTCGGCGTGAGTAAGTAATCGACGTAACTGGACCATATCg > 1:22831731‑M1/1‑68 (MQ=255) ggccattaatggccagTCAAGTACGGGTTCGGCGTGAGTAAGTAATCGACGTAACTGGACCATATCg > 1:35501975‑M2/17‑67 (MQ=255) ggccattaatggccagTCAAGTACGGGTTCGGCGTGAGTAAGTAATCGACGTAACTGGACCATATCg > 1:16866813‑M2/17‑67 (MQ=255) gccattaatggccagTCAAGTACGGGTTCGGCGTGAGTAAGTAATCGACGTAACTGGACCATATCg > 1:14829701‑M2/16‑66 (MQ=255) gccattaatggccagTCAAGTACGGGTTCGGCGTGAGTAAGTAATCGACGTAACTGGACCATATCg > 1:21513536‑M2/16‑66 (MQ=255) GCCATTAATGGCCAGTCAAGTACGGGTTCGGCGTGAGTAAGTAATCGACGTAACTGGACCATATCg < 1:26952041‑M1/66‑1 (MQ=255) ccattaatggccagTCAAGTACGGGTTCGGCGTGAGTAAGTAATCGACGTAACTGGACCATATCg > 1:15211655‑M2/15‑65 (MQ=255) ccattaatggccagTCAAGTACGGGTTCGGCGTGAGTAAGTAATCGACGTAACTGGACCATATCg > 1:1291980‑M2/15‑65 (MQ=255) ccattaatggccagTCAAGTACGGGTTCGGCGTGAGTAAGTAATCGACGTAACTGGACCATATCg > 1:4293042‑M2/15‑65 (MQ=255) ccattaatggccagTCAAGTACGGGTTCGGCGTGAGTAAGTAATCGACGTAACTGGACCATATCGGc < 1:36211571‑M2/53‑1 (MQ=255) caATTAATGGCCAGTCAAGTACGCGTTCGCCGTCAGTAAGTAATCGACGTAACTGGACCATATCg < 1:16597257‑M1/63‑1 (MQ=255) CCATTAATGGCCAGTCAAGTACGGGTTCGGCGTGAGTAAGTAATCGACGTAACTGGACCATATCg < 1:19163830‑M1/65‑1 (MQ=255) cattaatggccagTCAAGTACGGGTTCGGCGTGAGTAAGTAATCGAGGTAACTGGACCATATCg > 1:7232304‑M2/14‑64 (MQ=255) cattaatggccagTCAAGTACGGGTTCGGCGTGAGTAAGTAATCGACGTAACTGGACCATATCGGCTg < 1:8961090‑M2/55‑1 (MQ=255) attaatggccagTCAAGTACGGGTTCGGCGTGAGTAAGTAATCGACGTAACTGGACCATATCGGCTGt < 1:28406672‑M2/56‑1 (MQ=255) aatggccagTCAAGTACGGGTTCGGCGTGAGTAAGTAATCGACGTAACTGGACCATATCGGCTGt > 1:4608905‑M2/10‑65 (MQ=255) aatggccagTCAAGTACGGGTTCGGCGTGAGTAAGTAATCGACGTAACTGGACCATATCGGCTGTTCt < 1:19864086‑M2/59‑1 (MQ=255) aatggccagTCAAGTACGGGTTCGGCGTGAGTAAGTAATCGACGTAACTGGACCATATCGGCTGTTCt < 1:20999661‑M2/59‑1 (MQ=255) AATGGCCAGTCAAGTACGGGTTCGGCGTGAGTAAGTAATCGACGTAACTGGACCATATCGGCTGt < 1:17954154‑M1/65‑1 (MQ=255) atggccagTCAAGTACGGGTTCGGCGTGAGTAAGTAATCGACGTAACTGGACCATATCGGCTGt > 1:6663533‑M2/9‑64 (MQ=255) gccagTCAAGTACGGGTTCGGCGTGAGTAAGTAATCGACGTAACTGGACCATATCGGCTGTTCTGTCa > 1:19594772‑M2/6‑68 (MQ=255) gccagTCAAGTACGGGTTCGGCGTGAGTAAGTAATCGACGTAACTGGACCATATCGGCTGTTCTGTCa > 1:8499254‑M2/6‑68 (MQ=255) GCCAGTCAAGTACGGGTTCGGCGTGAGTAAGTAATCGACGTAACTGGACCATATCGGCTGTTCTGTCa < 1:753981‑M1/68‑1 (MQ=255) ccagTCAAGTACGGGTTCGGCGTGAGTAAGTAATCGACGTAACTGGACCATATCGGCTGTTCTGTCa > 1:6136135‑M2/5‑67 (MQ=255) ccagTCAAGTACGGGTTCGGCGTGAGTAAGTAATCGACGTAACTGGACCATATCGGCTGTTCTGTCa > 1:13289945‑M2/5‑67 (MQ=255) CCAGTCAAGTACGGGTTCGGCGTGAGTAAGTAATCGACGTAACTGGACCATATCGGCTGTTCTGTCa < 1:35103479‑M1/67‑1 (MQ=255) CCAGTCAAGTACGGGTTCGGCGTGAGTAAGTAATCGACGTAACTGGACCATATCGGCTGTTCTGTCa < 1:23188847‑M1/67‑1 (MQ=255) CCAGTCAAGTACGGGTTCGGCGTGAGTAAGTAATCGACGTAACTGGACCATATCGGCTGTTCTGTCa < 1:24092788‑M1/67‑1 (MQ=255) cagTCAAGTACGGGTTCGGCGTGAGTAAGTAATCGACGTAACTGGACCATATCGGCTGTTCTGTCAGc < 1:12219100‑M2/65‑1 (MQ=255) CAGTCAAGTACGGGTTCGGCGTGAGTAAGTAATCGACGTAACTGGACCATATCGGCTGTTCTGTCAGc > 1:36871193‑M1/1‑68 (MQ=255) | ATCTTCCAGAAGTTGCTGGCGTTCGCGCTTTCCCCACCAGGTCAACATCCTGGCCATTAATGGCCAGTCAAGTACGGGTTCGGCGTGAGTAAGTAATCGACGTAACTGGACCATATCGGCTGTTCTGTCAGCCCG > CP009273/2875544‑2875678 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |