New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP009273 108768 =342 (0.770)18 (0.050) 6/100 NT 5.6% coding (319/744 nt) zapD FtsZ stabilizer
?CP009273 108799 = 302 (0.760)coding (288/744 nt) zapD FtsZ stabilizer

Only 100 of 459 total aligned reads displayed.

CAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACGCCAATCCAGGTCTGGA  >  CP009273/108732‑108866
                                                                   |                                                                   
 aaTCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCt                                                                     <  1:12978894/67‑1 (MQ=255)
      aaCGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTa                                                                 >  1:11498594/1‑66 (MQ=255)
       gtattgaagcattaattcagcagttaaaagcggcggggagcgtattaatttccgcgccgcTTTTAAct                                                              <  1:29938251‑M2/8‑1 (MQ=255)
       aCGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAAct                                                              <  1:36286504/68‑1 (MQ=255)
         gATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAActgc                                                            <  1:19419030/68‑1 (MQ=255)
         gATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAActgc                                                            <  1:15171462/68‑1 (MQ=255)
         gATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAAct                                                              >  1:8312885/1‑66 (MQ=255)
          aTCTTCACGCAGAAATTGCCCGATACGCGGCGCGGATATTAATACGCTCCCCGCCGCTTTTAAct                                                              >  1:36168676/1‑65 (MQ=255)
          aTCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAAct                                                              >  1:7501262/1‑65 (MQ=255)
            cTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGa                                                         <  1:7378135/68‑1 (MQ=255)
             ttCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGaa                                                        >  1:4675856/1‑68 (MQ=255)
             ttCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGaa                                                        >  1:3811478/1‑68 (MQ=255)
             ttCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGaa                                                        <  1:25452011/68‑1 (MQ=255)
             ttCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGaa                                                        <  1:24169321/68‑1 (MQ=255)
              agcattaattcagcagttaaatGCGGCGCGGAAAGTAATACGCTCCCCGCCGCGTGGAGCTGCtgagt                                                       <  1:5251580‑M1/46‑3 (MQ=255)
              agcattaattcagcagttaaaaGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAAt                                                       <  1:9254674‑M1/46‑1 (MQ=255)
               cACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAAtt                                                      <  1:8627972/68‑1 (MQ=255)
                aCGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTa                                                     <  1:29404864/68‑1 (MQ=255)
                    aGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATg                                                  <  1:32165473/67‑1 (MQ=255)
                     attcagcagttaaccgcggcggggagcgtattaatttccgcgccgcTTTTAACTGCTGAATTAATGCt                                                <  1:27331269‑M2/22‑1 (MQ=255)
                     attcagcagttaaaagcggcggggagcgtattaatttccgcgccgcTTTTAACTGCTGAATTAATGCt                                                <  1:1923145‑M2/22‑1 (MQ=255)
                     attcagcaggtaaaagcggcggggagcgtattaatttccgcgccgcTTTTAACTGCAGAATTAATGCt                                                <  1:36204427‑M2/22‑1 (MQ=255)
                     atccagcagttaaaagcggcggggagcgtattaatttccgcgccgcTTTTAACTGCTGAATTAATGCt                                                <  1:10785903‑M2/22‑1 (MQ=255)
                       tcagcagttaaaaGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGATTTAATGCTTc                                              <  1:6745900‑M1/55‑1 (MQ=255)
                       aaTTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCt                                                <  1:36249056/66‑1 (MQ=255)
                       aaTTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCt                                                <  1:22162954/66‑1 (MQ=255)
                       aaTTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCt                                                <  1:4928928/66‑1 (MQ=255)
                       aaTTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCt                                                <  1:7155046/66‑1 (MQ=255)
                       aaTTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCt                                                <  1:20777843/66‑1 (MQ=255)
                       aaTTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCt                                                <  1:20365592/66‑1 (MQ=255)
                       aaTTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCt                                                <  1:20093024/66‑1 (MQ=255)
                       aaTTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCt                                                <  1:3247569/66‑1 (MQ=255)
                       aaTTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCt                                                <  1:31248771/66‑1 (MQ=255)
                       aaTTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCt                                                <  1:1843053/66‑1 (MQ=255)
                       aaTTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCt                                                <  1:10281857/66‑1 (MQ=255)
                       aaTTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTc                                              >  1:16366255/1‑68 (MQ=255)
                        cagcagttaaaagcggcggggagcgtattaatttccgcgccgcTTTTAACTGCTGAATTAATGCTTCa                                             <  1:4323650‑M2/25‑1 (MQ=255)
                        aTTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCa                                             >  1:24913437/1‑68 (MQ=255)
                        aTTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCa                                             >  1:23071139/1‑68 (MQ=255)
                        aTTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCa                                             <  1:34033127/68‑1 (MQ=255)
                          tGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAGTTAATGCTTCAAt                                           <  1:27738028/68‑1 (MQ=255)
                          tGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAAt                                           <  1:30482676/68‑1 (MQ=255)
                          tGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAAt                                           <  1:14599725/68‑1 (MQ=255)
                            cccGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATAc                                         >  1:21068633/1‑68 (MQ=255)
                            cccGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATAc                                         >  1:17455559/1‑68 (MQ=255)
                            cccGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATAc                                         >  1:27013877/1‑68 (MQ=255)
                            cccGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGATTCAATAc                                         >  1:26644350/1‑68 (MQ=255)
                              cGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAACTAATGCTTCAATACg                                        >  1:18759289/1‑67 (MQ=255)
                               taaacgcggcggggcgcgtattaattcccgcgccgcTTTAAACTGCTTAATTAATGCTTCAATACGGc                                      <  1:16864716‑M2/32‑1 (MQ=255)
                               taaacgcggcggggagcgtattaatttccgcgccgcTTTTAACTGCTGAATTAATGCTTCAATACGGc                                      <  1:15927031‑M2/32‑1 (MQ=255)
                               taaaaGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACg                                        <  1:16745065‑M1/61‑1 (MQ=255)
                               gATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGc                                      <  1:4053760/68‑1 (MQ=255)
                               gATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGc                                      <  1:32642402/68‑1 (MQ=255)
                               gATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGc                                      <  1:28480910/68‑1 (MQ=255)
                               gATACGCGGCGCGGAAATTAATACGCTCCCCGACGCTTTTAACTGCTGAATTAATGCTTCAATACGGc                                      <  1:24585215/68‑1 (MQ=255)
                                    GCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTgg                                 <  1:11951684‑M1/68‑1 (MQ=255)
                                    GCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTgg                                 >  1:25970781‑M1/1‑68 (MQ=255)
                                    GCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTgg                                 >  1:25783933‑M1/1‑68 (MQ=255)
                                    GCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTgg                                 >  1:19109798‑M1/1‑68 (MQ=255)
                                      GGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGt                                <  1:35476642‑M1/67‑1 (MQ=255)
                                              aaTTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAg                       >  1:17098771/1‑68 (MQ=255)
                                              aaTTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAg                       <  1:12367767/68‑1 (MQ=255)
                                              aaTTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAg                       >  1:13778486/1‑68 (MQ=255)
                                              aaTTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAg                       <  1:32012315/68‑1 (MQ=255)
                                                  aaTACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCAc                   <  1:1822755/68‑1 (MQ=255)
                                                   aTACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCAc                   >  1:28189599/1‑67 (MQ=255)
                                                   aTACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCAc                   >  1:11316187/1‑67 (MQ=255)
                                                   aTACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACg                  <  1:33032975/68‑1 (MQ=255)
                                                   aTACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACg                  <  1:1005539/68‑1 (MQ=255)
                                                   aTACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACg                  <  1:27232999/68‑1 (MQ=255)
                                                     aCGCTCGCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACGcc                >  1:15513485/1‑68 (MQ=255)
                                                     aCGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACGcc                >  1:12211933/1‑68 (MQ=255)
                                                     aCGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACGcc                >  1:21907682/1‑68 (MQ=255)
                                                     aCGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACGcc                >  1:1256566/1‑68 (MQ=255)
                                                     aCGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACGcc                >  1:26375461/1‑68 (MQ=255)
                                                     aCGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACGcc                >  1:33437255/1‑68 (MQ=255)
                                                     aCGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACGcc                >  1:33653226/1‑68 (MQ=255)
                                                     aCGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACGcc                >  1:29812749/1‑68 (MQ=255)
                                                      cGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACGCCa               <  1:3459211/68‑1 (MQ=255)
                                                      cGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACGCCa               >  1:24418420/1‑68 (MQ=255)
                                                       gCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACGCCaa              >  1:23001737/1‑68 (MQ=255)
                                                       gCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACGCCaa              >  1:21816121/1‑68 (MQ=255)
                                                       gCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACGCCaa              <  1:28820191/68‑1 (MQ=255)
                                                         tCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCGACGCCAGGCACGCCAAt             <  1:34875074/67‑1 (MQ=255)
                                                         tCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACGCCAAt             <  1:1356190/67‑1 (MQ=255)
                                                         tCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACGCCAAt             <  1:31080703/67‑1 (MQ=255)
                                                         tCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACGCCAAt             >  1:17701831/1‑67 (MQ=255)
                                                         tCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACGCCAAt             >  1:1786972/1‑67 (MQ=255)
                                                         tCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACGCCAAt             >  1:22448440/1‑67 (MQ=255)
                                                             cgccgcTTTTAAGTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACGCCAATCCAgg        <  1:6152699‑M2/62‑1 (MQ=255)
                                                             cgccgcTTTTAACTGGTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACGCCAATCCAgg        <  1:31893346‑M2/62‑1 (MQ=255)
                                                             cgccgcTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACGCCAATCCAgg        <  1:133434‑M2/62‑1 (MQ=255)
                                                             cgccgcTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACGCCAATCCAgg        >  1:5983731‑M2/7‑68 (MQ=255)
                                                             cgccgcTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACGCCAATCCAgg        <  1:10947640‑M2/62‑1 (MQ=255)
                                                             cgccgcTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACGCCAATCCAgg        >  1:24363903‑M2/7‑68 (MQ=255)
                                                             cgccgcTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACGCCAATCCAgg        <  1:24781968‑M2/62‑1 (MQ=255)
                                                               ccgcTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACGCCAATCCAgg        >  1:15743840‑M2/5‑66 (MQ=255)
                                                                 gcTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACGCCAATCCAGGTCTg    >  1:5616563‑M2/3‑68 (MQ=255)
                                                                   ttttAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACGCCAATCCAGGTCTGGa  <  1:23891752/68‑1 (MQ=255)
                                                                   ttttAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACGCCAATCCAGGTCTGGa  <  1:21408083/68‑1 (MQ=255)
                                                                   |                                                                   
CAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACGCCAATCCAGGTCTGGA  >  CP009273/108732‑108866

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.